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GlobalBarcoding Bibliography


Review the primary literature

For more than a decade, members of the DNA barcoding community have made prodigious contributions to the scientific literature.

Most of those publications are listed here, organized alphabetically and by year of publication.

[If you know of DNA barcoding publications that are not listed here, please send the citation to].


2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003




Aarvik, L., Karisch, T., and Marthinsen, G. (2012), ‘Review of the Afrotropical genus Dracontogena Diakonoff, 1970 (Lepidoptera, Tortricidae) with descriptions of eight new species’, Zootaxa, (3478), 345-72.

Abd-Rabou, S., et al. (2012), ‘Identification of mealybug pest species (Hemiptera: Pseudococcidae) in Egypt and France, using a DNA barcoding approach’, Bulletin of Entomological Research, 102 (5), 515-23.

Abe, H., Hayano, A., and Inoue-Murayama, M. (2012), ‘Forensic species identification of large macaws using DNA barcodes and microsatellite profiles’, Molecular Biology Reports, 39 (1), 693-99.

Allingham, Shaun (2012), ‘Amphibian conservation and DNA barcoding’, Herptile, 37 (3), 101-03 .

Ander, M., Troell, K., and Chirico, J. (2012), ‘Barcoding of biting midges in the genus Culicoides: a tool for species determination’, Medical and Veterinary Entomology.

Andersen, Jeremy C. and Mills, Nicholas J. (2012), ‘DNA Extraction from Museum Specimens of Parasitic Hymenoptera’, PLoS ONE, 7 (10), e45549.

Arca, Mariangela, et al. (2012), ‘Deciduous Trees and the Application of Universal DNA Barcodes: A Case Study on the Circumpolar Fraxinus‘, PLoS ONE, 7 (3), e34089.

Ardura, A., et al. (2012), ‘Forensic DNA analysis reveals use of high trophic level marine fish in commercial aquaculture fish meals’, Fisheries Research, 115-116 (0), 115-20.

Armenise, Laura, et al. (2012), ‘Validation of DNA barcoding as an efficient tool for taxon identification and detection of species diversity in Italian conifers’, European Journal of Forest Research, 131 (5), 1337-53.

Asmyhr, Maria G. and Cooper, Steven J. B. (2012), ‘Difficulties barcoding in the dark: the case of crustacean stygofauna from eastern Australia’, Invertebrate Systematics, 26 (6), 583-91.

Asokan, R., et al. (2012), ‘Molecular Identification and Diversity of Helopeltis antonii and Helopeltis theivora (Hemiptera: Miridae) in India’, Florida Entomologist, 95 (2), 350-58.

Astrin, Jonas J., et al. (2012), ‘Exploring diversity in cryptorhynchine weevils (Coleoptera) using distance-, character- and tree-based species delineation’, Molecular Phylogenetics and Evolution, 63 (1), 1-14.

Aubriot, Xavier, et al. (2012), ‘DNA barcoding in a biodiversity hot spot: potential value for the identification of Malagasy Euphorbia L. listed in CITES Appendices I and II’, Molecular Ecology Resources, 13 (1), 57-65.

Austin, Andrew and Mitchell, Andrew (2012), ‘Preface to “DNA Barcoding Invertebrates”‘, Invertebrate Systematics, 26 (6), iii-iii.

Avin, FarhatAhmadi, et al. (2012), ‘Molecular classification and phylogenetic relationships of selected edible Basidiomycetes species’, Molecular Biology Reports, 39 (7), 7355-64.



Baco, Amy R. and Cairns, Stephen D. (2012), ‘Comparing Molecular Variation to Morphological Species Designations in the Deep-Sea Coral Narella Reveals New Insights into Seamount Coral Ranges’, PLoS ONE, 7 (9), e45555.

Bafeel, S. O., et al. (2012), ‘DNA barcoding of arid wild plants using rbcL gene sequences’, Genet Mol Res, 11 (3), 1934-41.

Baird, Donald J. and Hajibabaei, Mehrdad (2012), ‘Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing’, Molecular Ecology, 21 (8), 2039-44.

Baker, David A. (2012), ‘DNA Barcode Identification of Black Cohosh Herbal Dietary Supplements’, Journal of AOAC International, 95 (4), 1023-34.

Balakirev, Evgeniy, Krupnova, Tatiana, and Ayala, Francisco (2012), ‘DNA variation in the phenotypically-diverse brown alga Saccharina japonica‘, BMC Plant Biology, 12 (1), 108.

Baldwin, Carole C. and Weigt, Lee A. (2012), ‘A New Species of Soapfish (Teleostei: Serranidae: Rypticus), with Redescription of R. subbifrenatus and Comments on the Use of DNA Barcoding in Systematic Studies’, Copeia, 2012 (1), 23-36.

Bañón, R., et al. (2012), ‘DNA barcoding of the genus Lepidion (Gadiformes: Moridae) with recognition of Lepidion eques as a junior synonym of Lepidion lepidion’, Molecular Ecology Resources.

Barbosa, S., et al. (2012), ‘Genetic identification of Iberian rodent species using both mitochondrial and nuclear loci: application to noninvasive sampling’, Molecular Ecology Resources, 13 (1), 43-56.

Barr, N. B., et al. (2012), ‘Molecular Identification of Ceratitis capitata (Diptera: Tephritidae) using DNA Sequences of the COI Barcode Region’, Annals of the Entomological Society of America, 105 (2), 339-50.

Basiewicz, Magdalena, et al. (2012), ‘Molecular and phenotypic characterization of Sebacina vermifera strains associated with orchids, and the description of Piriformospora williamsii sp. nov’, Fungal Biology, 116 (2), 204-13.

Baum, Bernard R. (2012), ‘A Taxonomist’s View on Genomic Authentication’, in N.J. Sucher, J.R. Hennell, and M.C. Carles (eds.), Plant DNA Fingerprinting and Barcoding (Methods in Molecular Biology, 862), 1-12.

Bazinet, Adam and Cummings, Michael (2012), ‘A comparative evaluation of sequence classification programs’, BMC Bioinformatics, 13 (1), 92.

Behounek, G., Han, H. L., and Kononenko, V. S. (2012), ‘Two new genera and three new species of the Pantheinae from East Asia and China (Lepidoptera, Noctuidae). Contribution to revision of Pantheinae VIII’, Zootaxa, 3587, 78-88.

Bejdak, P., et al. (2012), ‘[Detection and identification of filamentous fungi causing mycoses using molecular genetic methods.]’, Klin Mikrobiol Infekc Lek, 18 (4), 109-14.

Bell, D., et al. (2012), ‘DNA barcoding of European Herbertus (Marchantiopsida, Herbertaceae) and the discovery and description of a new species.’, Molecular Ecology Resources, 12 (1), 36-47.

Beltrà, A., Soto, A., and Malausa, T. (2012), ‘Molecular and morphological characterisation of Pseudococcidae surveyed on crops and ornamental plants in Spain’, Bulletin of Entomological Research, 102 (02), 165-72.

Bergsten, Johannes, et al. (2012), ‘The Effect of Geographical Scale of Sampling on DNA Barcoding’, Systematic Biology, 61 (5), 851-69.

Bhattacharjee, Maloyjo J., et al. (2012), ‘Identification and Re-Evaluation of Freshwater Catfishes through DNA Barcoding’, PLoS ONE, 7 (11), e49950.

Bienert, F., et al. (2012), ‘Tracking earthworm communities from soil DNA’, Molecular Ecology, 21 (8), 2017-30.

Bijukumar, A., et al. (2012), ‘DNA barcoding of the Bryde’s Whale Balaenoptera edeni Anderson (Cetacea: Balaenopteridae) washed ashore along Kerala coast, India’, Journal of Threatened Taxa, 4 (3), 2436-43.

Biswal, Devendra, et al. (2012), ‘Phylogenetic reconstruction in the Order Nymphaeales: ITS2 secondary structure analysis and in silico testing of maturase k (matK) as a potential marker for DNA bar coding’, BMC Bioinformatics, 13 (Suppl 17), S26.

Blacket, Mark J., Semeraro, Linda, and Malipatil, Mallik B. (2012), ‘Barcoding Queensland Fruit Flies (Bactrocera tryoni): impediments and improvements’, Molecular Ecology Resources, 12 (3), 428-36.

Blanchet, S. (2012), ‘The use of molecular tools in invasion biology: an emphasis on freshwater ecosystems’, Fisheries Management and Ecology, 19 (2), 120-32.

Blaszkowska, J. and Wojcik, A. (2012), ‘Current problems concerning parasitology and mycology with regard to diseases of the skin and its appendages’, Ann Parasitol, 58 (3), 111-23.

Boatwright, J. S., et al. (2012), ‘Progress towards DNA barcoding of invasive species in South Africa’, South African Journal of Botany, 79, 178-79.

Boehme, P., Amendt, J., and Zehner, R. (2012), ‘The use of COI barcodes for molecular identification of forensically important fly species in Germany’, Parasitology Research, 110 (6), 2325-32.

Boeters, H. D. and Knebelsberger, T. (2012), ‘Revision of selected species of Bythinella MOQUIN-TANDON 1856 from Central Europe using morphology, anatomy and DNA barcodes (Caenogastropoda: Rissooidea)’, Archiv Fur Molluskenkunde, 141 (1), 115-36.

Bondoc, O. L. and Santiago, R. C. (2012), ‘Identification of Domesticated Duck Breeds, Strains, and Hybrids (Anatiformes: Anatidae) in the Philippines Using DNA Barcodes’, Philippine Journal of Veterinary Medicine, 49 (2), 57-66.

Bondoc, O. L. and Santiago, R. C. (2012), ‘The Use of DNA Barcodes in the Evolutionary Analysis of Domestic Breeds and Strains of Chicken (Gallus gallus domesticus) in the Philippines’, Philippine Agricultural Scientist, 95 (4), 358-69.

Borges, L. M. S., et al. (2012), ‘Investigating the taxonomy and systematics of marine wood borers (Bivalvia : Teredinidae) combining evidence from morphology, DNA barcodes and nuclear locus sequences’, Invertebrate Systematics, 26 (6), 572-82.

Bosmali, Irene, et al. (2012), ‘Microsatellite and DNA-barcode regions typing combined with High Resolution Melting (HRM) analysis for food forensic uses: A case study on lentils (Lens culinaris)’, Food Research International, 46 (1), 141-47.

Bousquet, Yves (2012), ‘Description of a new species of Platynus Bonelli from the Appalachian Mountains of eastern North America (Coleoptera, Carabidae)’, ZooKeys, 163 (0), 69-81.

Bouyer, Thierry (2012), ‘Barcodes and new African Saturniidae of the genus Lobobunaea Packard, 1901 (Lepidoptera).’, Lambillionea, 112 (2), 181-94.

Boyer, Stephane, et al. (2012), ‘Sliding Window Analyses for Optimal Selection of Mini-Barcodes, and Application to 454-Pyrosequencing for Specimen Identification from Degraded DNA’, PLoS ONE, 7 (5), e38215.

Boykin, Laura M., et al. (2012), ‘DNA barcoding invasive insects: database roadblocks’, Invertebrate Systematics, 26 (6), 506-14.

Bracken-Grissom, Heather D., et al. (2012), ‘Phylogenetics links monster larva to deep-sea shrimp’, Ecology and Evolution, 2 (10), 2367-73.

Braet, Y., Ceccarelli, F. S., and Zaldivar-Riveron, A. (2012), ‘Two new species of Evaniodes Szepligeti (Hymenoptera: Braconidae: Doryctinae) from French Guiana’, Zootaxa, (3247), 52-60.

Braid, H. E., et al. (2012), ‘Preying on commercial fisheries and accumulating paralytic shellfish toxins: a dietary analysis of invasive Dosidicus gigas (Cephalopoda Ommastrephidae) stranded in Pacific Canada’, Marine Biology, 159 (1), 25-31.

Bristow, C.R., Janzen, D.H., and Hallwachs, W. (2012), ‘A review of two easily confused species of Brassolis, with a description of a new subspecies from Central America (Lepidoptera: Nymphalidae)’, Bulletin of the Allyn Museum, 165, 1-15.

Brodin, Y., et al. (2012), ‘Improving environmental and biodiversity monitoring in the Baltic Sea using DNA barcoding of Chironomidae (Diptera)’, Molecular Ecology Resources.

Brown, D. S., Jarman, S. N., and Symondson, W. O. C. (2012), ‘Pyrosequencing of prey DNA in reptile faeces: analysis of earthworm consumption by slow worms’, Molecular Ecology Resources, 12 (2), 259-66.

Brown, S.D.J., et al. (2012), ‘Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding’, Molecular Ecology Resources, 12 (3), 562-65.

Bruni, Ilaria, et al. (2012), ‘DNA Barcoding as an Effective Tool in Improving a Digital Plant Identification System: A Case Study for the Area of Mt. Valerio, Trieste (NE Italy)’, PLoS ONE, 7 (9), e43256.

Bryja, J., et al. (2012), ‘Revised occurrence of rodents from the tribe Praomyini (Muridae) in Zambia based on mitochondrial DNA analyses: implications for biogeography and conservation’, Folia Zoologica, 61 (3-4), 268-83.

Bu, Yun, et al. (2012), ‘Redescription of arenicolous dipluran Parajapyx pauliani (Diplura, Parajapygidae) and DNA barcoding analyses of Parajapyx from China’, ZooKeys, 221 (0), 19-29.

Buck, M., et al. (2012), ‘Unravelling cryptic species diversity in eastern Nearctic paper wasps, Polistes (Fuscopolistes), using male genitalia, morphometrics and DNA barcoding, with descriptions of two new species (Hymenoptera: Vespidae)’, Zootaxa, 3502, 1-48.

Butcher, B. A., et al. (2012), ‘A turbo-taxonomic study of Thai Aleiodes (Aleiodes) and Aleiodes (Arcaleiodes) (Hymenoptera: Braconidae: Rogadinae) based largely on COI barcoded specimens, with rapid descriptions of 179 new species’, Zootaxa, (3457), 1-232.

Byrne, M. and Hankinson, M. (2012), ‘Testing the variability of chloroplast sequences for plant phylogeography’, Australian Journal of Botany, 60 (7), 569-74.



Caballero, S., et al. (2012), ‘Application of multiplex PCR approaches for shark molecular identification: feasibility and applications for fisheries management and conservation in the Eastern Tropical Pacific’, Molecular Ecology Resources, 12 (2), 233-37.

Cai, Zhao-Ming, et al. (2012), ‘Testing four candidate barcoding markers in temperate woody bamboos (Poaceae: Bambusoideae)’, Journal of Systematics and Evolution, 50 (6), 527-39.

Callway, E. (2012), ‘A bloody boon for conservation’, Nature, 484 (7395), 424-25.

Carneiro, João, Pereira, Filipe, and Amorim, António (2012), ‘SPInDel: a multifunctional workbench for species identification using insertion/deletion variants’, Molecular Ecology Resources, 12 (6), 1190-95.

Carolan, James C., et al. (2012), ‘Colour Patterns Do Not Diagnose Species: Quantitative Evaluation of a DNA Barcoded Cryptic Bumblebee Complex’, PLoS ONE, 7 (1), e29251.

Casquet, J., Thebaud, C., and Gillespie, RG (2012), ‘Chelex without boiling, a rapid and easy technique to obtain stable amplifiable DNA from small amounts of ethanol-stored spiders’, Molecular Ecology Resources, 12 (1), 136-41.

Cawthorn, Donna-Mareè, Steinman, Harris Andrew, and Witthuhn, R. Corli (2012), ‘DNA barcoding reveals a high incidence of fish species misrepresentation and substitution on the South African market’, Food Research International, 46 (1), 30-40.

Ceccarelli, Fadia Sara, Sharkey, Michael J., and Zaldívar-Riverón, Alejandro (2012), ‘Species identification in the taxonomically neglected, highly diverse, neotropical parasitoid wasp genus Notiospathius (Braconidae: Doryctinae) based on an integrative molecular and morphological approach’, Molecular Phylogenetics and Evolution, 62 (1), 485-95.

Cerutti-Pereyra, Florencia, et al. (2012), ‘Identification of Rays through DNA Barcoding: An Application for Ecologists’, PLoS ONE, 7 (6), e36479.

Chacon, I. A, et al. (2012), ‘A new species of Opsiphanes Doubleday, [1849] from Costa Rica (Nymphalidae: Morphinae: Brassolini), as revealed by its DNA barcodes and habitus’, Bulletin of the Allyn Museum 166, 1-15.

Chandra, Suresh, et al. (2012), ‘DNA Bar-Coding of Indian Coldwater Fishes of Genus Schizothorax (Family: Cyprinidae) from Western Himalaya’, World Journal of Fish and Marine Sciences, 4 (4), 430-35.

Chang, Hong, et al. (2012), ‘DNA barcoding based on the mitochondrial COI gene sequences for Ips species (Coleoptera: Scolytidae)’, ACTA ENTOMOLOGICA SINICA, 55 (9), 1075-81.

Chappell, E. M., Trewick, S. A., and Morgan-Richards, M. (2012), ‘Shape and sound reveal genetic cohesion not speciation in the New Zealand orthopteran, Hemiandrus pallitarsis, despite high mitochondrial DNA divergence’, Biological Journal of the Linnean Society, 105 (1), 169-86.

Chariton, Anthony (2012), ‘Short and informative DNA products to indirectly measure vascular plant biodiversity’, Molecular Ecology, 21 (15), 3637-39.

Chaves, P.B., et al. (2012), ‘DNA barcoding meets molecular scatology: short mtDNA sequences for standardized species assignment of carnivore noninvasive samples’, Molecular Ecology Resources, 12 (1), 18-35.

Che, J., et al. (2012), ‘Universal COI primers for DNA barcoding amphibians’, Molecular Ecology Resources, 12 (2), 247-58.

Chen, Rui, Jiang, Li-Yun, and Qiao, Ge-Xia (2012), ‘The Effectiveness of Three Regions in Mitochondrial Genome for Aphid DNA Barcoding: A Case in Lachininae’, PLoS ONE, 7 (10), e46190.

Chen, Q., et al. (2012), ‘[DNA bacording of Verbenaceae medicinal plant by using ITS2 and psbA-trnH region]’, Zhongguo Zhong Yao Za Zhi, 37 (8), 1107-13.

Chen, Keli, et al. (2012), ‘Species identification of Rhododendron (Ericaceae) using the chloroplast deoxyribonucleic acid PsbA-trnH genetic marker’, 8 (29), 29-36.

Chen, S., et al. (2012), ‘[Advances of studies on new technology and method for identifying traditional Chinese medicinal materials]’, Zhongguo Zhong Yao Za Zhi, 37 (8), 1043-55.

Cheng, L., et al. (2012), ‘[DNA barcoding and species and subspecies classification within genus Carassius]’, Dongwuxue Yanjiu, 33 (5), 463-72.

Chesters, Douglas, et al. (2012), ‘The Integrative Taxonomic Approach Reveals Host Specific Species in an Encyrtid Parasitoid Species Complex’, PLoS ONE, 7 (5), e37655.

Clement, Wendy and Donoghue, Michael (2012), ‘Barcoding success as a function of phylogenetic relatedness in Viburnum, a clade of woody angiosperms’, BMC Evolutionary Biology, 12 (1), 73.

Cline, Erica (2012), ‘Marketplace substitution of Atlantic salmon for Pacific salmon in Washington State detected by DNA barcoding’, Food Research International, 45 (1), 388-93.

Coissac, Eric, Riaz, Tiayyba, and Puillandre, Nicolas (2012), ‘Bioinformatic challenges for DNA metabarcoding of plants and animals’, Molecular Ecology, 21 (8), 1834-47.

Collins, R. A. and Cruickshank, R. H. (2012), ‘The seven deadly sins of DNA barcoding’, Molecular Ecology Resources.

Collins, Rupert A., et al. (2012), ‘Barcoding’s next top model: an evaluation of nucleotide substitution models for specimen identification’, Methods in Ecology and Evolution, 3 (3), 457-65.

Collins, Rupert A., et al. (2012), ‘Barcoding and Border Biosecurity: Identifying Cyprinid Fishes in the Aquarium Trade’, PLoS ONE, 7 (1), e28381.

Conflitti, Ida M., Shields, Gerald F., and Currie, Douglas C. (2012), ‘A ‘complex’ problem: delimiting sibling species boundaries in black flies (Diptera: Simuliidae)’, The Canadian Entomologist, 144 (2), 323-36.

Core, Andrew, et al. (2012), ‘A New Threat to Honey Bees, the Parasitic Phorid Fly Apocephalus borealis‘, PLoS ONE, 7 (1), e29639.

Correa, M.C.G., et al. (2012), ‘Molecular and morphological characterization of mealybugs (Hemiptera: Pseudococcidae) from Chilean vineyards’, Bulletin of Entomological Research, 102 (05), 524-30.

Costa, EmmanuelleS, et al. (2012), ‘The Gracilariaceae Germplasm Bank of the University of São Paulo, Brazil,a DNA barcoding approach’, Journal of Applied Phycology, 24 (6), 1643-53.

Costa, F.O., et al. (2012), ‘A ranking system for reference libraries of DNA barcodes: Application to marine fish species from Portugal’, PLoS ONE, 7 (4), e35858.

Couceiro, L., et al. (2012), ‘Molecular data delineate cryptic Nassarius species and characterize spatial genetic structure of N. nitidus’, Journal of the Marine Biological Association of the United Kingdom, 92 (05), 1175-82.

Cowan, Robyn S. and Fay, Michael F. (2012), ‘Challenges in the DNA Barcoding of Plant Material’, in N.J. Sucher, J.R. Hennell, and M.C. Carles (eds.), Plant DNA Fingerprinting and Barcoding (Methods in Molecular Biology, 862), 23-33.

Crawford, Andrew J., et al. (2012), ‘DNA barcoding applied to ex situ tropical amphibian conservation programme reveals cryptic diversity in captive populations’, Molecular Ecology Resources.

Cruz-Barraza, José Antonio, et al. (2012), ‘Integrative Taxonomy and Molecular Phylogeny of Genus Aplysina (Demospongiae: Verongida) from Mexican Pacific’, PLoS ONE, 7 (8), e42049.

Cunha, Sara C., et al. (2012), ‘Isoflavone determination in spontaneous legumes identified by DNA barcodes’, Food Chemistry, 134 (4), 2262-67.

Cunha, Regina L., et al. (2012), ‘Ancient Divergence in the Trans-Oceanic Deep-Sea Shark Centroscymnus crepidater’, PLoS ONE, 7 (11), e49196.

Czechowski, Paul, et al. (2012), ‘Antarctic Tardigrada: a first step in understanding molecular operational taxonomic units (MOTUs) and biogeography of cryptic meiofauna’, Invertebrate Systematics, 26 (6), 526-38.



da Silva, Fabio Laurindo, et al. (2012), ‘Two new species of Hudsonimyia Roback, 1979 (Diptera: Chironomidae: Tanypodinae) from Neotropical Region unveiled by morphology and DNA barcoding’, Journal of Natural History, 46 (25-26), 1615-38.

Dai, Lina, et al. (2012), ‘DNA barcoding analysis of Coleoidea (Mollusca: Cephalopoda) from Chinese waters’, Molecular Ecology Resources, 12 (3), 437-47.

Dai, Qing-Yan, et al. (2012), ‘Phylogenetic Reconstruction and DNA Barcoding for Closely Related Pine Moth Species (Dendrolimus) in China with Multiple Gene Markers’, PLoS ONE, 7 (4), e32544.

Danabalan, Renita, Ponsonby, David J., and Linton, Yvonne-Marie (2012), ‘A Critical Assessment of Available Molecular Identification Tools for Determining the Status of Culex pipiens S.L. in the United Kingdom’, Journal of the American Mosquito Control Association, 28 (4s), 68-74.

Dang, Lihong and Qiao, Gexia (2012), ‘The genus Bactrothrips in China (Thysanoptera: Idolothripinae): morphological and molecular data, and a key with two new species’, Zootaxa, 3449, 47-61.

David, O., et al. (2012), ‘Coalescent-Based DNA Barcoding: Multilocus Analysis and Robustness ‘, Journal of Computational Biology, 19 (3), 271-78.

De Mattia, Fabrizio, et al. (2012), ‘A multi-marker DNA barcoding approach to save time and resources in vegetation surveys’, Botanical Journal of the Linnean Society, 169 (3), 518-29.

de Oliveira Ribeiro, Amanda, et al. (2012), ‘DNA barcodes identify marine fishes of São Paulo State, Brazil’, Molecular Ecology Resources, 12 (6), 1012-20.

de Vere, Natasha, et al. (2012), ‘DNA Barcoding the Native Flowering Plants and Conifers of Wales’, PLoS ONE, 7 (6), e37945.

Deck, John, et al. (2012), ‘Field Information Management Systems for DNA Barcoding’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 255-67.

Degtjareva, G., et al. (2012), ‘Organization of chloroplast psbA-trnH intergenic spacer in dicotyledonous angiosperms of the family umbelliferae’, Biochemistry (Moscow), 77 (9), 1056-64.

Dejean, Tony, et al. (2012), ‘Improved detection of an alien invasive species through environmental DNA barcoding: the example of the American bullfrog Lithobates catesbeianus‘, Journal of Applied Ecology, 49 (4), 953-59.

Delsinne, Thibaut, et al. (2012), ‘High species turnover of the ant genus Solenopsis (Hymenoptera : Formicidae) along an altitudinal gradient in the Ecuadorian Andes, indicated by a combined DNA sequencing and morphological approach’, Invertebrate Systematics, 26 (6), 457-69.

Deng, J. U. N., et al. (2012), ‘DNA barcoding of six Ceroplastes species (Hemiptera: Coccoidea: Coccidae) from China’, Molecular Ecology Resources, 12 (5), 791-96.

Derocles, Stephane A. P., et al. (2012), ‘A universal method for the detection and identification of Aphidiinae parasitoids within their aphid hosts’, Molecular Ecology Resources, 12 (4), 634-45.

Derocles, S.A.P., et al. (2012), ‘Identification of molecular markers for DNA barcoding in the Aphidiinae (Hym. Braconidae)’, Molecular Ecology Resources, 12 (2), 197-208.

Diaz, Patricia L., Hennell, James R., and Sucher, Nikolaus J. (2012), ‘Genomic DNA Extraction and Barcoding of Endophytic Fungi’, in N.J. Sucher, J.R. Hennell, and M.C. Carles (eds.), Plant DNA Fingerprinting and Barcoding (Methods in Molecular Biology, 862), 171-79.

Dick, ChristopherW and Webb, CampbellO (2012), ‘Plant DNA Barcodes, Taxonomic Management, and Species Discovery in Tropical Forests’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 379-93.

Dittrich-Schroder, G., et al. (2012), ‘DNA extraction techniques for DNA barcoding of minute gall-inhabiting wasps’, Molecular Ecology Resources, 12 (1), 109-15.

Docker, Margaret, Mandrak, Nicholas, and Heath, Daniel (2012), ‘Contemporary gene flow between ‘paired’ silver (Ichthyomyzon unicuspis) and northern brook (I. fossor) lampreys: implications for conservation’, Conservation Genetics, 13 (3), 823-35.

Doerder, F. Paul and Brunk, Clifford (2012), ‘Chapter 9 – Natural Populations and Inbred Strains of Tetrahymena’, in Collins Kathleen (ed.), Methods in Cell Biology (Volume 109: Academic Press), 277-300.

Dong, Wenpan, et al. (2012), ‘Highly Variable Chloroplast Markers for Evaluating Plant Phylogeny at Low Taxonomic Levels and for DNA Barcoding’, PLoS ONE, 7 (4), e35071.

Duarte, Sofia, et al. (2012), ‘Preliminary Insights into the Phylogeography of Six Aquatic Hyphomycete Species’, PLoS ONE, 7 (9), e45289.

Dudgeon, C. L., et al. (2012), ‘A review of the application of molecular genetics for fisheries management and conservation of sharks and rays’, Journal of Fish Biology, 80 (5), 1789-843.

Duggan, I. C., et al. (2012), ‘Identifying invertebrate invasions using morphological and molecular analyses: North American Daphnia ‘pulex’ in New Zealand fresh waters’, Aquatic Invasions, 7 (4), 585-90.

Duminil, Jérôme, et al. (2012), ‘Testing species delimitation in sympatric species complexes: The case of an African tropical tree, Carapa spp. (Meliaceae)’, Molecular Phylogenetics and Evolution, 62 (1), 275-85.

Dupuis, Julian R., Roe, Amanda D., and Sperling, Felix A. H. (2012), ‘Multi-locus species delimitation in closely related animals and fungi: one marker is not enough’, Molecular Ecology, 21 (18), 4422-36.

Dusfour, Isabelle, et al. (2012), ‘Confirmation of the Occurrence of Anopheles (Nyssorhynchus) marajoara in French Guiana’, Journal of the American Mosquito Control Association, 28 (4), 309-11.



Eberhardt, Ursula (2012), ‘Methods for DNA Barcoding of Fungi’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 183-205.

Elderkin, Curt L., et al. (2012), ‘DNA barcoding to confirm morphological traits and determine relative abundance of burrowing mayfly species in western Lake Erie’, Journal of Great Lakes Research, 38 (1), 180-86.

Elmeer, K., et al. (2012), ‘DNA barcoding of Oryx leucoryx using the mitochondrial cytochrome C oxidase gene’, Genetics and Molecular Research, 11 (1), 539-47.

Elzinga, J. A., et al. (2012), ‘Low parasitism rates in parthenogenetic bagworm moths do not support the parasitoid hypothesis for sex’, Journal of Evolutionary Biology, 25 (12), 2547-58.

Epp, Laura S., et al. (2012), ‘New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems’, Molecular Ecology, 21 (8), 1821-33.

Erickson, David L and Driskell, Amy C (2012), ‘Construction and Analysis of Phylogenetic Trees Using DNA Barcode Data’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 395-408.

Erickson, David L. and Kress, W. John (2012), ‘Future Directions’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 459-65.

Erpenbeck, Dirk, et al. (2012), ‘The phylogeny of halichondrid demosponges: past and present re-visited with DNA-barcoding data’, Organisms Diversity & Evolution, 12 (1), 57-70.

Evans, Nathaniel and Paulay, Gustav (2012), ‘DNA Barcoding Methods for Invertebrates’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 47-77.



Fazekas, Aron J., et al. (2012), ‘DNA Barcoding Methods for Land Plants’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 223-52.

Filipowicz, Natalia, Nee, Michael, and Renner, Susanne (2012), ‘Description and molecular diagnosis of a new species of Brunfelsia (Solanaceae) from the Bolivian and Argentinean Andes’, PhytoKeys, 10 (0), 83-94.

Fisch-Muller, S., et al. (2012), ‘Diversity of the Ancistrini (Siluriformes: Loricariidae) from the Guianas: the Panaque group, a molecular appraisal with descriptions of new species’, Cybium, 36 (1), 163-93.

Fitzcharles, E. M. (2012), ‘Rapid discrimination between four Antarctic fish species, genus Macrourus, using HRM analysis’, Fisheries Research, 127-128 (0), 166-70.

Fothergill, A. W., Sutton, D. A., and Wickes, B. L. (2012), ‘The US perspective on DNA barcoding of pathogenic fungi’, Mycoses, 55, 47-47.

Fournier, Denis, et al. (2012), ‘Genetic Structure, Nestmate Recognition and Behaviour of Two Cryptic Species of the Invasive Big-Headed Ant Pheidole megacephala‘, PLoS ONE, 7 (2), e31480.

Frederico, Renata G., et al. (2012), ‘Phylogeography and conservation genetics of the Amazonian freshwater stingray Paratrygon aiereba Müller & Henle, 1841 (Chondrichthyes: Potamotrygonidae)’, Neotropical Ichthyology, 10, 71-80.

Fregin, Silke, et al. (2012), ‘Pitfalls in comparisons of genetic distances: A case study of the avian family Acrocephalidae’, Molecular Phylogenetics and Evolution, 62 (1), 319-28.



Gabriel, F., Noel, T., and Accoceberry, I. (2012), ‘Lindnera (Pichia) fabianii blood infection after mesenteric ischemia’, Med Mycol, 50 (3), 310-14.

Gaikwad, S. S., et al. (2012), ‘DNA barcoding of nymphalid butterflies (Nymphalidae: Lepidoptera) from Western Ghats of India’, Molecular Biology Reports, 39 (3), 2375-83.

Galan, Maxime, Pagès, Marie, and Cosson, Jean-François (2012), ‘Next-Generation Sequencing for Rodent Barcoding: Species Identification from Fresh, Degraded and Environmental Samples’, PLoS ONE, 7 (11), e48374.

Galimberti, Andrea, et al. (2012), ‘Integrated Operational Taxonomic Units (IOTUs) in Echolocating Bats: A Bridge between Molecular and Traditional Taxonomy’, PLoS ONE, 7 (6), e40122.

Galimberti, A., et al. (2012), ‘Integrative taxonomy at work: DNA barcoding of taeniids harboured by wild and domestic cats’, Molecular Ecology Resources, 12 (3), 403-13.

Gamboa, M., et al. (2012), ‘A molecular approach to identifying the natural prey of the African creeping water bug Naucoris, a potential reservoir of Mycobacterium ulcerans‘, Journal of Insect Science, 12, 2-2.

Ganopoulos, Ioannis, Madesis, Panagiotis, and Tsaftaris, Athanasios (2012), ‘Universal ITS2 Barcoding DNA Region Coupled with High-Resolution Melting (HRM) Analysis for Seed Authentication and Adulteration Testing in Leguminous Forage and Pasture Species’, Plant Molecular Biology Reporter, 30 (6), 1322-28.

Ganopoulos, Ioannis, et al. (2012), ‘Barcode High Resolution Melting (Bar-HRM) analysis for detection and quantification of PDO ‘Fava Santorinis’ (Lathyrus clymenum) adulterants’, Food Chemistry, 133 (2), 505-12.

Gariepy, T. D., et al. (2012), ‘Identifying the last supper: utility of the DNA barcode library for bloodmeal identification in ticks’, Molecular Ecology Resources, 12 (4), 646-52.

Gavazzi, Floriana, et al. (2012), ‘Technical improvement of the TBP (tubulin-based polymorphism) method for plant species detection, based on capillary electrophoresis’, ELECTROPHORESIS, 33 (18), 2840-51.

Genovese, G., et al. (2012), ‘In vitro evaluation of antibacterial activity of Asparagopsis taxiformis from the Straits of Messina against pathogens relevant in aquaculture’, Marine Environmental Research, 73 (0), 1-6.

Gentekaki, Eleni and Lynn, Denis (2012), ‘Spatial genetic variation, phylogeography and barcoding of the peritrichous ciliate Carchesium polypinum‘, European Journal of Protistology, 48 (4), 305-13.

Geoffroy, Alexandre, Le Gall, Line, and Destombe, Christophe (2012), ‘Cryptic introduction of the red alga Polysiphonia morrowii Harvey (Rhodomelaceae, Rhodophyta) in the North Atlantic Ocean highlighted by a DNA barcoding approach’, Aquatic Botany, 100 (0), 67-71.

Gibson, Cara M., et al. (2012), ‘Integrative Taxonomy for Continental-Scale Terrestrial Insect Observations’, PLoS ONE, 7 (5), e37528.

Giraldo, C. E. and Uribe, S. I. (2012), ‘Taxonomy of Mechanitis (F.) (Lepidoptera: Nymphalidae) from the West Colombian Andes: an Integrative Approach’, Neotropical Entomology, 41 (6), 472-84.

Gismondi, Angelo, et al. (2012), ‘Identification of ancient Olea europaea L. and Cornus mas L. seeds by DNA barcoding’, Comptes Rendus Biologies, 335 (7), 472-79.

Gleason, L. U. and Burton, R. S. (2012), ‘High-throughput molecular identification of fish eggs using multiplex suspension bead arrays’, Molecular Ecology Resources, 12 (1), 57-66.

Glowska, E., Dragun-Damian, A., and Dabert, J. (2012), ‘Picobia dziabaszewskii sp nov (Acari, Syringophilidae)-combined description (morphology with DNA barcode data) of a new quill mite species parasitizing Garrulax formosus (Passeriformes: Leiothrichidae)’, Zootaxa, (3224), 57-61.

Glowska, E., Dragun-Damian, A., and Dabert, J. (2012), ‘A new quill mite Syringophiloidus pseudonigritae sp nov (Prostigmata, Syringophilidae) parasitizing Pseudonigrita arnaudi (Passeriformes, Ploceidae)-a combined description using morphology and DNA barcode data’, Zootaxa, 3532, 64-68.

Golding, Nick, et al. (2012), ‘West Nile virus vector Culex modestus established in southern England’, Parasites & Vectors, 5 (1), 32.

Gopalan, Sujith V., et al. (2012), ‘Morphology of Indirana semipalmata (Boulenger, 1882) (Amphibia; Anura) adults and tadpoles from the Western Ghats, India’, Herpetology Notes, 5, 263-73.

Gou, H. T., et al. (2012), ‘A DNA barcode for Piroplasmea’, Acta Tropica, 124 (1), 92-97.

Govindaraghavan, Suresh, Hennell, James R., and Sucher, Nikolaus J. (2012), ‘From classical taxonomy to genome and metabolome: Towards comprehensive quality standards for medicinal herb raw materials and extracts’, Fitoterapia, 83 (6), 979-88.

Grabowski, M., et al. (2012), ‘Cryptic invasion of Baltic lowlands by freshwater amphipod of Pontic origin’, Aquatic Invasions, 7 (3), 337-46.

Graham, M.R., et al. (2012), ‘Molecular and morphological evidence support the elevation of Euscorpius germanus croaticus Di Caporiacco, 1950 (Scorpiones: Euscorpiidae) to E. croaticus stat. nov., a rare species from Croatia.’, Revista Ibérica de Aracnologia, 21, 41-50.

Graham, M.R., et al. (2012), ‘Euscorpius sicanus (Scorpiones: Euscorpiidae) from Tunisia: DNA barcoding confirms ancient disjunctions across the Mediterranean Sea’, Serket, 13 (1/2), 16-26.

Green, Jayne, et al. (2012), ‘Transgenic Potatoes for Potato Cyst Nematode Control Can Replace Pesticide Use without Impact on Soil Quality’, PLoS ONE, 7 (2), e30973.

Grinsted, Lena, Agnarsson, Ingi, and Bilde, Trine (2012), ‘Subsocial behaviour and brood adoption in mixed-species colonies of two theridiid spiders’, Naturwissenschaften, 99 (12), 1021-30.

Gross, Michael (2012), ‘Barcoding biodiversity’, Current biology, 22 (3), R73-R76.

Guan, Z., Han, B. P., and Dumont, H. J. (2012), ‘Atrocalopteryx melli orohainani ssp. nov. on the island of Hainan, China (Zygoptera: Calopterygidae)’, Odonatologica, 41 (1), 37-42.

Guillou, Laure, et al. (2012), ‘The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy’, Nucleic Acids Research, 41 (D1), D597-D604.

Guo, Y. D., et al. (2012), ‘Identification of forensically important flesh flies based on a shorter fragment of the cytochrome oxidase subunit I gene in China’, Medical and Veterinary Entomology, 26 (3), 307-13.



Haas, A., et al. (2012), ‘Description of three Rhacophorus tadpoles (Lissamphibia: Anura: Rhacophoridae) from Sarawak, Malaysia (Borneo)’, Zootaxa, (3328), 1-19.

Hajibabaei, Mehrdad (2012), ‘The golden age of DNA metasystematics’, Trends in Genetics.

Hajibabaei, Mehrdad and McKenna, Charly (2012), ‘DNA Mini-barcodes’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 339-53.

Hajibabaei, Mehrdad, et al. (2012), ‘Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol’, BMC Ecology, 12 (1), 28.

Han, Jian-Ping, et al. (2012), ‘Comparison of four DNA barcodes in identifying certain medicinal plants of Lamiaceae’, Journal of Systematics and Evolution, 50 (3), 227-34.

Han, J., et al. (2012), ‘[Comparison of DNA barcoders in identifying medicinal materials]’, Zhongguo Zhong Yao Za Zhi, 37 (8), 1056-61.

Hansen, J. A., et al. (2012), ‘Molecular Identification of Synanthedonini Members (Lepidoptera: Sesiidae) Using Cytochrome Oxidase I’, Annals of the Entomological Society of America, 105 (4), 520-28.

Hao, D. C., et al. (2012), ‘Evaluation of the chloroplast barcoding markers by mean and smallest interspecific distances’, Pakistan Journal of Botany, 44 (4), 1271-74.

Harvey, F. S. B., et al. (2012), ‘Molecular and morphological characterisation of new species in the trapdoor spider genus Aname (Araneae: Mygalomorphae: Nemesiidae) from the Pilbara bioregion of Western Australia’, Zootaxa, (3383), 15-38.

Haye, Pilar A., et al. (2012), ‘Authentication of commercialized crab-meat in Chile using DNA Barcoding’, Food Control, 25 (1), 239-44.

He, Yang, et al. (2012), ‘Authentication of Angelica anomala Avé-Lall cultivars through DNA barcodes’, Mitochondrial DNA, 23 (2), 100-05.

Heinrichs, Guido, de Hoog, G. Sybren, and Haase, Gerhard (2012), ‘Barcode Identifiers as a Practical Tool for Reliable Species Assignment of Medically Important Black Yeast Species’, Journal of Clinical Microbiology, 50 (9), 3023-30.

Hemery, L.G., et al. (2012), ‘Comprehensive sampling reveals circumpolarity and sympatry in seven mitochondrial lineages of the Southern Ocean crinoid species Promachocrinus kerguelensis (Echinodermata)’, Molecular Ecology, 21 (10), 2502–18.

Hernández-Dávila, A., et al. (2012), ‘DNA barcoding and genetic diversity of phyllostomid bats from the Yucatan Peninsula with comparisons to Central America’, Molecular Ecology Resources, 12 (4), 590-97.

Hernandez-Roldan, J. L., et al. (2012), ‘Comparative analysis and taxonomic use of the morphology of immature stages and natural history traits in European species of Pyrgus Hubner (Lepidoptera: Hesperiidae, Pyrginae)’, Zootaxa, (3470), 1-71.

Hernandez-Triana, L. M., et al. (2012), ‘DNA barcodes reveal cryptic genetic diversity within the blackfly subgenus Trichodagmia Enderlein (Diptera: Simuliidae: Simulium) and related taxa in the New World’, Zootaxa, 3514, 43-69.

Herrera, S., Shank, T. M., and Sánchez, J. A. (2012), ‘Spatial and temporal patterns of genetic variation in the widespread antitropical deep-sea coral Paragorgia arborea‘, Molecular Ecology, 21 (24), 6053-67.

Hiiesalu, Inga, et al. (2012), ‘Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing’, Molecular Ecology, 21 (8), 2004-16.

Hill, Ryan I., et al. (2012), ‘Ecologically relevant cryptic species in the highly polymorphic Amazonian butterfly Mechanitis mazaeus s.l. (Lepidoptera: Nymphalidae; Ithomiini)’, Biological Journal of the Linnean Society, 106 (3), 540-60.

Hirschfeld, M., et al. (2012), ‘Tadpole descriptions of three Cardioglossa species from southwestern Cameroon (Amphibia: Anura: Arthroleptidae)’, Salamandra, 48 (3), 147-56.

Ho, H.-C., Chang, C.-H. , and Shao, K.-T. (2012), ‘Two new sandperches (Perciformes: Pinguipedidae: Parapercis) from South China Sea, based on morphology and DNA barcoding’, The Raffles Bulletin of Zoology, 60 (1), 163-72.

Hoef-Emden, Kerstin (2012), ‘Pitfalls of Establishing DNA Barcoding Systems in Protists: The Cryptophyceae as a Test Case’, PLoS ONE, 7 (8), e43652.

Hogner, Silje, et al. (2012), ‘Deep sympatric mitochondrial divergence without reproductive isolation in the common redstart Phoenicurus phoenicurus‘, Ecology and Evolution, 2 (12), 2974-88.

Holtken, A. M., et al. (2012), ‘Development of DNA-based methods to identify CITES-protected timber species: a case study in the Meliaceae family’, Holzforschung, 66 (1), 97-104.

Homola, Jared J., et al. (2012), ‘Genetic identification of two putative world record Michigan salmonids resolves stakeholder and manager questions’, Journal of Great Lakes Research, 38 (1), 176-79.

Hoyos, R., Uribe, S., and Velez, I. (2012), ‘Typification of colombian specimens of Lutzomyia longipalpis (Diptera: Psychodidae) by “Barcoding”‘, Revista Colombiana De Entomologia, 38 (1), 134-40.

Huang, Chien-Hsun, Chang, Mu-Tzu, and Huang, Lina (2012), ‘Species identification of Wickerhamomyces anomalus and related taxa using β-tubulin (β-tub) DNA barcode marker’, Yeast, 29 (12), 531-35.

Huang, S., et al. (2012), ‘A New Species of the Genus Elaphe (Squamata: Colubridae) from Zoige County, Sichuan, China’, Asian Herpetological Research, 3 (1), 38-45.

Hubert, Nicolas, et al. (2012), ‘Cryptic Diversity in Indo-Pacific Coral-Reef Fishes Revealed by DNA-Barcoding Provides New Support to the Centre-of-Overlap Hypothesis’, PLoS ONE, 7 (3), e28987.

Huelsken, Thomas, et al. (2012), ‘Systematics and phylogenetic species delimitation within Polinices s.l. (Caenogastropoda: Naticidae) based on molecular data and shell morphology’, Organisms Diversity & Evolution, 12 (4), 349-75.

Huemer, P. (2012), ‘Der Slowenische Grasbär (Spiris slovenica) – eine Neuentdeckung für Österreich (Lepidoptera, Erebidae: Arctiinae)’, in Wolfgang Meighörner (ed.), Wissenschaftliches Jahrbuch der Tiroler Landesmuseen 2012 (Studienverlag).

Huemer, Peter and Hebert, Paul D. N. (2012), ‘DNA barcoding of butterflies (Lepidoptera) in forest areas of South Tyrol (IT01 Ritten and IT02 Montiggl).’, Forest Observer, 6, 75-98.

Huemer, Peter and Mutanen, M. (2012), ‘Taxonomy of spatially disjunct alpine Teleiopsis albifemorella s. lat. (Lepidoptera: Gelechiidae) revealed by molecular data and morphology, how many species are there?’, Zootaxa, 3580, 1-23.

Huemer, P., Zlatkov, B., and Baixeras, J. (2012), ‘Dichrorampha dinarica, new species, a century of confusion in European lepidopterology (Lepidoptera: Tortricidae) resolved by combining morphology and DNA barcoding’, Zootaxa, (3389), 41-50.

Huxley-Jones, Elizabeth, et al. (2012), ‘Use of DNA Barcoding to Reveal Species Composition of Convenience Seafood’, Conservation Biology, 26 (2), 367-71.



Iglésias, Samuel Paco and Lévy-Hartmann, Lauriana (2012), ‘Bathyraja leucomelanos, a new species of softnose skate (Chondrichthyes: Arhynchobatidae) from New Caledonia’, Ichthyological Research, 59 (1), 38-48.

Iglésias, Samuel Paco, Dettai, A., and Ozouf-Costaz, C. (2012), ‘Barbapellis pterygalces, new genus and new species of a singular eelpout (Zoarcidae: Teleostei) from the Antarctic deep waters’, Polar Biology, 35 (2), 215-20.

Ihrmark, Katarina, et al. (2012), ‘New primers to amplify the fungal ITS2 region – evaluation by 454-sequencing of artificial and natural communities’, FEMS Microbiology Ecology, 82 (3), 666-77.

Ivanova, Natalia V., Clare, Elizabeth L., and Borisenko, Alex V. (2012), ‘DNA Barcoding in Mammals’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 153-82.

Jacquet, FranÇOis, et al. (2012), ‘Barcoding, molecular taxonomy, and exploration of the diversity of shrews (Soricomorpha: Soricidae) on Mount Nimba (Guinea)’, Zoological Journal of the Linnean Society, 166 (3), 672-87.

Januario, B. B., et al. (2012), ‘DNA barcoding to characterize Brazilian species of Senna, Cassia and Casearia‘, Planta Medica, 78 (11), PE4.

Janzen, Daniel H., et al. (2012), ‘What happens to the traditional taxonomy when a well-known tropical saturniid moth fauna is DNA barcoded?’, Invertebrate Systematics, 26 (6), 478-505.

Jeon, Hyung-Bae, Choi, Seung-Ho, and Suk, Ho Young (2012), ‘Exploring the Utility of Partial Cytochrome c Oxidase Subunit 1 for DNA Barcoding of Gobies’, Animal Systematics Evolution and Diversity, 28 (4), 269-78.

Jia, W. Z., et al. (2012), ‘Advances in the study of helminth mitochondrial genomes and their associated applications’, Chinese Science Bulletin, 57 (1), 54-67.

Jian, Li, et al. (2012), ‘Integration of Multiple Methods to Identify Major Wild Bird Species around Qinghai Lake’, in Egui Zhu and Sabo Sambath (eds.), Information Technology and Agricultural Engineering (Advances in Intelligent and Soft Computing, 134: Springer Berlin Heidelberg), 779-88.

Jin, Qian, He, Li-Jun, and Zhang, Ai-Bing (2012), ‘A Simple 2D Non-Parametric Resampling Statistical Approach to Assess Confidence in Species Identification in DNA Barcoding: An Alternative to Likelihood and Bayesian Approaches’, PLoS ONE, 7 (12), e50831.

Johnson, J. W. and White, W. T. (2012), ‘Parapercis pariomaculata (Perciformes: Pinguipedidae), a new species of sandperch from Lombok and Bali, Indonesia and remarks on the validity of P. quadrispinosa (Weber 1913)’, Zootaxa, (3319), 57-68.

Joo, Sungbae and Park, Sangkyu (2012), ‘Identification of bird species and their prey using DNA barcode on feces from Korean traditional village groves and forests (maeulsoop)’, Animal Cells and Systems, 16 (6), 488-97.

Joomun, N., Ganeshan, S., and Dookun-Saumtally, A. (2012), ‘Identification of three armyworm species (Lepidoptera: Noctuidae) using DNA barcodes and restriction enzyme digestion’, International Sugar Journal, 114 (1361), 344-49.

Jorger, Katharina, et al. (2012), ‘Barcoding against a paradox? Combined molecular species delineations reveal multiple cryptic lineages in elusive meiofaunal sea slugs’, BMC Evolutionary Biology, 12 (1), 245.



Kadarusman, et al. (2012), ‘Cryptic Diversity in Indo-Australian Rainbowfishes Revealed by DNA Barcoding: Implications for Conservation in a Biodiversity Hotspot Candidate’, PLoS ONE, 7 (7), e40627.

Kaila, L. and Mutanen, M. (2012), ‘DNA barcoding and morphology support the division of Elachista nuraghella sensu auctorum (Lepidoptera: Elachistidae: Elachistinae) into two vicariant species’, Zootaxa, (3343), 57-68.

Kane, Nolan, et al. (2012), ‘Ultra-barcoding in cacao (Theobroma spp.; Malvaceae) using whole chloroplast genomes and nuclear ribosomal DNA’, American Journal of Botany, 99 (2), 320-29.

Kang, T. H., et al. (2012), ‘Integrative taxonomy of Asiopodabrus fragiliformis (Kang and Kim, 2000) (Coleoptera: Cantharidae) and its related species’, Zootaxa, (3259), 1-33.

Kashiwagi, Tom, et al. (2012), ‘The genetic signature of recent speciation in manta rays (Manta alfredi and M. birostris)’, Molecular Phylogenetics and Evolution, 64 (1), 212-18.

Kehlmaier, Christian, Michalko, Radek, and Korenko, Stanislav (2012), ‘Ogcodes fumatus (Diptera: Acroceridae) reared from Philodromus cespitum (Araneae: Philodromidae), and first evidence of Wolbachia Alphaproteobacteria in Acroceridae’, Annales Zoologici, 62 (2), 281-86.

Keskin, Emre and Atar, Hasan Huseyin (2012), ‘Genetic structuring of European anchovy (Engraulis encrasicolus) populations through mitochondrial DNA sequences’, Mitochondrial DNA, 23 (2), 62-69.

Keskin, E. and Atar, H. H. (2012), ‘Molecular identification of fish species from surimi-based products labeled as Alaskan pollock’, Journal of Applied Ichthyology, 28 (5), 811-14.

Khamis, Fathiya M., et al. (2012), ‘Taxonomic Identity of the Invasive Fruit Fly Pest, Bactrocera invadens: Concordance in Morphometry and DNA Barcoding’, PLoS ONE, 7 (9), e44862.

Kim, Sungmin, et al. (2012), ‘A DNA barcode library for Korean Chironomidae (Insecta: Diptera) and indexes for defining barcode gap’, Molecules and Cells, 33 (1), 9-17.

Kim, Dae-Won, et al. (2012), ‘DNA Barcoding of Fish, Insects, and Shellfish in Korea’, Genomics Inform, 10 (3), 206-11.

King, Rachael A., et al. (2012), ‘Divergent Molecular Lineages and Not-So-Cryptic Species: The First Descriptions of Stygobitic Chiltoniid Amphipods (Talitroidea: Chiltoniidae) from Western Australia’, Journal of Crustacean Biology, 32 (3), 465-88.

Kiss, Levente (2012), ‘Limits of nuclear ribosomal DNA internal transcribed spacer (ITS) sequences as species barcodes for Fungi’, Proceedings of the National Academy of Sciences, 109 (27), E1811.

Klarica, J., et al. (2012), ‘Comparing four mitochondrial genes in earthworms – Implications for identification, phylogenetics, and discovery of cryptic species’, Soil Biology & Biochemistry, 45, 23-30.

Knebelsberger, Thomas and Stöger, Isabella (2012), ‘DNA Extraction, Preservation, and Amplification’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 311-38.

Knee, Wayne, et al. (2012), ‘Cryptic species of mites (Uropodoidea: Uroobovella spp.) associated with burying beetles (Silphidae: Nicrophorus): the collapse of a host generalist revealed by molecular and morphological analyses’, Molecular Phylogenetics and Evolution.

Knee, Wayne, et al. (2012), ‘Species Boundaries and Host Range of Tortoise Mites (Uropodoidea) Phoretic on Bark Beetles (Scolytinae), Using Morphometric and Molecular Markers’, PLoS ONE, 7 (10), e47243.

Knox, M.A., et al. (2012), ‘Mitochondrial DNA (COI) analyses reveal that amphipod diversity is associated with environmental heterogeneity in deep-sea habitats ‘, Molecular Ecology, 21 (19), 4885-4897.

Köhler, Frank and Johnson, Michael S. (2012), ‘Species limits in molecular phylogenies: a cautionary tale from Australian land snails (Camaenidae: Amplirhagada Iredale, 1933)’, Zoological Journal of the Linnean Society, 165 (2), 337-62.

Kool, Anneleen, et al. (2012), ‘Molecular Identification of Commercialized Medicinal Plants in Southern Morocco’, PLoS ONE, 7 (6), e39459.

Koopman, Wim J. M., et al. (2012), ‘Botanical DNA evidence in criminal cases: Knotgrass (Polygonum aviculare L.) as a model species’, Forensic Science International: Genetics, 6 (3), 366-74.

Kosakyan, Anush, et al. (2012), ‘Using DNA-barcoding for sorting out protist species complexes: A case study of the Nebela tincta-collaris-bohemica group (Amoebozoa; Arcellinida, Hyalospheniidae)’, European Journal of Protistology.

Kosakyan, Anush, et al. (2012), ‘COI Barcoding of Nebelid Testate Amoebae (Amoebozoa: Arcellinida): Extensive Cryptic Diversity and Redefinition of the Hyalospheniidae Schultze’, Protist, 163 (3), 415-34.

Kozol, Robert, Blanco-Bercial, Leocadio, and Bucklin, Ann (2012), ‘Multi-Gene Analysis Reveals a Lack of Genetic Divergence between Calanus agulhensis and C. sinicus (Copepoda; Calanoida)’, PLoS ONE, 7 (10), e45710.

Kress, W. John and Erickson, David L. (2012), ‘DNA Barcodes: Methods and Protocols’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (858: Humana Press).

Kress, W. John, Lopez, Ida C, and Erickson, David L (2012), ‘Generating Plant DNA Barcodes for Trees in Long-Term Forest Dynamics Plots’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 441-58.

Krishna Krishnamurthy, P. and Francis, Robert A (2012), ‘A critical review on the utility of DNA barcoding in biodiversity conservation’, Biodiversity and Conservation, 21 (8), 1901-19.

Krizanauskiene, A., et al. (2012), ‘Haemoproteus nucleocondensus n. sp (Haemosporida, Haemoproteidae) from a Eurasian songbird, the Great Reed Warbler Acrocephalus arundinaceus‘, Zootaxa, (3441), 36-46.

Krüger, Manuela, et al. (2012), ‘Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species level’, New Phytologist, 193 (4), 970-84.

Kruskop, Sergei V., et al. (2012), ‘Genetic Diversity of Northeastern Palaearctic Bats as Revealed by DNA Barcodes’, Acta Chiropterologica, 14 (1), 1-14.

Kubisz, D., et al. (2012), ‘Molecular barcoding for central-eastern European Crioceris leaf-beetles (Coleoptera: Chrysomelidae)’, Central European Journal of Biology, 7 (1), 69-76.

Kucera, Hana and Saunders, Gary W. (2012), ‘A survey of Bangiales (Rhodophyta) based on ultiple molecular markers reveals cryptic diversity’, Journal of Phycology, 48 (4), 869-82.

Kumar, N. Pradeep, Srinivasan, R., and Jambulingam, P. (2012), ‘DNA barcoding for identification of sand flies (Diptera: Psychodidae) in India’, Molecular Ecology Resources, 12 (3), 414-20.

Kumar, C. P., et al. (2012), ‘Limit of DNA Barcode in Delineating Penaeus monodon and in its Developing Stages’, Sains Malaysiana, 41 (12), 1527-33.

Kuzmina, Maria, et al. (2012), ‘Identification of the vascular plants of Churchill, Manitoba, using a DNA barcode library’, BMC Ecology, 12 (1), 25.

Kvamme, Torstein, Wallin, Henrik, and Kvie, Kjersti S. (2012), ‘Taxonomy and DNA barcoding of Stenostola ferrea (Schrank, 1776) and S. dubia (Laicharting, 1784) (Coleoptera, Cerambycidae, Saperdini)’, Norwegian Journal of Entomology, 59 (1), 78-87.

Kvie, Kjersti S., et al. (2012), ‘Deep sympatric mtDNA divergence in the autumnal moth (Epirrita autumnata)’, Ecology and Evolution, 3 (1), 126-44.

Kwon, Young Soo, et al. (2012), ‘Low resolution of mitochondrial COI barcodes for identifying species of the genus Larus (Charadriiformes: Laridae)’, Mitochondrial DNA, 23 (2), 157-66.

Kwong, Shiyang, Srivathsan, Amrita, and Meier, Rudolf (2012), ‘An update on DNA barcoding: low species coverage and numerous unidentified sequences’, Cladistics, 28 (6), 639-44.

Kwong, Shiyang, et al. (2012), ‘Is the COI barcoding gene involved in speciation through intergenomic conflict?’, Molecular Phylogenetics and Evolution, 62 (3), 1009-12.



Laetsch, Dominik, et al. (2012), ‘The phylogenetics of Anguillicolidae (Nematoda: Anguillicolidea), swimbladder parasites of eels’, BMC Evolutionary Biology, 12 (1), 60 .

Lankau, Emily W., Hong, Pei-Ying, and Mackie, Roderick I. (2012), ‘Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas’, Molecular Ecology, 21 (7), 1779-88 .

Larned, Scott T. (2012), ‘Phreatic groundwater ecosystems: research frontiers for freshwater ecology’, Freshwater Biology, 57 (5), 885-906 .

Lassen, Sandra, Nielsen, Soren, and Kristensen, Michael (2012), ‘Identity and diversity of blood meal hosts of biting midges (Diptera: Ceratopogonidae: Culicoides Latreille) in Denmark’, Parasites & Vectors, 5 (1), 143.

Lautrédou, A. C., et al. (2012), ‘Phylogenetic footprints of an Antarctic radiation: the Trematominae (Notothenioidei, Teleostei)’, Molecular Phylogenetics and Evolution.

Lee, W. and Lee, S. (2012), ‘Unexpected problem in aphid DNA barcoding by universal primers’, Entomological Science, 15 (1), 121-26 .

Lee, Yong-Hyun, San-an, Wu, and Suh, Soo-Jung (2012), ‘Notes on the Indian wax scale, Ceroplastes ceriferus (Fabricius), from Korea (Hemiptera: Coccidae)’, Korean Journal of Applied Entomology, 51 (2), 157-62 .

Lee, Gunsup, et al. (2012), ‘Development of DNA chip for verification of 25 microalgae collected from southern coastal region in Korea’, BioChip Journal, 6 (4), 325-34 .

Lee, Wonhoon, et al. (2012), ‘Barcoding forest insect pests in South Korea: Constructing a basic endemic species dataset’, Journal of Asia-Pacific Entomology, 15 (3), 363-68 .

Lefoulon, Emilie, et al. (2012), ‘A new type F Wolbachia from Splendidofilariinae (Onchocercidae) supports the recent emergence of this supergroup’, International Journal for Parasitology, 42 (11), 1025-36 .

Leite, L. A. R. (2012), ‘Mitochondrial pseudogenes in insect DNA barcoding: differing points of view on the same issue’, Biota Neotropica, 12 (3), 301-08 .

León-Romero, Yatzil, Mejía, Omar, and Soto-Galera, Eduardo (2012), ‘DNA barcoding reveals taxonomic conflicts in the Herichthys bartoni species group (Pisces: Cichlidae)’, Molecular Ecology Resources, 12 (6), 1021-26 .

Leray, M., et al. (2012), ‘Moorea BIOCODE barcode library as a tool for understanding predator-prey interactions: insights into the diet of common predatory coral reef fishes’, Coral Reefs, 31 (2), 383-88 .

Levitz, S., et al. (2012), ‘Environmental epidemiology of intestinal schistosomiasis and genetic diversity of Schistosoma mansoni infections in snails at Bugoigo village, Lake Albert’, Acta Tropica.

Li, H. Q., et al. (2012), ‘Evaluation of six candidate DNA barcoding loci in Ficus (Moraceae) of China’, Molecular Ecology Resources, 12 (5), 783-90 .

Li, Chi Pang, et al. (2012), ‘Analyzing Multi-locus Plant Barcoding Datasets with a Composition Vector Method Based on Adjustable Weighted Distance’, PLoS ONE, 7 (7), e42154.

Li, J. B., et al. (2012), ‘COI barcoding as a molecular assay for the identification of phytoseiid mites’, Systematic and Applied Acarology, 17 (4), 397-406 .

Li, Ming, et al. (2012), ‘Establishment of DNA barcodes for the identification of the botanical sources of the Chinese ‘cooling’ beverage’, Food Control, 25 (2), 758-66 .

Li, X.W. , et al. (2012), ‘High-throughput pyrosequencing of the complete chloroplast genome of Magnolia officinalis and its application in species identification’, Acta Pharmaceutica Sinica, 47 (1), 124-30

Li, Y.F., et al. (2012), ‘DNA Barcoding and Molecular Phylogeny of Drosophila lini and Its Sibling Species’, International Journal of Evolutionary Biology.

Li, Ming, et al. (2012), ‘Identification of Baiying (Herba Solani Lyrati) commodity and its toxic substitute Xungufeng (Herba Aristolochiae Mollissimae) using DNA barcoding and chemical profiling techniques’, Food Chemistry, 135 (3), 1653-58 .

Lijtmaer, Darío A., et al. (2012), ‘DNA Barcoding Birds: From Field Collection to Data Analysis’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 127-52 .

Lindeque, P., Boyer, S., and Bonnet, D. (2012), ‘A molecular method for the identification of resting eggs of acartiid copepods in the Thau lagoon, France’, Marine Biology, 1-6 .

Links, Matthew G., et al. (2012), ‘The Chaperonin-60 Universal Target Is a Barcode for Bacteria That Enables De Novo Assembly of Metagenomic Sequence Data’, PLoS ONE, 7 (11), e49755.

Liu, D. and Ma, J. (2012), ‘The Information Systems for DNA Barcode Data’, in N.-S. Yang (ed.), Systems and Computational Biology – Bioinformatics and Computational Modeling (Shanghai: Intech) .

Liu, Jie, et al. (2012), ‘Sampling Strategy and Potential Utility of Indels for DNA Barcoding of Closely Related Plant Species: A Case Study in Taxus’, International Journal of Molecular Sciences, 13 (7), 8740-51 .

Liu, Zhihua, et al. (2012), ‘Applying DNA barcodes for identification of plant species in the family Araliaceae’, Gene, 499 (1), 76-80.

Liu, D., et al. (2012), ‘BOLDMirror: a global mirror system of DNA barcode data’, Molecular Ecology Resources.

Liu, Shaoying, et al. (2012), ‘Phylogeny of Oriental Voles (Rodentia: Muridae: Arvicolinae): Molecular and Morphological Evidence’, Zoological Science, 29 (9), 610-22 .

Liu, Zhihua, et al. (2012), ‘Identification of medicinal vines by ITS2 using complementary discrimination methods’, Journal of Ethnopharmacology, 141 (1), 242-49 .

Liu, Chang, et al. (2012), ‘DNA Barcode Goes Two-Dimensions: DNA QR Code Web Server’, PLoS ONE, 7 (5), e35146 .

Lodge, David M., et al. (2012), ‘Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA’, Molecular Ecology, 21 (11), 2555-58.

López-Alvarez, Diana, et al. (2012), ‘A DNA Barcoding Method to Discriminate between the Model Plant Brachypodium distachyon and Its Close Relatives B. stacei and B. hybridum (Poaceae)’, PLoS ONE, 7 (12), e51058 .

López-Estrada, Estefany Karen, et al. (2012), ‘Seven new species of Notiospathius (Hymenoptera, Braconidae, Doryctinae) from Northwest Venezuela’, Journal of Hymenoptera Research, 29 (0), 37-61 .

Lopez-Vaamonde, C., et al. (2012), ‘Analysis of tissue dependent DNA yield for optimal sampling of micro-moths in large-scale biodiversity surveys’, European Journal of Entomology, 109 (1), 1-6 .

Lörz, A.N., et al. (2012), ‘High genetic diversity within Epimeria georgiana (Amphipoda) from the southern Scotia Arc’, Marine Biodiversity, 42 (2), 137-59 .

Lörz, A.-N., et al. (2012), ‘First molecular evidence for underestimated biodiversity of Rhachotropis (Crustacea, Amphipoda), with description of a new species.’, PLoS ONE, 7 (3), e32365 .

Lou, Melanie and Golding, G. Brian (2012), ‘The effect of sampling from subdivided populations on species identification with DNA barcodes using a Bayesian statistical approach’, Molecular Phylogenetics and Evolution, 65 (2), 765-73 .

Low, Candace, et al. (2012), ‘The relationship between variable host grouping and functional responses among parasitoids of Antispila nysaefoliella (Lepidoptera: Heliozelidae)’, Molecular Ecology, 21 (23), 5892-904 .

Lu, Liang, et al. (2012), ‘Small Mammal Investigation in Spotted Fever Focus with DNA-Barcoding and Taxonomic Implications on Rodents Species from Hainan of China’, PLoS ONE, 7 (8), e43479 .

Lucas, C., Thangaradjou, T., and Papenbrock, J. (2012), ‘Development of a DNA barcoding system for seagrasses: successful but not simple’, PLoS One, 7 (1), e29987.

Luddington, Ian A., Kaczmarska, Irena, and Lovejoy, Connie (2012), ‘Distance and Character-Based Evaluation of the V4 Region of the 18S rRNA Gene for the Identification of Diatoms (Bacillariophyceae)’, PLoS ONE, 7 (9), e45664 .

Luo, K., et al. (2012), ‘[Identification of gentianae macrophyllae radix using the ITS2 barcodes]’, Yao Xue Xue Bao, 47 (12), 1710-7.



Ma, Hongyu, Ma, Chunyan, and Ma, Lingbo (2012), ‘Molecular identification of genus Scylla (Decapoda: Portunidae) based on DNA barcoding and polymerase chain reaction’, Biochemical Systematics and Ecology, 41 (0), 41-47.

Ma, Ming-yi, et al. (2012), ‘A Study of DNA Barcoding on 32 Species of Bird in China’, Sichuan Journal of Zoology, 31 (5), 729-33.

Mabragana, E., et al. (2012), ‘Sardinella aurita (Clupeidae) in Mar Chiquita coastal lagoon: morphological and DNA barcoding identification approaches’, Cybium, 36 (2), 397-98.

Machida, Ryuji J. and Knowlton, Nancy (2012), ‘Ways to Mix Multiple PCR Amplicons into Single 454 Run for DNA Barcoding’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 355-61.

Madesis, Panagiotis, et al. (2012), ‘The application of Bar-HRM (Barcode DNA-High Resolution Melting) analysis for authenticity testing and quantitative detection of bean crops (Leguminosae) without prior DNA purification’, Food Control, 25 (2), 576-82.

Madesis, P., et al. (2012), ‘Barcoding the major Mediterranean leguminous crops by combining universal chloroplast and nuclear DNA sequence targets’, Genet Mol Res, 11 (AOP).

Maeda, Taro, et al. (2012), ‘Algivore or Phototroph? Plakobranchus ocellatus (Gastropoda) Continuously Acquires Kleptoplasts and Nutrition from Multiple Algal Species in Nature’, PLoS ONE, 7 (7), e42024.

Magnacca, Karl N. and Brown, Mark J. F. (2012), ‘DNA barcoding a regional fauna: Irish solitary bees’, Molecular Ecology Resources, 12 (6), 990-98.

Maia, V. H., et al. (2012), ‘DNA barcoding bromeliaceae: achievements and pitfalls’, PLoS One, 7 (1), e29877.

Makarova, Olga, et al. (2012), ‘DNA Barcoding for Identification of ‘Candidatus Phytoplasmas’ Using a Fragment of the Elongation Factor Tu Gene’, PLoS ONE, 7 (12), e52092.

Makol, J., et al. (2012), ‘Redescription of Leptus kattikus Haitlinger, 2009 (Actinotrichida, Parasitengona, Erythraeidae) and molecular identification of its host from DNA barcoding’, Zootaxa, 3569, 67-78.

Mamoozadeh, Nadya, R. and Freshwater, D. Wilson (2012), ‘Polysiphonia sensu lato (Ceramiales, Florideophyceae) species of Caribbean Panama including Polysiphonia lobophoralis sp. nov. and Polysiphonia nuda sp. nov’, Botanica Marina, 55 (4), 317.

Mankga, L. T., et al. (2012), ‘DNA barcoding medicinal plants of South Africa’, South African Journal of Botany, 79, 197-97.

Marouani, S., et al. (2012), ‘Taxonomic research on Squalus megalops (Macleay, 1881) and Squalus blainvillei (Risso, 1827) (Chondrichthyes: Squalidae) in Tunisian waters (central Mediterranean Sea)’, Scientia Marina, 76 (1).

Martínez, Juan José, et al. (2012), ‘DNA barcoding and morphological identification of Argentine species of Apanteles (Hymenoptera : Braconidae), parasitoids of cactus-feeding moths (Lepidoptera : Pyralidae : Phycitinae), with description of a new species’, Invertebrate Systematics, 26 (6), 435-44.

Martinez-de la Puente, Josue, et al. (2012), ‘Genetic characterization and molecular identification of the bloodmeal sources of the potential bluetongue vector Culicoides obsoletus in the Canary Islands, Spain’, Parasites & Vectors, 5 (1), 147.

Martins, Rogelia, et al. (2012), ‘First record of Zenion hololepis (Zenionidae) in Portuguese continental waters: the northernmost occurrence in the eastern Atlantic’, Marine Biodiversity Records, 5, e30.

Mat Jaafar, Tun Nurul Aimi, et al. (2012), ‘DNA Barcoding Reveals Cryptic Diversity within Commercially Exploited Indo-Malay Carangidae (Teleosteii: Perciformes)’, PLoS ONE, 7 (11), e49623.

Maya-Soriano, M. J., Holt, W. V., and Lloyd, R. E. (2012), ‘Biobanked Amphibian Samples Confirmed To Species Level Using 16S rRNA DNA Barcodes’, Biopreservation and Biobanking, 10 (1), 22-28.

McCusker, M. R., et al. (2012), ‘Barcoding Atlantic Canada’s commonly encountered marine fishes’, Molecular Ecology Resources, early online.

Meiklejohn, Kelly A., et al. (2012), ‘Comprehensive evaluation of DNA barcoding for the molecular species identification of forensically important Australian Sarcophagidae (Diptera)’, Invertebrate Systematics, 26 (6), 515-25.

Mejía, Omar, León-Romero, Yatzil, and Soto-Galera, Eduardo (2012), ‘DNA barcoding of the ichthyofauna of Pánuco-Tamesí complex: Evidence for taxonomic conflicts in some groups’, Mitochondrial DNA, 23 (6), 471-76.

Milstein, Daniela and Saunders, Gary W. (2012), ‘DNA barcoding of Canadian Ahnfeltiales (Rhodophyta) reveals a new species ‘Ahnfeltia borealis sp. nov’, Phycologia, 51 (3), 247-59.

Milstein, Daniela, et al. (2012), ‘Will a DNA barcoding approach be useful to identify Porphyra species (Bangiales, Rhodophyta)?’, Journal of Applied Phycology, 24 (4), 837-45.

Mineur, Frédéric, et al. (2012), ‘Four new exotic red seaweeds on European shores’, Biological Invasions, 14 (8), 1635-41.

Mirnezhad, Mohammad, et al. (2012), ‘Variation in Genetics and Performance of Dutch Western Flower Thrips Populations’, Journal of Economic Entomology, 105 (5), 1816-24.

Mironov, S. V., Dabert, J., and Dabert, M. (2012), ‘A new feather mite species of the genus Proctophyllodes Robin, 1877 (Astigmata: Proctophyllodidae) from the Long- tailed Tit Aegithalos caudatus (Passeriformes: Aegithalidae)-morphological description with DNA barcode data’, Zootaxa, (3253), 54-61.

Mobberley, Jennifer M., Ortega, Maya C., and Foster, Jamie S. (2012), ‘Comparative microbial diversity analyses of modern marine thrombolitic mats by barcoded pyrosequencing’, Environmental Microbiology, 14 (1), 82-100.

Morgan, Jess, et al. (2012), ‘Detection of interspecies hybridisation in Chondrichthyes: hybrids and hybrid offspring between Australian (Carcharhinus tilstoni) and common (C. limbatus) blacktip shark found in an Australian fishery’, Conservation Genetics, 13 (2), 455-63.

Morise, Hisashi, et al. (2012), ‘Profiling Nematode Communities in Unmanaged Flowerbed and Agricultural Field Soils in Japan by DNA Barcode Sequencing’, PLoS ONE, 7 (12), e51785.

Morrow, C. C., et al. (2012), ‘Congruence between nuclear and mitochondrial genes in Demospongiae: A new hypothesis for relationships within the G4 clade (Porifera: Demospongiae)’, Molecular Phylogenetics and Evolution, 62 (1), 174-90.

Moura, Carlos J., et al. (2012), ‘A molecular phylogenetic appraisal of the systematics of the Aglaopheniidae (Cnidaria: Hydrozoa, Leptothecata) from the north-east Atlantic and west Mediterranean’, Zoological Journal of the Linnean Society, 164 (4), 717-27.

Moyer, Gregory and Díaz-Ferguson, Edgardo (2012), ‘Identification of endangered Alabama lampmussel (Lampsilis virescens) specimens collected in the Emory river, Tennessee, USA via DNA barcoding’, Conservation Genetics, 13 (3), 885-89.

Murphy, Robert W., et al. (2012), ‘Cold Code: the global initiative to DNA barcode amphibians and nonavian reptiles’, Molecular Ecology Resources, early online.

Mutanen, M., et al. (2012), ‘Epinotia cinereana (Haworth, 1811) bona sp., a Holarctic tortricid distinct from E. nisella (Clerck, 1759) ( Lepidoptera: Tortricidae: Eucosmini) as evidenced by DNA barcodes, morphology and life history’, Zootaxa, (3318), 1-25.

Mutanen, M., et al. (2012), ‘DNA barcodes reveal that the widespread European tortricid moth Phalonidia manniana (Lepidoptera: Tortricidae) is a mixture of two species’, Zootaxa, (3262), 1-21.

Mutanen, Marko, et al. (2012), ‘Allopatry as a Gordian Knot for Taxonomists: Patterns of DNA Barcode Divergence in Arctic-Alpine Lepidoptera’, PLoS ONE, 7 (10), e47214.



Naaum, A. M., et al. (2012), ‘Differentiation between Aphis pomi and Aphis spiraecola using multiplex real-time PCR based on DNA barcode sequences’, Journal of Applied Entomology, 136 (9), 704-10.

Naciri, Yamama, Caetano, Sofia, and Salamin, Nicolas (2012), ‘Plant DNA barcodes and the influence of gene flow’, Molecular Ecology Resources, 12 (4), 575-80.

Nagoshi, Rodney N., et al. (2012), ‘Assessing the Usefulness of DNA Barcoding to Identify Oxycarenus hyalinipennis (Hemiptera: Oxycarenidae) in Florida, a Potentially Invasive Pest of Cotton’, Florida Entomologist, 95 (4), 1174-81.

Nagpure, N.S., et al. (2012), ‘FBIS: A regional DNA barcode archival & analysis system for Indian fishes’, Bioinformation, 8 (10), 483-88.

Nagy, Zoltán T., et al. (2012), ‘First Large-Scale DNA Barcoding Assessment of Reptiles in the Biodiversity Hotspot of Madagascar, Based on Newly Designed COI Primers’, PLoS ONE, 7 (3), e34506.

Nam, Young-Do, Park, So-lim, and Lim, Seong-Il (2012), ‘Microbial Composition of the Korean Traditional Food ‘kochujang’ Analyzed by a Massive Sequencing Technique’, Journal of Food Science, 77 (4), M250-M56.

Nazarov, R., et al. (2012), ‘Two new cryptic species of the Cyrtodactylus irregularis complex (Squamata: Gekkonidae) from southern Vietnam’, Zootaxa, (3302), 1-24.

Negri, Mariana, Pileggi, Leonardo G., and Mantelatto, Fernando L. (2012), ‘Molecular barcode and morphological analyses reveal the taxonomic and biogeographical status of the striped-legged hermit crab species Clibanarius sclopetarius (Herbst, 1796) and Clibanarius vittatus (Bosc, 1802) (Decapoda : Diogenidae)’, Invertebrate Systematics, 26 (6), 561-71.

Nel, Jacques and Huemer, Peter (2012), ‘Epinotia cinereana (Haworth, 1811), a new species for France, Italy and Austria (Lep. Tortricidae: Eucosmini).’, Oreina, 19, 20-21.

Nelson, Leigh A., et al. (2012), ‘Beyond barcoding: A mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (Diptera: Calliphoridae)’, Gene, 511 (2), 131-42.

Ni, Lehai, et al. (2012), ‘DNA barcoding and phylogeny in the family Mactridae (Bivalvia: Heterodonta): Evidence for cryptic species’, Biochemical Systematics and Ecology, 44 (0), 164-72.

Nicholls, James A., et al. (2012), ‘Mitochondrial barcodes are diagnostic of shared refugia but not species in hybridizing oak gallwasps’, Molecular Ecology, 21 (16), 4051-62.

Nichols, Ruth V., et al. (2012), ‘Browsed twig environmental DNA: diagnostic PCR to identify ungulate species’, Molecular Ecology Resources, 12 (6), 983-89.

Nicolas, Violaine, et al. (2012), ‘Assessment of Three Mitochondrial Genes (16S, Cytb, CO1) for Identifying Species in the Praomyini Tribe (Rodentia: Muridae)’, PLoS ONE, 7 (5), e36586.

Nicole, S., et al. (2012), ‘DNA Barcoding as a Reliable Method for the Authentication of Commercial Seafood Products’, Food Technology and Biotechnology, 50 (4), 387-98.

Nishiumi, Isao (2012), ‘DNA barcoding and species classification of Japanese birds’, Japanese Journal of Ornithology, 61 (2), 223-37.

Nunes, Juliano, et al. (2012), ‘Doryctopambolus Nunes & Zaldívar-Riverón (Braconidae), a new neotropical doryctine wasp genus with propodeal spines’, ZooKeys, 223 (0), 53-67.

Nzeduru, Chinyere V., Ronca, Sandra, and Wilkinson, Mike J. (2012), ‘DNA Barcoding Simplifies Environmental Risk Assessment of Genetically Modified Crops in Biodiverse Regions’, PLoS ONE, 7 (5), e35929.



O’Hara, Timothy, et al. (2012), ‘Biogeographical and phylogeographical relationships of the bathyal ophiuroid fauna of the Macquarie Ridge, Southern Ocean’, Polar Biology, 1-13.

O’Dor, R., et al. (2012), ‘A Census of Fishes and Everything they Eat: How the Census of Marine Life Advanced Fisheries Science’, Fisheries, 37 (9), 398-409.

Oever, Jon Peter and Gofferjé, Marc (2012), ‘‘From Pilot to production’: Large Scale Digitisation project at Naturalis Biodiversity Center’, ZooKeys, 209 (0), 87-92.

Osmundson, Todd W., et al. (2012), ‘Back to basics: an evaluation of NaOH and alternative rapid DNA extraction protocols for DNA barcoding, genotyping, and disease diagnostics from fungal and oomycete samples’, Molecular Ecology Resources, 13 (1), 66-74.

Pang, X., Luo, H., and Sun, C. (2012), ‘Assessing the potential of candidate DNA barcodes for identifying non-flowering seed plants’, Plant Biology.

Pang, X., Song, J., and Chen, S. (2012), ‘[Identification of Junci Medulla using DNA barcoding technique]’, Zhongguo Zhong Yao Za Zhi, 37 (8), 1097-9.

Pang, X., et al. (2012), ‘Use of the potential DNA barcode ITS2 to identify herbal materials’, Journal of Natural Medicines.

Pang, Xiaohui, et al. (2012), ‘Utility of the trnH/psbA Intergenic Spacer Region and Its Combinations as Plant DNA Barcodes: A Meta-Analysis’, PLoS ONE, 7 (11), e48833.

Parker, Meaghan, et al. (2012), ‘Laboratory Information Management Systems for DNA Barcoding’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 269-310.

Parveen, I., et al. (2012), ‘DNA barcoding of endangered Indian Paphiopedilum species’, Molecular Ecology Resources, 12 (1), 82-90.

Paukstadt, Ulrich and Paukstadt, Laela Hayati (2012), ‘Samia beekei sp. nov., a new wild silkmoth from northern Vietnam (Lepidoptera: Saturniidae)’, Beitraege zur Kenntnis der Wilden Seidenspinner, 10 (8), 295-306.

Pawlowski, Jan, et al. (2012), ‘CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms’, PLoS Biol, 10 (11), e1001419.

Pawluczyk, Marta, et al. (2012), ‘Two alleles of rpoB and rpoC1 distinguish an endemic European population from Cistus heterophyllus and its putative hybrid (C. × clausonis) with C. albidus’, Plant Systematics and Evolution, 298 (2), 409-19.

Paz, Andrea and Crawford, Andrew (2012), ‘Molecular-based rapid inventories of sympatric diversity: A comparison of DNA barcode clustering methods applied to geography-based vs clade-based sampling of amphibians’, Journal of Biosciences, 37 (5), 887-96.

Pazian, M. F., et al. (2012), ‘Cytogenetic and molecular markers reveal the complexity of the genus Piabina Reinhardt, 1867 (Characiformes: Characidae)’, Neotropical Ichthyology, 10 (2), 329-40.

Pelletier, Y., et al. (2012), ‘A New Approach for the Identification of Aphid Vectors (Hemiptera: Aphididae) of Potato Virus Y’, Journal of Economic Entomology, 105 (6), 1909-14.

Pérez-Losada, Marcos, et al. (2012), ‘Taxonomic assessment of Lumbricidae (Oligochaeta) earthworm genera using DNA barcodes’, European Journal of Soil Biology, 48 (0), 41-47.

Pesic, V., Valdecasas, A. G., and Garcia-Jimenez, R. (2012), ‘Simultaneous evidence for a new species of Torrenticola Piersig, 1896 (Acari, Hydrachnidia) from Montenegro’, Zootaxa, 3515, 38-50.

Peterson, Stephen (2012), ‘Aspergillus and Penicillium identification using DNA sequences: barcode or MLST?’, Applied Microbiology and Biotechnology, 95 (2), 339-44.

Pierre, Jacques and Bernaud, Dominique (2012), ‘Revision of the Acraea (Acraea) of ‘epaea’ group (Lepidoptera, Nymphalidae)’, Bulletin de la Societe Entomologique de France, 117 (1), 7-36.

Pilipenko, Valentin, Salmela, Jukka, and Vesterinen, Eero (2012), ‘Description and DNA barcoding of Tipula (Pterelachisus) recondita sp. n. from the Palaearctic region (Diptera, Tipulidae)’, ZooKeys, 192 (0), 51-65.

Pilloni, Giovanni, et al. (2012), ‘Testing the Limits of 454 Pyrotag Sequencing: Reproducibility, Quantitative Assessment and Comparison to T-RFLP Fingerprinting of Aquifer Microbes’, PLoS ONE, 7 (7), e40467.

Pina, Tatiana, et al. (2012), ‘The use of integrative taxonomy in determining species limits in the convergent pupa coloration pattern of Aphytis species’, Biological Control, 61 (1), 64-70.

Piry, S., et al. (2012), ‘|SE|S|AM|E| Barcode: NGS-oriented software for amplicon characterization – application to species and environmental barcoding’, Molecular Ecology Resources, 12 (6), 1151-57.

Pontin, D. and Cruickshank, R. (2012), ‘Molecular phylogenetics of the genus Physalia (Cnidaria: Siphonophora) in New Zealand coastal waters reveals cryptic diversity’, Hydrobiologia, 686 (1), 91-105.

Porco, David, et al. (2012), ‘Cryptic Diversity in the Ubiquist Species Parisotoma notabilis (Collembola, Isotomidae): A Long-Used Chimeric Species?’, PLoS ONE, 7 (9), e46056.

Porco, D., et al. (2012), ‘Challenging species delimitation in Collembola: cryptic diversity among common springtails unveiled by DNA barcoding’, Invertebrate Systematics, 26 (6), 470-77.

Poyarkov, N. A., et al. (2012), ‘Review of the systematics, morphology and distribution of Asian Clawed Salamanders, genus Onychodactylus (Amphibia, Caudata: Hynobiidae), with the description of four new species’, Zootaxa, (3465), 1-106.

Pramual, Pairot and Kuvangkadilok, Chaliow (2012), ‘Integrated cytogenetic, ecological, and DNA barcode study reveals cryptic diversity in Simulium (Gomphostilbia) angulistylum (Diptera: Simuliidae)’, Genome, 55 (6), 447-58.

Puckridge, Melody, et al. (2012), ‘Cryptic diversity in flathead fishes (Scorpaeniformes: Platycephalidae) across the Indo-West Pacific uncovered by DNA barcoding’, Molecular Ecology Resources, 13 (1), 32-42.

Puillandre, N., et al. (2012), ‘ABGD, Automatic Barcode Gap Discovery for primary species delimitation’, Molecular Ecology, 21 (8), 1864-77.

Puillandre, N., et al. (2012), ‘Large-scale species delimitation method for hyperdiverse groups’, Molecular Ecology, 21 (11), 2671-91.

Puillandre, N., et al. (2012), ‘New taxonomy and old collections: integrating DNA barcoding into the collection curation process’, Molecular Ecology Resources, 12 (3), 396-402.

Puslednik, Louise, et al. (2012), ‘Protein–protein interactions of the cytochrome c oxidase DNA barcoding region’, Systematic Entomology, 37 (1), 229-36.

Quaedvlieg, W., et al. (2012), ‘DNA barcoding of Mycosphaerella species of quarantine importance to Europe’, Persoonia, 29, 101-15.

Quicke, Donald L. J., et al. (2012), ‘A new genus and three new species of parasitoid wasp from Papua New Guinea and redescription of Trigonophatnus Cameron (Hymenoptera, Braconidae, Rogadinae)’, Journal of Natural History, 46 (21-22), 1369-85.

Quicke, Donald, et al. (2012), ‘Colastomion Baker (Braconidae, Rogadinae): nine new species from Papua New Guinea reared from Crambidae’, Journal of Hymenoptera Research, 28 (0), 85-121.

Quicke, Donald L. J., et al. (2012), ‘Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence’, Molecular Ecology Resources, 12 (4), 676-85.



Rai, P. S., et al. (2012), ‘DNA barcoding of authentic and substitute samples of herb of the family Asparagaceae and Asclepiadaceae based on the ITS2 region’, J Ayurveda Integr Med, 3 (3), 136-40.

Raja, H., et al. (2012), ‘DNA barcoding for fungal taxonomy: A primer for the natural products community’, Planta Med, 78 (11), PI69.

Rajaei, S. H., Stuning, D., and Trusch, R. (2012), ‘Taxonomic revision and zoogeographical patterns of the species of Gnopharmia Staudinger, 1892 (Geometridae, Ennominae)’, Zootaxa, (3360), 1-52.

Rajapakse, S., et al. (2012), ‘Evaluation of species limits of Hortonia by DNA barcoding’, Journal of the National Science Foundation of Sri Lanka, 40 (4), 345-49.

Rakauskas, Rimantas and Bašilova, Jekaterina (2012), ‘Barcoding of aphids (Hemiptera, Aphididae and Adelgidae): proper usage of the global data set’, Molecular Ecology Resources, 13 (1), 6-9.

Ranasinghe, J. Ananda, et al. (2012), ‘Performance of Two Southern California Benthic Community Condition Indices Using Species Abundance and Presence-Only Data: Relevance to DNA Barcoding’, PLoS ONE, 7 (8), e40875.

Randrianambinintsoa, F. J., et al. (2012), ‘First record of phlebotomine sandflies (Diptera: Psychodidae) in the Comoros Archipelago with descriptions of Sergentomyia (Vattieromyia) pessoni n.sp. and S. (Rondanomyia) goodmani comorensis n. ssp.’, Parasite-Journal De La Societe Francaise De Parasitologie, 19 (3), 195-206.

Randrianiaina, Roger Daniel, et al. (2012), ‘Diversity of the strongly rheophilous tadpoles of Malagasy tree frogs, genus Boophis (Anura, Mantellidae), and identification of new candidate species via larval DNA sequence and morphology’, ZooKeys, 178 (0), 59-124.

Rebijith, K. B., et al. (2012), ‘DNA Barcoding and Development of Species-Specific Markers for the Identification of Tea Mosquito Bugs (Miridae: Heteroptera) in India’, Environmental Entomology, 41 (5), 1239-45.

Reid, Noah and Carstens, Bryan (2012), ‘Phylogenetic estimation error can decrease the accuracy of species delimitation: a Bayesian implementation of the general mixed Yule-coalescent model’, BMC Evolutionary Biology, 12 (1), 196.

Renaud, Anais, Savage, Jade, and Adamowicz, Sarah (2012), ‘DNA barcoding of Northern Nearctic Muscidae (Diptera) reveals high correspondence between morphological and molecular species limits’, BMC Ecology, 12 (1), 24.

Riehl, Torben and Kaiser, Stefanie (2012), ‘Conquered from the Deep Sea? A New Deep-Sea Isopod Species from the Antarctic Shelf Shows Pattern of Recent Colonization’, PLoS ONE, 7 (11), e49354.

Riutort, M., et al. (2012), ‘Evolutionary history of the Tricladida and the Platyhelminthes: an up-to-date phylogenetic and systematic account’, The International Journal of Developmental Biology, 56, 5-17.

Rivera, K. G., et al. (2012), ‘Penicillium mallochii and P. guanacastense, two new species isolated from Costa Rican caterpillars’, Mycotaxon, 119, 315-28.

Robe, Lizandra J., Machado, Stela, and Bartholomei-Santos, Marlise L. (2012), ‘The DNA Barcoding and the Caveats with Respect to Its Application to Some Species of Palaemonidae (Crustacea, Decapoda)’, Zoological Science, 29 (10), 714-24.

Roberts, Rodney, Bischoff, Joseph, and Reymond, Stephen (2012), ‘Differential gene expression in Alternaria gaisen exposed to dark and light’, Mycological Progress, 11 (2), 373-82.

Rönkä, Nelli, et al. (2012), ‘Phylogeography of the Temminck’s Stint (Calidris temminckii): historical vicariance but little present genetic structure in a regionally endangered Palearctic wader’, Diversity and Distributions, 18 (7), 704-16.

Roopa, H. K., et al. (2012), ‘Phylogenetic Analysis of Trialeurodes Spp. (Hemiptera: Aleyrodidae) from India Based on Differences in Mitochondrial and Nuclear Dna’, Florida Entomologist, 95 (4), 1086-94.

Rosa, Gonçalo, et al. (2012), ‘The amphibians of the relict Betampona low-elevation rainforest, eastern Madagascar: an application of the integrative taxonomy approach to biodiversity assessments’, Biodiversity and Conservation, 21 (6), 1531-59.

Rosso, J. J., et al. (2012), ‘DNA barcoding Neotropical fishes: recent advances from the Pampa Plain, Argentina’, Molecular Ecology Resources, 12 (6), 999-1011.

Roth, Steffen (2012), ‘Pouring new wine into old bottles: DNA studies on collection material.’, Heteropteron, 36, 5-8.

Rougerie, Rodolphe (2012), ‘Les codes-barres ADN des lepidopteres. Partie 2 : protocoles experimentaux’, Oreina, 18, 14-16.

Rougerie, Rodolphe, Naumann, Stefan, and Nässig, Wolfgang A. (2012), ‘Morphology and Molecules Reveal Unexpected Cryptic Diversity in the Enigmatic Genus Sinobirma Bryk, 1944 (Lepidoptera: Saturniidae)’, PLoS ONE, 7 (9), e43920.

Rougerie, R., et al. (2012), ‘DNA barcodes and morphology reveal a hybrid hawkmoth in Tahiti (Lepidoptera : Sphingidae)’, Invertebrate Systematics, 26 (6), 445-50.

Rousseau, P., et al. (2012), ‘DNA barcoding of Africa’s endemic cycads: Encephalartos Lehm. and Stangeria T. Moore’, South African Journal of Botany, 79, 209-09.

Ruiz-Lopez, Freddy, et al. (2012), ‘DNA barcoding reveals both known and novel taxa in the Albitarsis Group (Anopheles: Nyssorhynchus) of Neotropical malaria vectors’, Parasites & Vectors, 5 (1), 44.

Ruocco, N. L., et al. (2012), ‘Morphology and DNA Barcoding Reveal a New Species of Eagle Ray from the Southwestern Atlantic: Myliobatis ridens sp. nov. (Chondrichthyes: Myliobatiformes: Myliobatidae)’, Zoological Studies, 51 (6), 862-73.

Rützler, Klaus (2012), ‘The Role of Sponges in the Mesoamerican Barrier-Reef Ecosystem, Belize’, in Maria J. Uriz Manuel Maldonado Mikel A. Becerro and Turon Xavier (eds.), Advances in Marine Biology (Volume 61: Academic Press), 211-71.



Sachithanandam, V., et al. (2012), ‘DNA barcoding, phylogenetic study of Epinephelus spp. from Andaman coastal region, India’, Indian Journal of Geo-Marine Sciences, 41 (3), 203-11.

Salokannel, J., et al. (2012), ‘A taxonomic study of the caddisfly Oxyethira falcata Morton, 1893 (Trichoptera: Hydroptilidae) using genital morphology and DNA barcoding’, Entomologica Fennica, 23 (4), 199-205.

Salvi, Daniele and Mariottini, Paolo (2012), ‘Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia’, Molecular Phylogenetics and Evolution, 65 (2), 792-98.

Sandionigi, A., et al. (2012), ‘Analytical approaches for DNA barcoding data – how to find a way for plants?’, Plant Biosystems – An International Journal Dealing with all Aspects of Plant Biology, 146 (4), 805-13.

Särkinen, Tiina, et al. (2012), ‘How to Open the Treasure Chest? Optimising DNA Extraction from Herbarium Specimens’, PLoS ONE, 7 (8), e43808.

Saunders, Gary W. and McDevit, Daniel C. (2012), ‘Methods for DNA Barcoding Photosynthetic Protists Emphasizing the Macroalgae and Diatoms’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 207-22.

Scheffers, Brett R., et al. (2012), ‘What we know and don’t know about Earth’s missing biodiversity’, Trends in Ecology & Evolution, 27 (9), 501-10.

Schizas, N. V. (2012), ‘Misconceptions regarding nuclear mitochondrial pseudogenes (Numts) may obscure detection of mitochondrial evolutionary novelties’, Aquatic Biology, 17 (1), 91-96.

Schoch, Conrad L., et al. (2012), ‘Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi’, Proceedings of the National Academy of Sciences, 109 (16), 6241-46.

Schroeder, H., Hoeltken, A. M., and Fladung, M. (2012), ‘Differentiation of Populus species using chloroplast single nucleotide polymorphism (SNP) markers – essential for comprehensible and reliable poplar breeding’, Plant Biology, 14 (2), 374-81.

Schulte, U., et al. (2012), ‘Cryptic niche conservatism among evolutionary lineages of an invasive lizard’, Global Ecology and Biogeography, 21 (2), 198-211.

Schulze, Arne and Jansen, Martin (2012), ‘One species, two strategies? Oviposition site variation in a member of the Leptodactylus pentadactylus group (Amphibia: Anura: Leptodactylidae)’, Studies on Neotropical Fauna and Environment, 47 (3), 183-91.

Seena, Sahadevan, et al. (2012), ‘Intraspecific Variation of the Aquatic Fungus Articulospora tetracladia: An Ubiquitous Perspective’, PLoS ONE, 7 (4), e35884.

Selvaraj, Dhivya, et al. (2012), ‘DNA Barcode ITS Effectively Distinguishes the Medicinal Plant Boerhavia diffusa from Its Adulterants’, Genomics, Proteomics & Bioinformatics, 10 (6), 364-67.

Sharma, A., et al. (2012), ‘DNA barcoding of the Mexican sedative and anxiolytic plant Galphimia glauca’, J Ethnopharmacol, 144 (2), 371-78.

Shehzad, Wasim, et al. (2012), ‘Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan’, Molecular Ecology, 21 (8), 1951-65.

Sherwood, A. R., et al. (2012), ‘A comparison of UPA and 16S: Performance evaluation for phylogenetic reconstruction and DNA Barcoding of cyanobacteria’, Journal of Phycology, 48, S12-S12.

Shokralla, Shadi, et al. (2012), ‘Next-generation sequencing technologies for environmental DNA research’, Molecular Ecology, 21 (8), 1794-805.

Shrubovych, J., Schneider, C., and D’Haese, C. A. (2012), ‘Description of a new species of Acerentulus Berlese 1908 (Protura: Acerentomata: Acerentomidae) with its barcode sequence and a key to the confinis group’, Annales De La Societe Entomologique De France, 48 (1-2), 1-7.

Siddall, Mark E, et al. (2012), ‘DNA barcoding of parasitic nematodes: Is it kosher?’, Journal of Parasitology, 98 (3), 692-94.

Simon, Uwe K., et al. (2012), ‘Accession-Specific Haplotypes of the Internal Transcribed Spacer Region in Arabidopsis thaliana. A Means for Barcoding Populations’, Molecular Biology and Evolution, 29 (9), 2231-39.

Singh, Uma M., et al. (2012), ‘The loci recommended as universal barcodes for plants on the basis of floristic studies may not work with congeneric species as exemplified by DNA barcoding of Dendrobium species’, BMC Research Notes, 5 (1), 42.

Skale, Andre, et al. (2012), ‘High mitochondrial DNA sequence divergence in New Guinea Carabdytes stream beetles and the taxonomist’s dilemma when other evidence is kind of subtle (and collecting localities are far far away)’, ZooKeys, 247 (0), 31-43.

Slowik, J. and Blagoev, G. A. (2012), ‘First description of the male spider Pacifiphantes magnificus (Chamberlin & Ivie) (Araneae: Linyphiidae)’, Zootaxa, 3481, 73-81.

Slowick, J. and Blagoev, G. (2012), ‘A survey of spiders (Arachnida: Araneae) of Prince of Wales Island, Alaska; combining morphological and DNA barcode identification techniques.’, Insecta Mundi, 0251.

Smith, David, et al. (2012), ‘Hyperparasitoid wasps (Hymenoptera, Trigonalidae) reared from dry forest and rain forest caterpillars of Area de Conservación Guanacaste, Costa Rica’, Journal of Hymenoptera Research, 29 (0), 119-44.

Smith, K. F., et al. (2012), ‘Barcoding of the cytochrome oxidase I ( COI) indicates a recent introduction of Ciona savignyi into New Zealand and provides a rapid method for Ciona species discrimination’, Aquatic Invasions, 7 (3), 305-13.

Smith, P.J., et al. (2012), ‘DNA barcodes and species identifications in Ross Sea and Southern Ocean fishes’, Polar Biology, 35 (9), 1297-310.

Smith, Kristine M., et al. (2012), ‘Zoonotic Viruses Associated with Illegally Imported Wildlife Products’, PLoS ONE, 7 (1), e29505.

Smith, M.A., et al. (2012), ‘DNA barcoding and the taxonomy of Microgastrinae wasps (Hymenoptera, Braconidae): impacts after 8 years and nearly 20 000 sequences’, Molecular Ecology Resources.

Smith, M.A., et al. (2012), ‘Wolbachia and DNA Barcoding Insects: Patterns, Potential, and Problems’, PLoS ONE, 7 (5), e36514.

Socolovschi, Cristina, et al. (2012), ‘Rickettsia Species in African Anopheles Mosquitoes’, PLoS ONE, 7 (10), e48254.

Soehner, Sylvia, et al. (2012), ‘Who am I – and if so, how many? Species diversity of calcareous dinophytes (Thoracosphaeraceae, Peridiniales) in the Mediterranean Sea’, Organisms Diversity & Evolution, 12 (4), 339-48.

Solis, A. and Kohlmann, B. (2012), ‘Checklist and distribution atlas of the Scarabaeinae (Coleoptera: Scarabaeidae) of Costa Rica’, Zootaxa, (3482), 01-32.

Sonet, Gontran, et al. (2012), ‘Why is the molecular identification of the forensically important blowfly species Lucilia caesar and L. illustris (family Calliphoridae) so problematic?’, Forensic Science International, 223 (1–3), 153-59.

Song, Jing-Yuan, et al. (2012), Application of deoxyribonucleic acid barcoding in Lauraceae plants (8) 4-11.

Song, Jingyuan, et al. (2012), ‘Extensive Pyrosequencing Reveals Frequent Intra-Genomic Variations of Internal Transcribed Spacer Regions of Nuclear Ribosomal DNA’, PLoS ONE, 7 (8), e43971.

Sousa, L. C., et al. (2012), ‘Molecular characterization of an opossum Didelphis albiventris (Marsupialia: Didelphidae) population in an urban fragment of the Brazilian Atlantic rainforest and support to species barcode identification’, Genet Mol Res, 11 (3), 2487-96.

Sperling, Erik, et al. (2012), ‘The complete mitochondrial genome of the verongid sponge Aplysina cauliformis: implications for DNA barcoding in demosponges’, Hydrobiologia, 687 (1), 61-69.

Spinks, Phillip Q., et al. (2012), ‘Species boundaries and phylogenetic relationships in the critically endangered Asian box turtle genus Cuora’, Molecular Phylogenetics and Evolution, 63 (3), 656-67.

Spouge, JohnL and Mariño-Ramírez, Leonardo (2012), ‘The Practical Evaluation of DNA Barcode Efficacy’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 365-77.

Srinivasan, R. and Jambulingam, P. (2012), ‘Morphological and Anatomical Variations among Phlebotomus (Phlebotomus) papatasi Sensu Lato (Diptera: Psychodidae)’, Journal of Medical Entomology, 49 (3), 441-44.

Sroka, Pavel (2012), ‘Systematics and phylogeny of the West Palaearctic representatives of subfamily Baetinae (Insecta: Ephemeroptera): combined analysis of mitochondrial DNA sequences and morphology’, Aquatic Insects, 34 (1), 23-53.

Sroka, P., Martynov, A. V., and Godunko, R. J. (2012), ‘Morphological and genetic variability of Baetis (Rhodobaetis) braaschi Zimmermann, 1980 (Ephemeroptera: Baetidae)’, Zootaxa, (3323), 27-49.

Stahlhut, Julie K., et al. (2012), ‘Wolbachia (Rickettsiales) infections and bee (Apoidea) barcoding: a response to Gerth et al’, Systematics and Biodiversity, 10 (4), 395-401.

Stampar, Sergio N., et al. (2012), ‘Evolutionary Diversification of Banded Tube-Dwelling Anemones (Cnidaria; Ceriantharia; Isarachnanthus) in the Atlantic Ocean’, PLoS ONE, 7 (7), e41091.

Standley, Claire J and Stothard, J Russell (2012), ‘DNA barcoding of schistosome cercariae reveals a novel sub-lineage within Schistosoma rodhaini from Ngamba Island Chimpanzee Sanctuary, Lake Victoria’, Journal of Parasitology, 98 (5), 1049-51.

Steele, P. Roxanne, et al. (2012), ‘Quality and quantity of data recovered from massively parallel sequencing: Examples in Asparagales and Poaceae’, American Journal of Botany, 99 (2), 330-48.

Steinke, D., et al. (2012), ‘Von kryptischen Arten und Lebensräumen – DNA-Barcoding trifft auf die subterrane Fauna Deutschlands. ‘, Mitteilungen des Verbandes der deutschen Höhlen- und Karstforscher 58 (2), 49-50.

Stern, Rowena F., et al. (2012), ‘Evaluating the Ribosomal Internal Transcribed Spacer (ITS) as a Candidate Dinoflagellate Barcode Marker’, PLoS ONE, 7 (8), e42780.

Stoeckle, Mark Y. and Kerr, Kevin C. R. (2012), ‘Frequency Matrix Approach Demonstrates High Sequence Quality in Avian BARCODEs and Highlights Cryptic Pseudogenes’, PLoS ONE, 7 (8), e43992.

Stoof-Leichsenring, Kathleen R., et al. (2012), ‘Hidden diversity in diatoms of Kenyan Lake Naivasha: a genetic approach detects temporal variation’, Molecular Ecology, 21 (8), 1918-30.

Stothard, J. R., et al. (2012), ‘Parasitological and malacological surveys reveal urogenital schistosomiasis on Mafia Island, Tanzania to be an imported infection’, Acta Trop.

Strugnell, J. M., et al. (2012), ‘Persistent genetic signatures of historic climatic events in an Antarctic octopus’, Molecular Ecology.

Strutzenberger, Patrick, Brehm, Gunnar, and Fiedler, Konrad (2012), ‘DNA Barcode Sequencing from Old Type Specimens as a Tool in Taxonomy: A Case Study in the Diverse Genus Eois (Lepidoptera: Geometridae)’, PLoS ONE, 7 (11), e49710.

Sucher, Nikolaus J., Hennell, James R., and Carles, Maria C. (2012), ‘DNA Fingerprinting, DNA Barcoding, and Next Generation Sequencing Technology in Plants’, in N.J. Sucher, J.R. Hennell, and M.C. Carles (eds.), Plant DNA Fingerprinting and Barcoding (Methods in Molecular Biology, 862), 13-22.

Sun, Zhiying and Chen, Shilin (2012), ‘Identification of cortex herbs using the DNA barcode nrITS2’, Journal of Natural Medicines, 1-7.

Sun, Y., Kupriyanova, E. K., and Qiu, J. W. (2012), ‘COI barcoding of Hydroides: a road from impossible to difficult’, Invertebrate Systematics, 26 (6), 539-47.

Sun, Y., et al. (2012), ‘DNA barcoding of Ceanogastropoda along coast of Chine based on the COI gene’, Molecular Ecology Resources, 12 (2), 209-18.

Sun, Xiao-Qin, et al. (2012), ‘DNA Barcoding the Dioscorea in China, a Vital Group in the Evolution of Monocotyledon: Use of matK Gene for Species Discrimination’, PLoS ONE, 7 (2), e32057.

Swenson, Nathan G (2012), ‘Phylogenetic Analyses of Ecological Communities Using DNA Barcode Data’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 409-19.



Taberlet, Pierre, et al. (2012), ‘Environmental DNA’, Molecular Ecology, 21 (8), 1789-93.

Taberlet, Pierre, et al. (2012), ‘Towards next-generation biodiversity assessment using DNA metabarcoding’, Molecular Ecology, 21 (8), 2045-50.

Taberlet, Pierre, et al. (2012), ‘Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies’, Molecular Ecology, 21 (8), 1816-20.

Tan, Ji, et al. (2012), ‘Assessment of Four Molecular Markers as Potential DNA Barcodes for Red Algae Kappaphycus Doty and Eucheuma J. Agardh (Solieriaceae, Rhodophyta)’, PLoS ONE, 7 (12), e52905.

Tänzler, Rene, et al. (2012), ‘DNA Barcoding for Community Ecology – How to Tackle a Hyperdiverse, Mostly Undescribed Melanesian Fauna’, PLoS ONE, 7 (1), e28832.

Tay, Wee Tek, et al. (2012), ‘Will the Real Bemisia tabaci Please Stand Up?’, PLoS ONE, 7 (11), e50550.

Taylor, H. R. and Harris, W. E. (2012), ‘An emergent science on the brink of irrelevance: a review of the past 8 years of DNA barcoding’, Molecular Ecology Resources, 12 (3), 377-88.

Terossi, Mariana and Mantelatto, Fernando L. (2012), ‘Morphological and genetic variability in Hippolyte obliquimanus Dana, 1852 (Decapoda, Caridea, Hippolytidae) from Brazil and the Caribbean Sea’, Crustaceana, 85 (6), 685-712.

Theodoridis, Spyros, et al. (2012), ‘DNA barcoding in native plants of the Labiatae (Lamiaceae) family from Chios Island (Greece) and the adjacent Çeşme-Karaburun Peninsula (Turkey)’, Molecular Ecology Resources, 12 (4), 620-33.

Thiemann, T. C., et al. (2012), ‘Development of a high-throughput microsphere-based molecular assay to identify 15 common bloodmeal hosts of Culex mosquitoes’, Molecular Ecology Resources, 12 (2), 238-46.

Thonar, C., Erb, A., and Jansa, J. (2012), ‘Real-time PCR to quantify composition of arbuscular mycorrhizal fungal communities marker design, verification, calibration and field validation’, Molecular Ecology Resources, 12 (2), 219-32.

Tikochinski, Y., et al. (2012), ‘Mitochondrial DNA STR analysis as a tool for studying the green sea turtle (Chelonia mydas) populations: The Mediterranean Sea case study’, Marine Genomics, 6 (0), 17-24.

Toju, Hirokazu, et al. (2012), ‘High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples’, PLoS ONE, 7 (7), e40863.



Ujvarosi, L. and Balint, M. (2012), ‘Discovery of the second European Amalopis species: an integrative survey of the widespread Pedicia (Amalopis) occulta (Meigen, 1830) (Insecta, Diptera, Pediciidae)’, Zootaxa, (3189), 1-28.

Valdez-Moreno, Martha, et al. (2012), ‘Monitoring an Alien Invasion: DNA Barcoding and the Identification of Lionfish and Their Prey on Coral Reefs of the Mexican Caribbean’, PLoS ONE, 7 (6), e36636.

Van der Bank, H. F., et al. (2012), ‘DNA barcoding reveals micro-evolutionary changes and river system-level phylogeographic resolution of African silver catfish, Schilbe intermedius (Actinopterygii: Siluriformes, Schilbeidae) from seven populations across different African river systems’, Acta Ichthyologica Et Piscatoria, 42 (4), 307-20.

van Nieukerken, E. J., et al. (2012), ‘DNA barcoding of the leaf-mining moth subgenus Ectoedemia s. str. (Lepidoptera: Nepticulidae) with COI and EF1-alpha: two are better than one in recognising cryptic species’, Contributions to Zoology, 81 (1), 1-24.

van Nieukerken, Erik, et al. (2012), ‘Antispila oinophylla new species (Lepidoptera, Heliozelidae), a new North American grapevine leafminer invading Italian vineyards: taxonomy, DNA barcodes and life cycle’, ZooKeys, 170 (0), 29-77.

van Velzen, Robin, et al. (2012), ‘DNA Barcoding of Recently Diverged Species: Relative Performance of Matching Methods’, PLoS ONE, 7 (1), e30490.

Vanhaecke, Delphine, et al. (2012), ‘DNA Barcoding and Microsatellites Help Species Delimitation and Hybrid Identification in Endangered Galaxiid Fishes’, PLoS ONE, 7 (3), e32939.

Varela, Andrea, Ritchie, Peter, and Smith, Peter (2012), ‘Low levels of global genetic differentiation and population expansion in the deep-sea teleost Hoplostethus atlanticus revealed by mitochondrial DNA sequences’, Marine Biology, 1-12.

Vargas, Sergio, et al. (2012), ‘Barcoding Sponges: An Overview Based on Comprehensive Sampling’, PLoS ONE, 7 (7), e39345.

Veijalainen, Anu, et al. (2012), ‘Unprecedented ichneumonid parasitoid wasp diversity in tropical forests’, Proceedings of the Royal Society B: Biological Sciences, 279 (1748), 4694-98.

Vences, Miguel, et al. (2012), ‘DNA Barcoding Amphibians and Reptiles’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 79-107.

Vences, Miguel, et al. (2012), ‘External morphology of the tadpoles of the Malagasy treefrog Boophis luteus: ontogenetic variation of keratodont numbers and uniformity between genealogical lineages’, Herpetology Notes, 5, 325-34.

Vergilino, Roland, et al. (2012), ‘Genome size differences in Hyalella cryptic species’, Genome, 134-39.

Vervoort, Mariëtte T. W., et al. (2012), ‘SSU Ribosomal DNA-Based Monitoring of Nematode Assemblages Reveals Distinct Seasonal Fluctuations within Evolutionary Heterogeneous Feeding Guilds’, PLoS ONE, 7 (10), e47555.

Victor, B. C. (2012), ‘Hypoplectrus floridae n. sp. and Hypoplectrus ecosur n. sp., two new Barred Hamlets from the Gulf of Mexico (Pisces: Serranidae): more than 3% different in COI mtDNA sequence from the Caribbean Hypoplectrus species flock’, Journal of the Ocean Science Foundation, 5, 1-19.

Viertel, B., et al. (2012), ‘The stream-dwelling larva of the Ruwenzori River Frog, Amietia ruwenzorica, its buccal cavity and pathology of chytridiomycosis’, Zootaxa, (3400), 43-57.

Vinoth, R., et al. (2012), ‘First Record of Yellowbelly Damselfish Amblyglyphidodon leucogaster (Bleeker, 1847) from the Lakshadweep, India’, World Journal of Fish and Marine Sciences, 4 (1), 7-10.

Virgilio, Massimiliano, et al. (2012), ‘Identifying Insects with Incomplete DNA Barcode Libraries, African Fruit Flies (Diptera: Tephritidae) as a Test Case’, PLoS ONE, 7 (2), e31581.

Viricel, A. and Rosel, P. E. (2012), ‘Evaluating the utility of cox1 for cetacean species identification’, Marine Mammal Science, 28 (1), 37-62.

Voigt, Oliver, Eichmann, Vincent, and Wörheide, Gert (2012), ‘First evaluation of mitochondrial DNA as a marker for phylogeographic studies of Calcarea: a case study from Leucetta chagosensis’, Hydrobiologia, 687 (1), 101-06.

Vu, Thuy Duong, et al. (2012), ‘A laboratory information management system for DNA barcoding workflows’, Integrative Biology, 4 (7), 744-55.

Vuataz, Laurent, et al. (2012), ‘Endemism and diversification in freshwater insects of Madagascar revealed by coalescent and phylogenetic analysis of museum and field collections’, Molecular Phylogenetics and Evolution, online early (0).



Waldner, Thomas and Traugott, Michael (2012), ‘DNA-based analysis of regurgitates: a noninvasive approach to examine the diet of invertebrate consumers’, Molecular Ecology Resources.

Wallace, Lauren J., et al. (2012), ‘DNA barcodes for everyday life: Routine authentication of Natural Health Products’, Food Research International, 49 (1), 446-52.

Wallinger, Corinna, et al. (2012), ‘The effect of plant identity and the level of plant decay on molecular gut content analysis in a herbivorous soil insect’, Molecular Ecology Resources.

Wang, C. Y., Feng, Y., and Chen, X. M. (2012), ‘[DNA barcoding analysis of processed medicinal insect Catharsius molossus]’, Dongwuxue Yanjiu, 33 (6), 597-602.

Wang, N. A., et al. (2012), ‘DNA barcoding of Nyssaceae (Cornales) and taxonomic issues’, Botanical Studies, 53 (2), 265-74.

Wang, Zhong-Duo, et al. (2012), ‘DNA barcoding South China Sea fishes’, Mitochondrial DNA, 23 (5), 405-10.

Wang, Gang, et al. (2012), ‘Identifying the Main Mosquito Species in China Based on DNA Barcoding’, PLoS ONE, 7 (10), e47051.

Ward, Robert D. (2012), ‘FISH-BOL, A Case Study for DNA Barcodes’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 423-39.

Webb, Jeffrey M., et al. (2012), ‘A DNA Barcode Library for North American Ephemeroptera: Progress and Prospects’, PLoS ONE, 7 (5), e38063.

Webster, Bonnie L., et al. (2012), ‘DNA barcoding of Schistosoma haematobium on Zanzibar reveals substantial genetic diversity and two major phylogenetic groups’, Acta Tropica, (0).

Webster, Bonnie L., et al. (2012), ‘Genetic Diversity within Schistosoma haematobium: DNA Barcoding Reveals Two Distinct Groups’, PLoS Negl Trop Dis, 6 (10), e1882.

Weigand, A.M., Götze, M.-C., and Jochum, A. (2012), ‘Outdated but established?! Conchologically driven species delineations in microgastropods (Carychiidae, Carychium)’, Organisms Diversity & Evolution, 12 (4), 377-86.

Weigt, Lee A., et al. (2012), ‘DNA Barcoding Fishes’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858: Humana Press), 109-26.

Weigt, Lee A., et al. (2012), ‘Introduction to Animal DNA Barcoding Protocols’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (858; New York: Humana Press), 11-16.

Weigt, Lee A., et al. (2012), ‘Using DNA Barcoding to Assess Caribbean Reef Fish Biodiversity: Expanding Taxonomic and Geographic Coverage’, PLoS ONE, 7 (7), e41059.

Weis, Andrea and Melzer, Roland R. (2012), ‘How did sea spiders recolonize the Chilean fjords after glaciation? DNA barcoding of Pycnogonida, with remarks on phylogeography of Achelia assimilis (Haswell, 1885)’, Systematics and Biodiversity, 10 (3), 361-74.

Werner, D., et al. (2012), ‘Two invasive mosquito species Ades albopictus and Aedes japonicus japonicus, trapped in South-West Germany, July to August 2011’, Eurosurveillance, 17 (4), 20067.

Wesener, T. (2012), ‘Nearctomeris, a new genus of Pill Millipedes from North America, with a comparison of genetic distances of American Pill Millipede Genera (Glomerida, Glomeridae)’, Zootaxa, (3258), 58-68.

Whang, Ilson, Kang, Hyun-Sil, and Lee, Jehee (2012), ‘Identification of scuticociliates (Pseudocohnilembus persalinus, P. longisetus, Uronema marinum and Miamiensis avidus) based on the cox1 sequence’, Parasitology International, 62 (1), 7-13.

Wheeler, Q. D., et al. (2012), ‘Mapping the biosphere: exploring species to understand the origin, organization and sustainability of biodiversity’, Systematics and Biodiversity, 10 (1), 1-20.

White, W. T. and Last, P. R. (2012), ‘A review of the taxonomy of chondrichthyan fishes: a modern perspective’, Journal of Fish Biology.

Whitfield, James, et al. (2012), ‘Mariapanteles (Hymenoptera, Braconidae), a new genus of Neotropical microgastrine parasitoid wasp discovered through biodiversity inventory’, ZooKeys, 208 (0), 61-80.

Wildish, D. J., Pavesi, L., and Ketmaier, V. (2012), ‘Talitrid amphipods (Crustacea: Amphipoda: Talitridae) and the driftwood ecological niche: a morphological and molecular study’, Journal of Natural History, 46 (43-44), 2677-700.

Williams, Rachel C., Newman, Stephen J., and Sinclair, William (2012), ‘DNA barcoding in Nautilus pompilius (Mollusca : Cephalopoda): evolutionary divergence of an ancient species in modern times’, Invertebrate Systematics, 26 (6), 548-60.

Williams, Paul H., et al. (2012), ‘Cryptic Bumblebee Species: Consequences for Conservation and the Trade in Greenhouse Pollinators’, PLoS ONE, 7 (3), e32992.

Williams, Paul H., et al. (2012), ‘Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae)’, Systematics and Biodiversity, 10 (1), 21-56.

Wilson, J.J. (2012), ‘DNA Barcodes for Insects’, in W. John Kress and David L. Erickson (eds.), DNA Barcodes Methods and Protocols (Methods in Molecular Biology, 858; New York: Humana Press).

Wolinsky, Howard (2012), ‘Wildlife forensics’, EMBO Rep, 13 (4), 308-12.

Wubet, Tesfaye, et al. (2012), ‘Differences in Soil Fungal Communities between European Beech (Fagus sylvatica L.) Dominated Forests Are Related to Soil and Understory Vegetation’, PLoS ONE, 7 (10), e47500.



Xia, Y., et al. (2012), ‘COI is better than 16S rRNA for DNA barcoding Asiatic salamanders (Amphibia: Caudata: Hynobiidae)’, Molecular Ecology Resources, 12 (1), 48-56.

Yamamoto, Naomichi, et al. (2012), ‘Particle-size distributions and seasonal diversity of allergenic and pathogenic fungi in outdoor air’, ISME J, 6 (10), 1801-11.

Yanez, Beatriz and Carrera, Luis Fernando (2012), ‘Reestablishment of Notopygos megalops McIntosh, description of N. caribea sp. n. from the Greater Caribbean and barcoding of “amphiamerican” Notopygos species (Annelida, Amphinomidae)’, ZooKeys, 223 (0), 69-84.

Yang, Fan, et al. (2012), ‘Genetic diversity and DNA barcoding of mudskipper common species along southeast coasts of China’, Shengtaixue Zazhi, 31 (3), 676-83.

Yang, J.-B., et al. (2012), ‘Applying plant DNA barcodes to identify species of Parnassia (Parnassiaceae)’, Molecular Ecology Resources, 12 (2), 267-75.

Yang, Han-Qi, et al. (2012), ‘A Preliminary Assessment of matK, rbcL and trnH/psbA as DNA Barcodes for Calamus (Arecaceae) Species in China with a Note on ITS’, Annales Botanici Fennici, 49 (5-6), 319-30.

Yang, Qianqian, et al. (2012), ‘Diagnosis of Liposcelis entomophila (Insecta: Psocodea: Liposcelididae) based on morphological characteristics and DNA barcodes’, Journal of Stored Products Research, 48 (0), 120-25.

Yang, Cong-Hui, et al. (2012), ‘Species identification of Noctuidae moths (Insecta: Lepidoptera) from Baihuashan, Beijing, China with DNA barcoding’, ACTA ENTOMOLOGICA SINICA, 55 (9), 1082-92.

Yang, Zhaofu, et al. (2012), ‘DNA barcoding and morphology reveal three cryptic species of Anania (Lepidoptera: Crambidae: Pyraustinae) in North America, all distinct from their European counterpart’, Systematic Entomology, 37 (4), 686-705.

Yassin, A., et al. (2012), ‘The Drosophilidae (Diptera) of the Scattered Islands, with the description of a novel association with Leptadenia madagascariensis Decne. (Apocynaceae)’, Fly, 6 (4), 298-302.

Yessoufou, Kowiyou, Daru, Barnabas H., and Davies, T. Jonathan (2012), ‘Phylogenetic Patterns of Extinction Risk in the Eastern Arc Ecosystems, an African Biodiversity Hotspot’, PLoS ONE, 7 (10), e47082.

Yoccoz, Nigel G. (2012), ‘The future of environmental DNA in ecology’, Molecular Ecology, 21 (8), 2031-38.

Yoccoz, N. G., et al. (2012), ‘DNA from soil mirrors plant taxonomic and growth form diversity’, Molecular Ecology, 21 (15), 3647-55.

Young, Monica R., Behan-Pelletier, Valerie M., and Hebert, Paul D. N. (2012), ‘Revealing the Hyperdiverse Mite Fauna of Subarctic Canada through DNA Barcoding’, PLoS ONE, 7 (11), e48755.

Yu, Douglas W., et al. (2012), ‘Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring’, Methods in Ecology and Evolution, 3 (4), 613-23.

Zapata, S., et al. (2012), ‘Morphometric and molecular characterization of the series Guyanensis (Diptera, Psychodidae, Psychodopygus) from the Ecuadorian Amazon Basin with description of a new species’, Infection, Genetics and Evolution, 12 (5), 966-77.

Zarzoso-Lacoste, Diane, Corse, Emmanuel, and Vidal, Eric (2012), ‘Improving PCR detection of prey in molecular diet studies: importance of group-specific primer set selection and extraction protocol performances’, Molecular Ecology Resources.

Zaya, David N. and Ashley, Mary V. (2012), ‘Plant Genetics for Forensic Applications’, in N.J. Sucher, J.R. Hennell, and M.C. Carles (eds.), Plant DNA Fingerprinting and Barcoding (Methods in Molecular Biology, 862), 35-52.

Zeng, Z. Q., et al. (2012), ‘Selection of a DNA barcode for Nectriaceae from fungal whole-genomes’, Science China-Life Sciences, 55 (1), 80-88.

Zhang, Junbin and Hanner, Robert (2012), ‘Molecular Approach to the Identification of Fish in the South China Sea’, PLoS ONE, 7 (2), e30621.

Zhang, Di, et al. (2012), ‘Genetic diversity of Neosalanx taihuensis based on mitochondrial COI sequences’, Hupo Kexue, 24 (2), 299-306.

Zhang, C.Y., et al. (2012), ‘Testing DNA barcoding in closely related groups of Lysimachia L. (Myrsinaceae)’, Molecular Ecology Resources, 12 (1), 98-108.

Zhang, Ai-bing, et al. (2012), ‘A New Method for Species Identification via Protein-Coding and Non-Coding DNA Barcodes by Combining Machine Learning with Bioinformatic Methods’, PLoS ONE, 7 (2), e30986.

Zhang, B., et al. (2012), ‘[Locality identification of Chinese medicinal plant Scutellaria baicalensis (Lamiaceae) population-level DNA barcoding]’, Zhongguo Zhong Yao Za Zhi, 37 (8), 1100-6.

Zhou, Zhi Jun, et al. (2012), ‘Molecular identification supports most traditional morphological species of Ruspolia (Orthoptera : Conocephalinae)’, Invertebrate Systematics, 26 (6), 451-56.

Zhou, Changqing, et al. (2012), ‘Identification of Lygus hesperus by DNA Barcoding Reveals Insignificant Levels of Genetic Structure among Distant and Habitat Diverse Populations’, PLoS ONE, 7 (3), e34528.

Zhou, Mei-Jiao, et al. (2012), ‘Molecular approaches identify known species, reveal cryptic species and verify host specificity of Chinese Philotrypesis (Hymenoptera: Pteromalidae)’, Molecular Ecology Resources, 12 (4), 598-606.

Zou, S., Li, Q., and Kong, L. (2012), ‘Multigene Barcoding and Phylogeny of Geographically Widespread Muricids (Gastropoda: Neogastropoda) Along the Coast of China’, Mar Biotechnol (NY), 14 (1), 21-34.

Zou, Shanmei, Li, Qi, and Kong, Lingfeng (2012), ‘Monophyly, Distance and Character Based Multigene Barcoding Reveal Extraordinary Cryptic Diversity in Nassarius: A Complex and Dangerous Community’, PLoS ONE, 7 (10), e47276.

Zuccon, Dario, et al. (2012), ‘An optimised protocol for barcoding museum collections of decapod crustaceans: a case-study for a 10-40-years-old collection’, Invertebrate Systematics, 26 (6), 592-600.






Abe H, Hayano A, Inoue-Murayama M (2011) Forensic species identification of large macaws using DNA barcodes and microsatellite profiles. Molecular Biology Reports 39: 693-699

Aebi A, Brown PMJ, De Clercq P, Hautier L, Howe A, Ingels B, Ravn HP, Sloggett JJ, Zindel R, Thomas A (2011) Detecting arthropod intraguild predation in the field. Biocontrol 56: 429-440

Albu M, Nikbakht H, Hajibabaei M, Hickey D (2011) The DNA Barcode Linker. Molecular Ecology Resources 11: 84-88

Allcock AL, Barratt I, Eleaume M, Linse K, Norman MD, Smith PJ, Steinke D, Stevens DW, Strugnell J (2011) Cryptic speciation and the circumpolarity debate: a case study on endemic Southern Ocean octopuses using the COI barcode of life. Deep Sea Research Part II: Topical Studies in Oceanography 58: 242-249

Alper I, Frenette M, Labrie S (2011) Ribosomal DNA polymorphisms in the yeast Geotrichum candidum. Fungal Biol 115: 1259-1269

Al-Qurainy F, Khan S, Tarroum M, Al-Hemaid FM, Ali MA (2011) Molecular authentication of the medicinal herb Ruta graveolens (Rutaceae) and an adulterant using nuclear and chloroplast DNA markers. Genet Mol Res 10: 2806-2816

Andersen K, Bird KL, Rasmussen M, Haile J, Breuning-Madsen H, Kjaer KH, Orlando L, Gilbert MTP, Willerslev E (2011) Meta-barcoding of ‘dirt’ DNA from soil reflects vertebrate biodiversity. Molecular Ecology: no

April J, Mayden RL, Hanner RH, Bernatchez L (2011) Genetic calibration of species diversity among North America’s freshwater fishes. Proceedings of the National Academy of Sciences of the United States of America 108: 10602-10607

Aquilino SVL, Tango JM, Fontanilla IKC, Pagulayan RC, Basiao ZU, Ong PS, Quilang JP (2011) DNA barcoding of the ichthyofauna of Taal Lake, Philippines. Molecular Ecology Resources 11: 612-619

Aquino LM, Tango JM, Canoy RJ, Fontanilla IK, Basiao ZU, Ong PS, Quilang JP (2011) DNA barcoding of fishes of Laguna de Bay, Philippines. Mitochondrial DNA 22: 143-153

Arami S, Sato M, Futo S (2011) Applicability of DNA barcode for identification of fish species. Shokuhin Eiseigaku Zasshi 52: 205-210

Arango CP, Soler-Membrives A, Miller KJ (2011) Genetic differentiation in the circum–Antarctic sea spider Nymphon australe (Pycnogonida; Nymphonidae). Deep Sea Research Part II: Topical Studies in Oceanography 58: 212-219

Archaux FL, A. (2011) Découverte de Thera vetustata ([Denis & Schiffermüller], 1775) dans le Loiret, espèce nouvelle pour la région Centre. Alexanor 24: 45-49

Ardura A, Planes S, Garcia-Vazquez E (2011) Beyond Biodiversity: Fish Metagenomes. PLoS ONE 6

Arif IA, Khan HA, Al Sadoon M, Shobrak M (2011) Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals. Genet Mol Res 10

Arif IA, Khan HA, Shobrak M, Williams J (2011) Cytochrome c oxidase subunit I barcoding of the green bee-eater (Merops orientalis). Genet Mol Res 10

Asgharian H, Sahafi HH, Ardalan AA, Shekarriz S, Elahi E (2011) Cytochrome c oxidase subunit 1 barcode data of fish of the Nayband National Park in the Persian Gulf and analysis using meta-data flag several cryptic species. Molecular Ecology Resources 11: 461-472

Ashfaq M, Ara J, Noor AR, Hebert PDN, Mansoor S (2011) Molecular phylogenetic analysis of a scale-like insect infesting mango orchards in Pakistan. European Journal of Entomology

Astrin JJ, Stuben PE, Misof B, Wolfgang Wagele J, Gimnich F, Raupach MJ, Ahrens D (2011) Exploring diversity in cryptorhynchine weevils (Coleoptera) using distance-, character- and tree-based species delineation. Mol Phylogenet Evol


Bafeel SO, Arif IA, Bakir MA, Khan HA, Al Farhan AH, Al Homaidan AA, Ahamed A, Thomas J (2011) Comparative evaluation of PCR success with universal primers of maturase K (matK) and ribulose-1, 5-bisphosphate carboxylase oxygenase large subunit (rbcL) for barcoding of some arid plants. Plant Omics 4: 195-198

Baird DJ, Pascoe TJ, Zhou X, Hajibabaei M (2011) Building freshwater macroinvertebrate DNA-barcode libraries from reference collection material: formalin preservation vs specimen age. Journal of the North American Benthological Society 30: 125-130

Baird DJ, Sweeney BW (2011) Applying DNA barcoding in benthology: the state of the science. Journal of the North American Benthological Society 30: 122-124

Baird DJ, Sweeney BW (2011) DNA barcoding: genomic solutions for benthology. Journal of the North American Benthological Society 30: 122-231

Baldwin C, Castillo C, Weigt L, Victor B (2011) Seven new species within western Atlantic Starksia atlantica, S. lepicoelia, and S. sluiteri (Teleostei, Labrisomidae), with comments on congruence of DNA barcodes and species. Zookeys 79: 21-72

Barr NB, Ledezma LA, Farris RE, Epstein ME, Gilligan TM (2011) A multiplex real-time polymerase chain reaction assay to diagnose Epiphyas postvittana (Lepidoptera: Tortricidae). J Econ Entomol 104: 1706-1719

Becker S, Hanner R, Steinke D (2011) Five years FISH-BOL – brief status report. Mitochondrial DNA 22(S1): 3-9

Bell D, Long DG, Forrest AD, Hollingsworth ML, Blom HH, Hollingsworth PM (2011) DNA barcoding of European Herbertus (Marchantiopsida, Herbertaceae) and the discovery and description of a new species. Molecular Ecology Resources online early

Bellstedt DU, Pirie MD, Visser JC, de Villiers MJ, Gehrke B (2011) A rapid and inexpensive method for the direct PCR amplification of DNA from plants. Am J Bot 97: e65-68

Bennett CE, Wilson BS, Desalle R (2011) DNA barcoding of an invasive mammal species, the small Indian mongoose (Herpestes javanicus; E. Geoffroy Saint-Hillaire 1818) in the Caribbean and Hawaiian Islands. Mitochondrial DNA 22: 12-18

Bennett KF, Reed AJ, Lutz RA (2011) DNA barcoding reveals Brachidontes (Bivalvia: Mytilidae) from two ecologically distinct intertidal habitats on Long Key, Florida Keys, are cryptic species, not ecotypes. Nautilus 125: 63-71

Bertolani R, Rebecchi L, Giovannini I, Cesari M (2011) DNA barcoding and integrative taxonomy of Macrobiotus hufelandi CAS Schultze 1834, the first tardigrade species to be described, and some related species. Zootaxa: 19-36

Betson M, Halstead FD, Nejsum P, Imison E, Khamis IS, Sousa-Figueiredo JC, Rollinson D, Stothard JR (2011) A molecular epidemiological investigation of Ascaris on Unguja, Zanzibar using isoenyzme analysis, DNA barcoding and microsatellite DNA profiling. Trans R Soc Trop Med Hyg

Bhadury P, Annapuma C (2011) Marine barcoding- how will it help Indian marine benthic studies? Indian Journal of Geo-Marine Sciences 40: 645-647

Birky CW, Ricci C, Melone G, Fontaneto D (2011) Integrating DNA and morphological taxonomy to describe diversity in poorly studied microscopic animals: new species of the genus Abrochtha Bryce, 1910 (Rotifera: Bdelloidea: Philodinavidae). Zoological Journal of the Linnean Society 161: 723-734

Bitanyi S, Bjørnstad G, Ernest EM, Nesje M, Kusiluka LJ, Keyyu JD, Mdegela RH, Røed KH (2011) Species identification of Tanzanian antelopes using DNA barcoding. Molecular Ecology Resources 11: 442-449

Boehme P, Amendt J, Zehner R (2011) The use of COI barcodes for molecular identification of forensically important fly species in Germany. Parasitology Research

Boissin E, Stoehr S, Chenuil A (2011) Did vicariance and adaptation drive cryptic speciation and evolution of brooding in Ophioderma longicauda (Echinodermata: Ophiuroidea), a common Atlanto-Mediterranean ophiuroid? Molecular Ecology Bonnet T, Slagsvold PK, Saetre GP (2011) Genetic species identification of a Collared Pied Flycatcher from Norway. Journal of Ornithology 152: 1069-1073

Boring CA, Sharanowski BJ, Sharkey MJ (2011) Maxfischeriinae: a new braconid subfamily (Hymenoptera) with highly specialized egg morphology. Systematic Entomology 36: 529-548

Bottger-Schnack R, Machida RJ (2011) Comparison of morphological and molecular traits for species identification and taxonomic grouping of oncaeid copepods. Hydrobiologia 666: 111-125

Boyer S, Blakemore RJ, Wratten SD (2011) An integrative taxonomic approach to the identification of three new New Zealand endemic earthworm species (Acanthodrilidae, Octochaetidae: Oligochaeta). Zootaxa: 21-32

Boyer SL, Howe AA, Juergens NW, Hove MC (2011) CSI Freshwater Mussels: Using DNA Barcoding to Identify Microscopic Animals. Integrative and Comparative Biology 51: E15-E15

Boyer SL, Howe AA, Juergens NW, Hove MC (2011) A DNA-barcoding approach to identifying juvenile freshwater mussels (Bivalvia:Unionidae) recovered from naturally infested fishes. Journal of the North American Benthological Society 30: 182-194

Briski E, Cristescu ME, Bailey SA, MacIsaac HJ (2011) Use of DNA barcoding to detect invertebrate invasive species from diapausing eggs. Biological Invasions 13: 1325-1340

Brix S, Riehl T, Leese F (2011) First genetic data for species of the genus Haploniscus Richardson, 1908 (Isopoda: Asellota: Haploniscidae) from neighbouring deep-sea basins in the South Atlantic. Zootaxa: 79-84

Brown DS, Jarman SN, Symondson WOC (2011) Pyrosequencing of prey DNA in reptile faeces: analysis of earthworm consumption by slow worms. Molecular Ecology Resources: no

Buchheim MA, Keller A, Koetschan C, Forster F, Merget B, Wolf M (2011) Internal Transcribed Spacer 2 (nu ITS2 rRNA) Sequence-Structure Phylogenetics: Towards an Automated Reconstruction of the Green Algal Tree of Life. PLoS ONE 6: e16931

Bucklin A, Steinke D, Blanco-Bercial L (2011) DNA Barcoding of Marine Metazoa. Annual Review of Marine Science 3: 471-508

Budarf AC, Burfeind DD, Loh WKW, Tibbetts IR (2011) Identification of seagrasses in the gut of a marine herbivorous fish using DNA barcoding and visual inspection techniques. Journal of Fish Biology 79: 112-121

Burgess KS, Fazekas AJ, Kesanakurti PR, Graham SW, Husband BC, Newmaster SG, Percy DM, Hajibabaei M, Barrett SCH (2011) Discriminating plant species in a local temperate flora using the rbcL plus matK DNA barcode. Methods in Ecology and Evolution 2: 333-340

Caballero S, Cardenosa D, Soler G, Hyde J (2011) Application of multiplex PCR approaches for shark molecular identification: feasibility and applications for fisheries management and conservation in the Eastern Tropical Pacific. Molecular Ecology Resources

Cai Y, Liang Z, Shen F, Zhang W, Hou R, Yue B, Li J, Zhang Z (2011) DNA barcoding of 18 species of Bovidae. Chinese Science Bulletin 56: 164-168

Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N, Knight R (2011) Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proceedings of the National Academy of Sciences 108 Suppl 1: 4516-4522

Carew ME, Marshall SE, Hoffmann AA (2011) A combination of molecular and morphological approaches resolves species in the taxonomically difficult genus Procladius Skuse (Diptera: Chironomidae) despite high intra-specific morphological variation. Bulletin of Entomological Research 101: 505-519

Carr CM (2011) The Polychaeta of Canada: Exploring diversity and distribution patterns using DNA barcodes. MSc. Department of Integrative Biology, Guelph

Carr CM (2011) Polychaete diversity and distribution patterns in Canadian marine waters. Marine Biodiversity online early

Carr CM, Hardy SM, Brown TM, Macdonald TA, Hebert PDN (2011) A Tri-Oceanic Perspective: DNA Barcoding Reveals Geographic Structure and Cryptic Diversity in Canadian Polychaetes. PLoS ONE 6: e22232


Carreon-Martinez L, Johnson TB, Ludsin SA, Heath DD (2011) Utilization of stomach content DNA to determine diet diversity in piscivorous fishes. Journal of Fish Biology early view

Carrera-Parra LF, Salazar-Vallejo SI (2011) Redescriptions of Eunice filamentosa and E. denticulata and description of E. tovarae n. sp. (Polychaeta: Eunicidae), highlighted with morphological and molecular data. Zootaxa: 51-64

Cawthorn DM, Steinman HA, Witthuhn RC (2011) Establishment of a mitochondrial DNA sequence database for the identification of fish species commercially available in South Africa. Molecular Ecology Resources 11: 979-991

Ceccarelli FS, Sharkey MJ, Zaldívar-Riverón A (2011) Species identification in the taxonomically neglected, highly diverse, neotropical parasitoid wasp genus notiospathius (Braconidae: Doryctinae) based on an integrative molecular and morphological approach. Molecular Phylogenetics and Evolution

Cervantes FA, Arcangeli J, Hortelano-Moncada Y, Borisenko AV (2011) DNA barcodes effectively identify the morphologically similar Common Opossum (Didelphis marsupialis) and Virginia Opossum (Didelphis virginiana) from areas of sympatry in Mexico. Mitochondrial DNA 21: 44-50

Cesari M, Giovannini I, Bertolani R, Rebecchi L (2011) An example of problems associated with DNA barcoding in tardigrades: a novel method for obtaining voucher specimens. Zootaxa: 42-51

Chandra NS, Wulff EG, Udayashankar AC, Nandini BP, Niranjana SR, Mortensen CN, Prakash HS (2011) Prospects of molecular markers in Fusarium species diversity. Appl Microbiol Biotechnol

Chaveerach A, Tanee T, Sudmoon R (2011) Molecular Identification and Barcodes for the Genus Nymphaea. Acta Biologica Hungarica 62: 328-340

Chaves PB, Graeff VG, Lion MB, Oliveira LR, Eizirik E (2011) DNA barcoding meets molecular scatology: short mtDNA sequences for standardized species assignment of carnivore noninvasive samples. Molecular Ecology Resources online early

Che J, Chen HM, Yang J-X, Jin J-Q, Jiang K, Yuan Z-Y, Murphy RW, Zhang Y (2011) Universal COI primers for DNA barcoding amphibians. Molecular Ecology Resources: no

Chee SY, Devakie MN, Siti Azizah MN (2011) Phylogenetic study and barcoding of the blood cockle, Tegillarca granosa, found on the west coast of peninsular Malaysia using the COI gene. Genet Mol Res 10: 1237-1244

Chen J, Li Q, Kong L, Yu H (2011) How DNA Barcodes Complement Taxonomy and Explore Species Diversity: The Case Study of a Poorly Understood Marine Fauna. PLoS ONE 6: e21326

Chen ZF, Matsumura K, Wang H, Arellano SM, Yan X, Alam I, Archer JA, Bajic VB, Qian PY (2011) Toward an understanding of the molecular mechanisms of barnacle larval settlement: a comparative transcriptomic approach. PLoS ONE 6: e22913

Chi Y, Zhi Y, Wang S-d, Zhang C-t (2011) The DNA barcoding of COI gene in some species of Tachininae (Diptera. Tachinidae). Shenyang Shifan Daxue Xuebao Ziran Kexue Ban 29

Cho Y, Choi DS, Han YG, Nam SH (2011) Conservation of Hipparchia autonoe (Esper) (Lepidoptera: Nymphalidae), Natural Monument in South Korea. Entomological Research 41: 269-274

Christ S, Wubet T, Theuerl S, Herold N, Buscot F (2011) Fungal communities in bulk soil and stone compartments of different forest and soil types as revealed by a barcoding ITS rDNA and a functional laccase encoding gene marker. Soil Biology & Biochemistry 43: 1292-1299

Chu H, Fierer N, Lauber CL, Caporaso JG, Knight R, Grogan P (2011) Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes. Environ Microbiol 12: 2998-3006

Clare EL (2011) Cryptic Species? Patterns of Maternal and Paternal Gene Flow in Eight Neotropical Bats. PLoS ONE 6: e21460

Clare EL (2011) Mitochondrial DNA diversity in neotropical bats: Molecular evolution, systematics and biodiversity. Doctoral. Integrative Biology, Guelph

Clare EL, Barber BR, Sweeney BW, Hebert PDN, Fenton MB (2011) Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus). Molecular Ecology online early

Clare EL, Lim BK, Fenton MB, Hebert PDN (2011) Neotropical Bats: Estimating Species Diversity with DNA Barcodes. PLoS ONE 6: e22648

Collevatti RG (2011) Do We Really Need DNA Barcoding? Natureza & Conservacao 9: 105-109

Colombo F, Chessa S, Cattaneo P, Bernardi C (2011) Polymerase chain reaction products (PCR) on “DNA barcode zone” resolved by temporal temperature gradient electophoresis: A tool for species identification of mixed meat specimens – A technical note on preliminary results. Food Control 22: 1471-1472

Cordell GA (2011) Phytochemistry and traditional medicine – A revolution in process. Phytochemistry Letters 4: 391-398

Cordell GA (2011) Sustainable Medicines and Global Health Care. Planta Medica 77: 1129-1138

Correa AC, Escobar JS, Noya O, Velasquez LE, Gonzalez-Ramirez C, Hurtrez-Bousses S, Pointier JP (2011) Morphological and molecular characterization of Neotropic Lymnaeidae (Gastropoda: Lymnaeoidea), vectors of fasciolosis. Infect Genet Evol

Costion C, Ford A, Cross H, Crayn D, Harrington M, Lowe A (2011) Plant DNA barcodes can accurately estimate species richness in poorly known floras. PLoS ONE 6: e26841

Coulson MW, Denti D, Van Guelpen L, Miri C, Kenchington E, Bentzen P (2011) DNA barcoding of Canada’s skates. Molecular Ecology Resources 11: 968-978

Crawford AJ, Alonso R, Jaramillo CA, Sucre S, Ibanez R (2011) DNA barcoding identifies a third invasive species of Eleutherodactylus (Anura: Eleutherodactylidae) in Panama City, Panama. Zootaxa: 65-67

Cross HB, Lowe AJ, Gurgel CFD (2011) DNA Barcoding of Invasive Species Fifty years of invasion ecology: the legacy of Charles Elton. Blackwell Publishing


Dabert M, Bigos A, Witalinski W (2011) DNA barcoding reveals andropolymorphism in Aclerogamasus species (Acari: Parasitidae). Zootaxa: 13-20

D’Agaro E (2011) Construction of public refence libraries using DNA barcoding techniques for animal and plant specimens. Current Opinion in Biotechnology 22: S25-S25

Dai C-Y, Zhang R-Y, Yin Z-H, Lei F-M (2011) Recognizing species of Paridae by DNA barcodes. Acta Zootaxonomica Sinica 35

Dalton DL, Kotze A (2011) DNA barcoding as a tool for species identification in three forensic wildlife cases in South Africa. Forensic Sci Int 207: E51-E54

Davis GA, Havill NP, Adelman ZN, Caccone A, Kok LT, Salom SM (2011) DNA barcodes and molecular diagnostics to distinguish an introduced and native Laricobius (Coleoptera: Derodontidae) species in eastern North America. Biological Control 58: 53-59

de Carvalho DC, Neto DAP, Brasil BSAF, Oliveira DAA (2011) DNA barcoding unveils a high rate of mislabeling in a commercial freshwater catfish from Brazil. Mitochondrial DNA 22 (S1): 97-105

de Carvalho DC, Oliveira DAA, Pompeu PS, Gontijo Leal C, Oliveira C, Hanner R (2011) Deep barcode divergence in Brazilian freshwater fishes: the case of the São Francisco River basin. Mitochondrial DNA 22 (S1): 80-86

de Groot GA, During HJ, Maas JW, Schneider H, Vogel JC, Erkens RH (2011) Use of rbcL and trnL-F as a Two-Locus DNA Barcode for Identification of NW-European Ferns: An Ecological Perspective. PLoS ONE 6: e16371

de la Parra Venegas R, Hueter R, Gonalez Cano J, Tyminski J, Gregorio Remolina J, Maslanka M, Ormos A, Weigt L, Carlson B, Dove A (2011) An Unprecedented Aggregation of Whale Sharks, Rhincodon typus, in Mexican Coastal Waters of the Caribbean Sea. PLoS ONE 6: e18994

De Mattia F, Bruni I, Galimberti A, Cattaneo F, Casiraghi M, Labra M (2011) A comparative study of different DNA barcoding markers for the identification of some members of Lamiacaea. Food Research International 44: 693-702

Dejean T, Valentini A, Duparc A, Pellier-Cuit S, Pompanon F, Taberlet P, Miaud C (2011) Persistence of Environmental DNA in Freshwater Ecosystems. PLoS ONE 6

Dentinger BTM, Didukh MY, Moncalvo J-M (2011) Comparing COI and ITS as DNA Barcode Markers for Mushrooms and Allies (Agaricomycotina). PLoS ONE 6: e25081

Derocles SAP, Le Ralec A, Plantegenest M, Chaubet B, Cruaud C, Cruaud A, Rasplus JY (2011) Identification of molecular markers for DNA barcoding in the Aphidiinae (Hym. Braconidae). Molecular Ecology Resources

Dettai A, Adamowicz SJ, Allcock AL, Arango CP, Barnes DKA, Barratt I, Chenuil A, Couloux A, Cruaud C, Davis B, Denis F, Denys G, Diaz A, Eleaume M, Feral JP, Froger A, Gallut C, Grant RA, Griffiths HJ, Held C, Hemery LG, Hosie G, Kuklinski P, Lecointre G, Linse K, Lozouet P, Mah C, Monniot F, Norman MD, O’Hara TD, Ozouf-Costaz C, Piedallu C, Pierrat B, Poulin E, Puillandre N, Riddle M, Samadi S, Saucede T, Schubart C, Smith PJ, Stevens DW, Steinke D, Strugnell JM, Tarnowska K, Wadley VA, Ameziane N (2011) Barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Polar Science 5: 298-312

Dettai A, Lautredou A-C, Bonillo C, Goimbault E, Busson F, Causse R, Couloux A, Cruaud C, Duhamel G, Denys G, Hautecoeur M, Iglesias S, Koubbi P, Lecointre G, Moteki M, Pruvost P, Tercerie S, Ozouf C (2011) The actinopterygian diversity of the CEAMARC cruises: Barcoding and molecular taxonomy as a multi-level tool for new findings. Deep Sea Research Part II: Topical Studies in Oceanography 58: 250-263

deWaard JR, Hebert PD, Humble LM (2011) A comprehensive DNA barcode library for the looper moths (Lepidoptera: Geometridae) of british columbia, Canada. PLoS ONE 6: e18290

DeWalt RE (2011) DNA barcoding: a taxonomic point of view. Journal of the North American Benthological Society 30: 174-181

Dinca V, Cuvelier S, Zakharov EV, Hebert PDN, Vila R (2011) Biogeography, ecology and conservation of Erebia oeme (Hubner) in the Carpathians (Lepidoptera: Nymphalidae: Satyrinae). Annales De La Societe Entomologique De France 46: 486-498

Dinca V, Zakharov EV, Hebert PDN, Vila R (2011) Complete DNA barcode reference library for a country’s butterfly fauna reveals high performance for temperate Europe. Proceedings of the Royal Society B: Biological Sciences 278: 347-355

Dong LN, Wortley AH, Wang H, Li DZ, Lu L (2011) Efficiency of DNA barcodes for species delimitation: A case in Pterygiella Oliv. (Orobanchaceae). Journal of Systematics and Evolution 49: 189-202

Doorduin L, Gravendeel B, Lammers Y, Ariyurek Y, Chin-A-Woeng T, Vrieling K (2011) The Complete Chloroplast Genome of 17 individuals of Pest Species Jacobaea vulgaris: SNPs, Microsatellites and Barcoding Markers for Population and Phylogenetic Studies. DNA Research 18: 93-105

Doukakis P, Hanner R, Shivji M, Bartholomew C, Chapman D, Wong E, Amato G (2011) Applying genetic techniques to study remote shark fisheries in northeastern Madagascar. Mitochondrial DNA 22 (S1): 15-20

Drumwright AM, Allen BW, Huff KA, Ritchey PA, Cahoon AB (2011) Survey and DNA Barcoding of Poaceae in Flat Rock Cedar Glades and Barrens State Natural Area, Murfreesboro, Tennessee. Castanea 76: 300-310

Du ZY, Qimike A, Yang CF, Chen JM, Wang QF (2011) Testing four barcoding markers for species identification of Potamogetonaceae. Journal of Systematics and Evolution 49: 246-251

Dupont L, Lazrek F, Porco D, King RA, Rougerie R, Symondson WOC, Livet A, Richard B, Decaens T, Butt KR, Mathieu J (2011) New insight into the genetic structure of the Allolobophora chlorotica aggregate in Europe using microsatellite and mitochondrial data. Pedobiologia 54: 217-224


Ebach MC (2011) Taxonomy and the DNA Barcoding Enterprise. Zootaxa 2742: 67-68

Ebach MC, de Carvalho MR, Nihei SS (2011) Saving our science from ourselves: the plight of biological classification. Revista Brasileira De Entomologia 55: 149-153

Ebach MC, Valdecasas AG, Wheeler QD (2011) Impediments to taxonomy and users of taxonomy: accessibility and impact evaluation. Cladistics 27: 550-557

Elmeer K, McCormick P, Almalki A (2011) Sequencing of Cytochrome C Oxidase Subunit I Gene of Mitochondrial DNA from Chelonia mydas in Qatar. Journal of American Science 7

Elzinga JA, Zwakhals K, Mappes J, Grapputo A (2011) The parasitoid species complex associated with sexual and parthenogenetic Naryciinae (Lepidoptera: Psychidae): Integrating ecological and molecular analyses. European Journal of Entomology 108: 635-650

Emerson BC, Cicconardi F, Fanciulli PP, Shaw PJ (2011) Phylogeny, phylogeography, phylobetadiversity and the molecular analysis of biological communities. Philos Trans R Soc Lond B Biol Sci 366: 2391-2402

Engstrand RC, Cibrian Tovar J, Cibrian-Jaramillo A, Kolokotronis S-O (2011) Genetic variation in avocado stem weevils Copturus aguacatae (Coleoptera: Curculionidae) in Mexico. Mitochondrial DNA 21: 38-43

Escalante P, Desalle R, Kolokotronis S-O (2011) The MexBOL initiative. Mitochondrial DNA 21: 1-2

Escalante P, Ibarra-Vazquez A, Rosas-Escobar P (2011) Tropical montane nymphalids in Mexico: DNA barcodes reveal greater diversity. Mitochondrial DNA 21: 30-37


Feau N, Vialle A, Allaire M, Maier W, Hamelin RC (2011) DNA barcoding in the rust genus Chrysomyxa and its implications for the phylogeny of the genus. Mycologia 103: 1250-1266

Federhen S (2011) Comment on “Birdstrikes and barcoding: can DNA methods help make the airways safer?”. Molecular Ecology Resources 11: 937-938

Feldheim KA, Chapman DD, Simpfendorfer CA, Richards VP, Shivji MS, Wiley TR, Poulakis GR, Carlson JK, Eng R, Sagarese S (2011) Genetic tools to support the conservation of the endangered smalltooth sawfish, Pristis pectinata. Conservation Genetics Resources 2: 105-113

Feng Y, Li Q, Kong LF, Zheng XD (2011) COI-based DNA barcoding of Arcoida species (Bivalvia: Pteriomorphia) along the coast of China. Molecular Ecology Resources 11: 435-441

Fernandez-Triana J, Smith MA, Boudreault C, Goulet H, Hebert PD, Smith AC, Roughley R (2011) A Poorly Known High-Latitude Parasitoid Wasp Community: Unexpected Diversity and Dramatic Changes through Time. PLoS ONE 6: e23719

Freitag H, Balke M (2011) Larvae and a new species of Ancyronyx Erichson, 1847 (Insecta, Coleoptera, Elmidae) from Palawan, Philippines, using DNA sequences for the assignment of the developmental stages. Zookeys 136: 47-82

Fu YM, Jiang WM, Fu CX (2011) Identification of species within Tetrastigma (Miq.) Planch. (Vitaceae) based on DNA barcoding techniques. Journal of Systematics and Evolution 49: 237-245

Fucikova K, Rada JC, Lukesova A, Lewis LA (2011) Cryptic diversity within the genus Pseudomuriella hanagata (Chlorophyta, Chlorophyceae, Sphaeropleales) assessed using four Barcode markers. Nova Hedwigia 93: 29-46


Gabriel F, Noel T, Accoceberry I (2011) Lindnera (Pichia) fabianii blood infection after mesenteric ischemia. Med Mycol

Gaikwad SS, Ghate HV, Ghaskadbi SS, Patole MS, Shouche YS (2011) DNA barcoding of nymphalid butterflies (Nymphalidae: Lepidoptera) from Western Ghats of India. Mol Biol Rep

Gao TX, Ji DP, Xiao YS, Xue TQ, Yanagimoto T, Setoguma T (2011) Description and DNA Barcoding of a New Sillago Species, Sillago sinica (Perciformes: Sillaginidae), from Coastal Waters of China. Zoological Studies 50: 254-263

Geraci CJ, Al-Saffar MA, Zhou X (2011) DNA barcoding facilitates description of unknown faunas: a case study on Trichoptera in the headwaters of the Tigris River, Iraq. Journal of the North American Benthological Society 30: 163-173

Gibbs J (2011) Revision of the metallic species of Lasioglossum (Dialictus) in Canada (Hymenoptera, Halictidae, Halictini). Zootaxa 3073: 4-382

Gibbs J, Albert J, Packer L (2011) Dual origins of social parasitism in North American Dialictus (Hymenoptera: Halictidae) confirmed using a phylogenetic approach. Cladistics: no

Gibbs JJ (2011) Revision of the metallic species of Dialictus in Canada (Hymenoptera: Apoidea: Halictidae: Lasioglossum). Ph.D. Biology, Toronto

Gittenberger A, Gittenberger E (2011) Cryptic, adaptive radiation of endoparasitic snails: sibling species of Leptoconchus (Gastropoda: Coralliophilidae) in corals. Organisms Diversity & Evolution 11: 21-41

Gleason LU, Burton RS (2011) High-throughput molecular identification of fish eggs using multiplex suspension bead arrays. Mol Ecol Resour

Golding R, Colgan D, Nelmes G, Reutelshöfer T (2011) Sympatry and allopatry in the deeply divergent mitochondrial DNA clades of the estuarine pulmonate gastropod genus Phallomedusa (Mollusca, Gastropoda). Marine Biology: 1-11

Gonzalez R, Carrejo N, Wilkerson RC, Alarcon J, Alarcon-Ormasa J, Ruiz F, Bhatia R, Loaiza J, Linton Y-M (2011) Confirmation of Anopheles (Anopheles) calderoni Wilkerson, 1991 (Diptera: Culicidae) in Colombia and Ecuador through molecular and morphological correlation with topotypic material. Memorias do Instituto Oswaldo Cruz 105

Grant RA, Griffiths HJ, Steinke D, Wadley V, Linse K (2011) Antarctic DNA barcoding; a drop in the ocean? Polar Biology 34: 775-780

Greenstone MH, Vandenberg NJ, Hu JH (2011) Barcode haplotype variation in north American agroecosystem lady beetles (Coleoptera: Coccinellidae). Molecular Ecology Resources 11: 629-637

Griffiths KE, Trueman JWH, Brown GR, Peakall R (2011) Molecular genetic analysis and ecological evidence reveals multiple cryptic species among thynnine wasp pollinators of sexually deceptive orchids. Molecular Phylogenetics and Evolution In Press, Accepted Manuscript

Grosjean S, Strauss A, Glos J, Randrianiaina RD, Ohler A, Vences M (2011) Morphological and ecological uniformity in the funnel-mouthed tadpoles of Malagasy litter frogs, subgenus Chonomantis. Zoological Journal of the Linnean Society 162: 149-183

Gu HF, Xia Y, Penga R, Mo BH, Li L, Zenga XM (2011) Authentication of Chinese crude drug gecko by DNA barcoding. Nat Prod Commun 6: 67-71

Gu J, Su JX, Lin RZ, Li RQ, Xiao PG (2011) Testing four proposed barcoding markers for the identification of species within Ligustrum L. (Oleaceae). Journal of Systematics and Evolution 49: 213-224

Guo X, Wang X, Su W, Zhang G, Zhou R (2011) DNA Barcodes for Discriminating the Medicinal Plant Scutellaria baicalensis (Lamiaceae) and Its Adulterants. Biol Pharm Bull 34: 1198-1203

Gupta AK, Harish, Rai MK, Phulwaria M, Shekhawat NS (2011) Isolation of genomic DNA suitable for community analysis from mature trees adapted to arid environment. Gene 487: 156-159


Haider N, Wilkinson MJ (2011) A set of plastid DNA-specific universal primers for flowering plants. Genetika 47: 1204-1215

Hajibabaei M, Shokralla S, Zhou X, Singer GAC, Baird DJ (2011) Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos. PLoS ONE 6: e17497

Hamilton CA, Formanowicz DR, Bond JE (2011) Species Delimitation and Phylogeography of Aphonopelma hentzi (Araneae, Mygalomorphae, Theraphosidae): Cryptic Diversity in North American Tarantulas. PLoS ONE 6: e26207

Hamilton PB, Stevens JR (2011) Resolving relationships between Australian trypanosomes using DNA barcoding data. Trends in Parasitology 27: 99

Hamsher SE, Evans KM, Mann DG, Poulickova A, Saunders GW (2011) Barcoding Diatoms: Exploring Alternatives to COI-5P. Protist 162: 405-422

Han JP, Li MN, Luo K, Liu MZ, Chen XC, Chen SL (2011) [Identification of daturae flos and its adulterants based on DNA barcoding technique]. Yao Xue Xue Bao 46: 1408-1412

Handy SM, Deeds JR, Ivanova NV, Hebert PDN, Hanner R, Ormos A, Weigt LA, Moore MM, Yancy HF (2011) A Single-Laboratory Validated Method for the Generation of DNA Barcodes for the Identification of Fish for Regulatory Compliance. Journal of AOAC International 94: 201-210

Hanner R (2011) DNA Barcoding, a Tool for Species Identification of Eukaryotic Cells in Culture. In Vitro Cellular & Developmental Biology-Animal 47: S3-S3

Hanner R, Becker S, Ivanova NV, Steinke D (2011) FISH-BOL and seafood identification: Geographically dispersed case studies reveal systemic market substitution across Canada. Mitochondrial DNA 22 (S1): 106-122

Hanner R, DeSalle R, Ward RD, Kolokotronis SO (2011) The Fish Barcode of Life (FISH-BOL) special issue. Mitochondrial DNA 22 (S1): 1-2

Hanner R, Floyd R, Bernard A, Collette BB, Shivji M (2011) DNA barcoding of billfishes. Mitochondrial DNA 22 (S1): 27-36

Hardy CM, Adams M, Jerry DR, Court LN, Morgan MJ, Hartley DM (2011) DNA barcoding to support conservation: species identification, genetic structure and biogeography of fishes in the Murray-Darling River Basin, Australia. Marine and Freshwater Research 62: 887-901

Harrower E, Ammirati JF, Cappuccino AA, Ceska O, Kranabetter JM, Kroeger P, Lim S, Taylor T, Berbee ML (2011) Cortinarius species diversity in British Columbia and molecular phylogenetic comparison with European specimen sequences. Botany-Botanique 89: 799-810

Hausdorf B, Wilkens H, Strecker U (2011) Population genetic patterns revealed by microsatellite data challenge the mitochondrial DNA based taxonomy of Astyanax in Mexico (Characidae, Teleostei). Molecular Phylogenetics and Evolution 60: 89-97

Hausmann A, Balke M, Hendrich L, Schmidt S, Segerer AH, Haszprunar G (2011) 5 Fakten zum DNA-Barcoding aus der 2-jährigen Praxis des fauna-Bavarica-Projektes (BFB). Nachrichtenblatt der bayerischen Entomologen 60: in press

Hausmann A, Haszprunar G, Hebert PDN (2011) DNA Barcoding the Geometrid Fauna of Bavaria (Lepidoptera): Successes, Surprises, and Questions. PLoS ONE 6: e17134

Hausmann A, Haszprunar G, Segerer AH, Speidel W, Behounek G, Hebert PDN (2011) Now DNA-barcoded: the butterflies and larger moths of Germany. Spixiana 34

Hausmann A, Huemer P (2011) Taxonomic decision as a compromise: Acasis appensata (Eversmann, 1832 1842 ) in Central Italy – a case of conflicting evidence between DNA barcode and morphology (Lepidoptera: Geometridae). Zootaxa 3070

Havermans C, Nagy ZT, Sonet G, De Broyer C, Martin P (2011) DNA barcoding reveals new insights into the diversity of Antarctic species of Orchomene sensu lato (Crustacea: Amphipoda: Lysianassoidea). Deep Sea Research Part II: Topical Studies in Oceanography 58: 230-241

Hawlitschek O, Porch N, Hendrich L, Balke M (2011) Ecological Niche Modelling and nDNA Sequencing Support a New, Morphologically Cryptic Beetle Species Unveiled by DNA Barcoding. PLoS ONE 6: e16662

Heethoff M, Laumann M, Weigmann G, Raspotnig G (2011) Integrative taxonomy: Combining morphological, molecular and chemical data for species delineation in the parthenogenetic Trhypochthonius tectorum complex (Acari, Oribatida, Trhypochthoniidae). Frontiers in Zoology 8: 2

Heger TJ, Kosakyan A, Lara E, Mitchell EA, Leander B (2011) DNA Barcoding of Protists in Soils: A Case Study Using Arcellinid Testate Amoebae (Amoebozoa). Journal of Phycology 47: S34-S34

Heger TJ, Pawlowski J, Lara E, Leander BS, Todorov M, Golemansky V, Mitchell EAD (2011) Comparing Potential COI and SSU rDNA Barcodes for Assessing the Diversity and Phylogenetic Relationships of Cyphoderiid Testate Amoebae (Rhizaria: Euglyphida). Protist 162: 131-141

Hendrich L, Balke M (2011) A simultaneous journal/wiki publication and dissemination of a new species description: Neobidessodes darwiniensis sp. n. from northern Australia (Coleoptera, Dytiscidae, Bidessini). Zookeys: 11-20

Henrik Nilsson R, Ryberg M, Sjökvist E, Abarenkov K (2011) Rethinking taxon sampling in the light of environmental sequencing. Cladistics 27: 197-203

Hernández-Roldán JL, Múrria C, Romo H, Talavera G, Zakharov E, Hebert PDN, Vila R (2011) Tracing the origin of disjunct distributions: a case of biogeographical convergence in Pyrgus butterflies. Journal of Biogeography 38: 2006-2020

Hibert F, Sabatier D, Andrivot J, Scotti-Saintagne C, Gonzalez S, Prevost MF, Grenand P, Chave J, Caron H, Richard-Hansen C (2011) Botany, Genetics and Ethnobotany: A Crossed Investigation on the Elusive Tapir’s Diet in French Guiana. PLoS ONE 6

Hirakawa Y, Howe A, James ER, Keeling PJ (2011) Morphological Diversity between Culture Strains of a Chlorarachniophyte, Lotharella globosa. PLoS ONE 6: e23193

Hollingsworth PM, Graham SW, Little DP (2011) Choosing and using a plant DNA barcode. PLoS ONE 6: e19254

Hou L, Phillips C, Azaro M, Brzustowicz LM, Bartlett CW (2011) Validation of a cost-efficient multi-purpose SNP panel for disease based research. PLoS ONE 6: e19699

Hrcek J, Miller SE, Quicke DLJ, Smith MA (2011) Molecular detection of trophic links in a complex insect host–parasitoid food web. Molecular Ecology Resources 11: 786-794

Huang DW, Cheng LN (2011) The flightless marine midge Pontomyia (Diptera: Chironomidae): ecology, distribution, and molecular phylogeny. Zoological Journal of the Linnean Society 162: 443-456

Huang L, Tang S, Li J, Zhao J (2011) [Research strategy on molecular identification of animal medical material]. Zhongguo Zhong Yao Za Zhi 36: 234-236

Huemer P (2011) Pseudo-endemism and cryptic diversity in Lepidoptera – case studies from the Alps and the Abruzzi. eco.mont 3: 11-18

Huemer P, Hebert PDN (2011) Cryptic diversity and phylogeography of high alpine Sattleria- a case study combining DNA barcodes and morphology (Lepidoptera: Gelechiidae). Zootaxa 2981


Jackson MD, Marshall SA, Hanner R, Norrbom AL (2011) The fruit flies (Tephritidae) of Ontario. Canadian Journal of Arthropod Identification 15

Janzen DH, Hallwachs W (2011) Joining Inventory by Parataxonomists with DNA Barcoding of a Large Complex Tropical Conserved Wildland in Northwestern Costa Rica. PLoS ONE 6: e18123

Janzen DH, Hallwachs W, Burns JM, Hajibabaei M, Bertrand C, Hebert PDN (2011) Reading the Complex Skipper Butterfly Fauna of One Tropical Place. PLoS ONE 6: e19874

Jeanson ML, Labat J-N, Little DP (2011) DNA barcoding: a new tool for palm taxonomists? Annals of Botany 108: 1445-1451

Jeffery NW, Elias-Gutierrez M, Adamowicz SJ (2011) Species Diversity and Phylogeographical Affinities of the Branchiopoda (Crustacea) of Churchill, Manitoba, Canada. PLoS ONE 6: e18364

Jinbo U, Kato T, Ito M (2011) Current progress in DNA barcoding and future implications for entomology. Entomological Science 14: 107-124

Johnston AR, Morikawa MK, Ntie S, Anthony NM (2011) Evaluating DNA barcoding criteria using African duiker antelope (Cephalophinae) as a test case. Conservation Genetics 12: 1173-1182

Jones FA, Erickson DL, Bernal MA, Bermingham E, Kress WJ, Herre EA, Muller-Landau HC, Turner BL (2011) The Roots of Diversity: Below Ground Species Richness and Rooting Distributions in a Tropical Forest Revealed by DNA Barcodes and Inverse Modeling. PLoS ONE 6: e24506

Jones M, Ghoorah A, Blaxter M (2011) jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units. PLoS ONE 6: e19259

Jørgensen T, Kjaer KH, Haile J, Rasmussen M, Boessenkool S, Andersen K, Coissac E, Taberlet P, Brochmann C, Oralndo L, Gilbert MTP, Willerslev E (2011) Islands in the ice: detecting past vegetation on Greenlandic nunataks using historical records and sedimentary ancient DNA Meta-barcoding. Molecular Ecology: no

Jung S, Duwal RK, Lee S (2011) COI barcoding of true bugs (Insecta, Heteroptera). Molecular Ecology Resources 11: 266-270

Jung S, Kerzhner IM, Lee S (2011) Species of the genus Eurydema (Hemiptera: Heteroptera: Pentatomidae) in Far East Asia: An integrated approach using morphological, molecular, and data crossing analyses for taxonomy. Zootaxa: 48-58


Kamaruzzaman BY, Akbar John B, Zaleha K, Jalal KCA (2011) Molecular Phylogeny of Horseshoe Crab. Asian Journal of Biotechnology

Kamitani S (2011) DNA Barcodes of Japanese Leafhoppers. Esakia 50

Kaneko N, Kubodera T, Iguchi A (2011) Taxonomic Study of Shallow-Water Octopuses (Cephalopoda: Octopodidae) in Japan and Adjacent Waters Using Mitochondrial Genes with Perspectives on Octopus DNA Barcoding. Malacologia 54: 97-108

Karanovic T, Cooper SJB (2011) Molecular and morphological evidence for short range endemism in the Kinnecaris solitaria complex (Copepoda: Parastenocarididae), with descriptions of seven new species. Zootaxa: 1-64

Kartavtsev YP (2011) Divergence at Cyt-b and Co-1 mtDNA genes on different taxonomic levels and genetics of speciation in animals. Mitochondrial DNA 22: 55-65

Kartavtsev YP (2011) Sequence divergence at mitochondrial genes in animals: Applicability of DNA data in genetics of speciation and molecular phylogenetics. Marine Genomics 4: 71-81

Kelly LJ, Hollingsworth PM, Coppins BJ, Ellis CJ, Harrold P, Tosh J, Yahr R (2011) DNA barcoding of lichenized fungi demonstrates high identification success in a floristic context. New Phytol 191: 288-300

Kerr KC (2011) Searching for evidence of selection in avian DNA barcodes. Mol Ecol Resour 11: 1045-1055

Kerr KCR (2011) Exploring the efficacy, utility, and limitations of DNA barcoding within the class Aves. Doctoral Thesis. Integrative Biology, Guelph

Kesanakurti PR, Fazekas AJ, Burgess KS, Percy DM, Newmaster SG, Graham SW, Barrett SCH, Hajibabaei M, Husband BC (2011) Spatial patterns of plant diversity below-ground as revealed by DNA barcoding. Molecular Ecology 20: 1289-1302

Keskin E, Atar HH (2011) DNA barcoding approach in diversification of species from genus Loligo. Current Opinion in Biotechnology 22: S52-S52

Khan SA, Lyla PS, John BA, Kuamr CP, Murugan S, Jalal KCA (2011) DNA Barcoding of Stolephorus indicus, Stolephorus commersonnii and Terapon jarbua of Parangipettai Coastal Waters. Biotechnology 9

Khrisanfova GG, Lopatkin AA, Shestak AG, Mishchenkov VA, Zhukova TV, Akimova LN, Semenova SK (2011) [Polymorphism of the coxl mtDNA gene from cercarian isolates of the avian schistosome Bilharziella polonica (Trematoda: Schistosomatidae) from Belarussian lakes]. Genetika 47: 684-690

Kim S, Koo H, Kim JH, Jung JW, Hwang SY, Kim W (2011) DNA chip for species identification of Korean freshwater fish: A case study. Biochip Journal 5: 72-77

Korotkova N, Borsch T, Quandt D, Taylor NP, Muller KF, Barthlott W (2011) What Does It Take to Resolve Relationships and to Identify Species with Molecular Markers? An Example from the Epiphytic Rhipsalideae (Cactaceae). American Journal of Botany 98: 1549-1572

Kowalczyk R, Taberlet P, Coissac E, Valentini A, Miquel C, Kaminski T, Wojcik JM (2011) Influence of management practices on large herbivore diet-Case of European bison in Bialowieza Primeval Forest (Poland). Forest Ecology and Management 261: 821-828

Kritpetcharat O, Khemtonglang N, Kritpetcharat P, Daduang J, Daduang S, Suwanrungruang K, Bletter N, Sudmoon R, Chaveerach A (2011) Using DNA markers and barcoding to solve the common problem of identifying dried medicinal plants with the examples of Smilax and Cissus in Thailand. Journal of Medicinal Plants Research 5: 3480-3487

Krueger A, Strueven L, Post RJ, Faulde M (2011) The sandflies (Diptera: Psychodidae, Phlebotominae) in military camps in northern Afghanistan (2007-2009), as identified by morphology and DNA ‘barcoding’. Ann Trop Med Parasitol 105: 163-176

Krueger M, Walker C, Schussler A (2011) Acaulospora brasiliensis comb. nov. and Acaulospora alpina (Glomeromycota) from upland Scotland: morphology, molecular phylogeny and DNA-based detection in roots. Mycorrhiza 21: 577-587

Kuang DY, Wu H, Wang YL, Gao LM, Zhang SZ, Lu L (2011) Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics. Genome 54: 663-673

Kumar S, Kahlon T, Chaudhary S (2011) A Rapid Screening for Adulterants in Olive Oil using DNA Barcodes. Food Chemistry In Press, Accepted Manuscript

Kuo LY, Li FW, Chiou WL, Wang CN (2011) First insights into fern matK phylogeny. Molecular Phylogenetics and Evolution 59: 556-566

Laboudi M, Faraj C, Sadak A, Harrat Z, Boubidi SC, Harbach RE, El Aouad R, Linton Y-M (2011) DNA barcodes confirm the presence of a single member of the Anopheles maculipennis group in Morocco and Algeria: An. sicaulti is conspecific with An. labranchiae. Acta Tropica 118


Lai Y-T, Nakano T, Chen J-H (2011) Three species of land leeches from Taiwan, Haemadipsa rjukjuana comb. n., a new record for Haemadipsa picta Moore, and an updated description of Tritetrabdella taiwana (Oka). Zookeys 139

Lakra WS, Verma MS, Goswamii M, Lal KK, Mohindra V, Punia P, Gopalakrishnan A, Singh KV, Ward RD, Hebert PDN (2011) DNA barcoding Indian marine fishes. Molecular Ecology Resources 11: 60-71

Lecroq B, Lejzerowicz F, Bachar D, Christen R, Esling P, Baerlocher L, Osteras M, Farinelli L, Pawlowski J (2011) Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments. Proceedings of the National Academy of Sciences of the United States of America 108: 13177-13182

Lee DH, Park JK, Youn HN, Lee YN, Lim TH, Kim MS, Lee JB, Park SY, Choi IS, Song CS (2011) Surveillance and Isolation of HPAI H5N1 from Wild Mandarin Ducks (Aix galericulata). Journal of Wildlife Diseases 47: 994-998

Lee G, Park SY, Hwang J, Lee YH, Hwang SY, Lee S, Lee TK (2011) Development of DNA chip for jellyfish verification from South Korea. Biochip Journal 5: 375-382

Lee H-J, Kwan Y-S, Kong S-R, Min BS, Seo JE, Won Y-J (2011) DNA barcode examination of Bryozoa (class: Gymnolaemata) in Korean seawater. Korean Journal of Systematic Zoology 27

Lee S-R, Oak JH, Keum Y-S, Lee JA, Chung IK (2011) Utility of rbcS gene as a novel target DNA region for brown algal molecular systematics. Phycological Research 59: 34-41

Lee W, Hyojoong K, Jongok L, Hwal-Ran C, Yeyeun K, Yang-Su K, Jeong-Yeon J, Foottit RG, Seunghwan L (2011) Barcoding aphids (Hemiptera: Aphididae) of the Korean Peninsula: updating the global data set. Molecular Ecology Resources 11: 32-37

Lefort M-C, Boyer S, Worner SP, Armstrong K (2011) Noninvasive molecular methods to identify live scarab larvae: an example of sympatric pest and nonpest species in New Zealand. Molecular Ecology Resources: no

Leon-Regagnon V (2011) Evidence of new species of Haematoloechus (Platyhelminthes: Digenea) using partial cox1 sequences. Mitochondrial DNA 21: 12-17

Li DZ, Liu JQ, Chen ZD, Wang H, Ge XJ, Zhou SL, Gao LM, Fu CX, Chen SL (2011) Plant DNA barcoding in China. Journal of Systematics and Evolution 49: 165-168

Li FW, Kuo LY, Rothfels CJ, Ebihara A, Chiou WL, Windham MD, Pryer KM (2011) rbcL and matK Earn Two Thumbs Up as the Core DNA Barcode for Ferns. PLoS ONE 6: e26597

Li M, Cao H, But PPH, Shaw PC (2011) Identification of herbal medicinal materials using DNA barcodes. Journal of Systematics and Evolution 49: 271-283

Li QQ, Li DY, Ye H, Liu XF, Shi W, Cao N, Duan YQ (2011) Using COI gene sequence to barcode two morphologically alike species: the cotton bollworm and the oriental tobacco budworm (Lepidoptera: Noctuidae). Molecular Biology Reports 38: 5107-5113

Li Y, Gao LM, Poudel RC, Li DZ, Forrest A (2011) High universality of matK primers for barcoding gymnosperms. Journal of Systematics and Evolution 49: 169-175

Li Y, Zhao X, Pan Z, Xie Z, Liu H, Xu Y, Li Q (2011) The origin of the Tibetan Mastiff and species identification of Canis based on mitochondrial cytochrome c oxidase subunit I (COI) gene and COI barcoding. Animal 5: 1868-1873

Liao YC, Cheng TY, Shao KT (2011) Parapercis lutevittata, a new cryptic species of Parapercis (Teleostei: Pinguipedidae), from the western Pacific based on morphological evidence and DNA barcoding. Zootaxa: 32-42

Lijtmaer DA, Kerr KC, Barreira AS, Hebert PDN, Tubaro PL (2011) DNA barcode libraries provide insight into continental patterns of avian diversification. PLoS ONE 6: e20744

Lim GS, Balke M, Meier R (2011) Determining Species Boundaries in a World Full of Rarity: Singletons, Species Delimitation Methods. Systematic Biology

Little DP (2011) DNA Barcode Sequence Identification Incorporating Taxonomic Hierarchy and within Taxon Variability. PLoS ONE 6: e20552

Liu J, Li Q, Kong L, Zheng X (2011) Cryptic diversity in the pen shell Atrina pectinata (Bivalvia: Pinnidae): high divergence and hybridization revealed by molecular and morphological data. Molecular Ecology 20: 4332-4345

Liu J, Li Q, Kong LF, Yu H, Zheng XD (2011) Identifying the true oysters (Bivalvia: Ostreidae) with mitochondrial phylogeny and distance-based DNA barcoding. Molecular Ecology Resources 11: 820-830

Liu J, Moeller M, Gao L-M, Zhang D-Q, Li D-Z (2011) DNA barcoding for the discrimination of Eurasian yews (Taxus L., Taxaceae) and the discovery of cryptic species. Molecular Ecology Resources 11: 89-100

Liu Y, Cao T, Ge XJ (2011) A case study of DNA barcoding in Chinese Grimmiaceae and a moss recorded in China for the first time. Taxon 60: 185-193

Lörz AN, Smith PJ, Linse K, Steinke D (2011) High genetic diversity within Epimeria georgiana (Amphipoda) from the southern Scotia Arc. Marine Biodiversity accepted

Lotters S, Van der Meijden A, Coloma LA, Boistel R, Cloetens P, Ernst R, Lehr E, Veith M (2011) Assessing the molecular phylogeny of a near extinct group of vertebrates: the Neotropical harlequin frogs (Bufonidae; Atelopus). Systematics and Biodiversity 9: 47-59

Lowe AJ, Cross HB (2011) The Application of DNA Methods to Timber Tracking and Origin Verification. Iawa Journal 32: 251-262

Lowenstein JH, Osmundson TW, Becker S, Hanner R, Stiassny MLJ (2011) Incorporating DNA barcodes into a multi-year inventory of the fishes of the hyperdiverse Lower Congo River, with a multi-gene performance assessment of the genus Labeo as a case study. Mitochondrial DNA 22 (S1): 52-70

Luchetti EA, Iglesias SP, Sellos DY (2011) Chimaera opalescens n. sp., a new chimaeroid (Chondrichthyes: Holocephali) from the north-eastern Atlantic Ocean. J Fish Biol 79: 399-417

Luczon AU, Mohammad Isa AHM, Quilang JP, Ong PS, Fontanilla IKC (2011) DNA barcoding of the white-collared kingfisher Todiramphus chloris (Boddaert 1783) (Alcedinidae) using the mitochondrial cytochrome c oxidase subunit I gene. Philippine Science Letters 3

Lumbsch HT, Leavitt SD (2011) Goodbye morphology? A paradigm shift in the delimitation of species in lichenized fungi. Fungal Diversity 50: 59-72

Luo A, Zhang A, Ho S, Xu W, Zhang Y, Shi W, Cameron S, Zhu C (2011) Potential efficacy of mitochondrial genes for animal DNA barcoding: a case study using eutherian mammals. BMC Genomics 12: 84


Mabragana E, Diaz de Astarloa JM, Hanner R, Zhang J, Gonzalez Castro M (2011) DNA barcoding identifies argentine fishes from marine and brackish waters. PLoS ONE 6: e28655

MacGillivary ML, Kaczmarska I (2011) Survey of the Efficacy of a Short Fragment of the rbcL Gene as a Supplemental DNA Barcode for Diatoms. J Eukaryot Microbiol 58: 529-536

Mammella MA, Cacciola SO, Martin F, Schena L (2011) Genetic characterization of Phytophthora nicotianae by the analysis of polymorphic regions of the mitochondrial DNA. Fungal Biol 115: 432-442

Margam VM, Coates BS, Ba MN, Sun WL, Binso-Dabire CL, Baoua I, Ishiyaku MF, Shukle JT, Hellmich RL, Covas FG, Ramasamy S, Armstrong J, Pittendrigh BR, Murdock LL (2011) Geographic distribution of phylogenetically-distinct legume pod borer, Maruca vitrata (Lepidoptera: Pyraloidea: Crambidae). Molecular Biology Reports 38: 893-903

Marshall DC, Hill KBR, Cooley JR, Simon C (2011) Hybridization, Mitochondrial DNA Phylogeography, and Prediction of the Early Stages of Reproductive Isolation: Lessons from New Zealand Cicadas (Genus Kikihia). Systematic Biology 60: 482-502

Martinez-Salazar EA, Leon-Regagnon V (2011) Molecular evidence that Langeronia macrocirra and Langeronia cf. parva (Trematoda: Pleurogenidae) parasites of anurans from Mexico are conspecific. Mitochondrial DNA 21: 3-11

Matarese AC, Spies IB, Busby MS, Orr JW (2011) Early larvae of Zesticelus profundorum (family Cottidae) identified using DNA barcoding. Ichthyological Research 58: 170-174

Mati E, de Boer H (2011) Ethnobotany and trade of medicinal plants in the Qaysari Market, Kurdish Autonomous Region, Iraq. Journal of Ethnopharmacology 133: 490-510

Maturana CS, Moreno RA, Labra FA, Gonzalez-Wevar CA, Rozbaczylo N, Carrasco FD, Poulin E (2011) DNA barcoding of marine polychaetes species of southern Patagonian fjords. Revista De Biologia Marina Y Oceanografia 46: 35-42

Matzen da Silva J, Creer S, dos Santos A, Costa AC, Cunha MR, Costa FO, Carvalho GR (2011) Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca). PLoS ONE 6: e19449

McFadden CS, Benayahu Y, Pante E, Thoma JN, Nevarez PA, France SC (2011) Limitations of mitochondrial gene barcoding in Octocorallia. Molecular Ecology Resources 11: 19-31

McGowin AE, Truong TM, Corbett AM, Bagley DA, Ehrhart LM, Bresette MJ, Weege ST, Clark D (2011) Genetic barcoding of marine leeches (Ozobranchus spp.) from Florida sea turtles and their divergence in host specificity. Molecular Ecology Resources 11: 271-278

Mecklenburg CW, Møller PR, Steinke D (2011) Biodiversity of Arctic Marine Fishes: Taxonomy and Zoogeography. Marine Biodiversity 41: 109-140

Meiklejohn KA, Wallman JF, Dowton M (2011) DNA-based identification of forensically important Australian Sarcophagidae (Diptera). International Journal of Legal Medicine 125: 27-32

Millar CD, Waugh J, Lambert DM (2011) Are BOLD searches scientific? A response to Federhen (2011). Molecular Ecology Resources 11: 939-940

Miller D, Jessel A, Mariani S (2011) Seafood mislabelling: comparisons of two western European case studies assist in defining influencing factors, mechanisms and motives. Fish and Fisheries early online

Minamiya Y, Ohga K, Hayakawa H, Ito K, Fukuda T (2011) Coelomic fluid: a noninvasive source of DNA in earthworms. Molecular Ecology Resources: no

Mincks Hardy S, Carr CM, Hardman M, Steinke D, Corstorphine E, Mah C (2011) Biodiversity and phylogeography of Arctic marine fauna: insights from molecular tools. Marine Biodiversity 41: 195-210

Mitchell A (2011) DNA barcoding is useful for taxonomy: a reply to Ebach. Zootaxa: 67-68

Moftah M, Abdel Aziz SH, El Ramah S, Favereaux A (2011) Classification of Sharks in the Egyptian Mediterranean Waters Using Morphological and DNA Barcoding Approaches. PLoS ONE 6: e27001

Mohd-Shamsudin MI, Fard MZ, Mather PB, Suleiman Z, Hassan R, Othman RY, Bhassu S (2011) Molecular characterization of relatedness among colour variants of Asian Arowana (Scleropages formosus). Gene 490: 47-53

Montero-Pau J, Ramos-Rodriguez E, Serra M, Gomez A (2011) Long-Term Coexistence of Rotifer Cryptic Species. PLoS ONE 6

Moore ABM, White WT, Ward RD, Naylor GJP, Peirce R (2011) Rediscovery and redescription of the smoothtooth blacktip shark, Carcharhinus leiodon (Carcharhinidae), from Kuwait, with notes on its possible conservation status. Marine and Freshwater Research 62: 528-539

Mousseau T, Sikes DS (2011) Almost but not quite a subspecies: a case of genetic but not morphological diagnosability in Nicrophorus (Coleoptera: Silphidae). Biological Journal of the Linnean Society 102: 311-333

Muellner AN, Schaefer H, Lahaye R (2011) Evaluation of candidate DNA barcoding loci for economically important timber species of the mahogany family (Meliaceae). Molecular Ecology Resources 11: 450-460


Nagoshi RN, Brambila J, Meagher RL (2011) Use of DNA barcodes to identify invasive armyworm Spodoptera species in Florida. Journal of Insect Science 11: 154-154

Nagy ZT, Breman FC, Dall’Asta U (2011) DNA barcoding of museum specimens of Lymantriidae preserved in the Royal Museum for Central Africa. Entomologica Romanica 15

Nam YD, Jung MJ, Roh SW, Kim MS, Bae JW (2011) Comparative analysis of Korean human gut microbiota by barcoded pyrosequencing. PLoS ONE 6: e22109

Naro-Maciel E, Reid B, Holmes KE, Brumbaugh DR, Martin M, DeSalle R (2011) Mitochondrial DNA sequence variation in spiny lobsters: population expansion, panmixia, and divergence. Marine Biology 158: 2027-2041

Nayaka SC, Wulff EG, Udayashankar AC, Nandini BP, Niranjana SR, Mortensen CN, Prakash HS (2011) Prospects of molecular markers in Fusarium species diversity. Applied Microbiology and Biotechnology 90: 1625-1639

Nazari V, Larson TB, Lees DC, Brattström O, Bouyer T, Van de Poel G, Hebert PDN (2011) Phylogenetic systematics of Colotis and associated genera (Lepidoptera: Pieridae): evolutionary and taxonomic implications. Journal of Zoological Systematics and Evolutionary Research 49: 204-215

Nesi N, Nakoune E, Cruaud C, Hassanin A (2011) DNA barcoding of African fruit bats (Mammalia, Pteropodidae). The mitochondrial genome does not provide a reliable discrimination between Epomophorus gambianus and Micropteropus pusillus. Comptes Rendus Biologies 334: 544-554

Nicolalde-Morejon F, Gonzalez-Astorga J, Vergara-Silva F, Vovides AP (2011) Systematic perspectives on Zamia (Zamiaceae) in Megamexico: from alpha taxonomy to genetic barcodes. Revista Mexicana De Biodiversidad 82: 341-355

Nicolalde-Morejon F, Vergara-Silva F, Gonzalez-Astorga J, Stevenson DW (2011) Character-based, population-level DNA barcoding in Mexican species of Zamia L. (Zamiaceae: Cycadales). Mitochondrial DNA 21: 51-59

Nicolalde-Morejón F, Vergara-Silva F, González-Astorga J, Stevenson DW, Vovides AP, Sosa V (2011) A character-based approach in the Mexican cycads supports diverse multigene combinations for DNA barcoding. Cladistics 27: 150-164

Nicole S, Barcaccia G, Erickson DL, Salmaso M, Kress WJ, Lucchin M (2011) DNA barcoding and its potentials for the genetic identification of grapevine cultivars. Journal of Biotechnology 150: S111-S111

Nicole S, Erickson DL, Ambrosi D, Bellucci E, Lucchin M, Papa R, Kress WJ, Barcaccia G (2011) Biodiversity studies in Phaseolus species by DNA barcoding. Genome 54: 529-545

Nilsson RH, Veldre V, Wang Z, Eckart M, Branco S, Hartmann M, Quince C, Godhe A, Bertrand Y, Alfredsson JF, Larsson KH, Koljalg U, Abarenkov K (2011) A note on the incidence of reverse complementary fungal ITS sequences in the public sequence databases and a software tool for their detection and reorientation. Mycoscience 52: 278-282

Nimbalkar MS, Kshirsagar PR, Shimpale VB, Pawar NV, Dixit GB (2011) DNA barcoding for identification of the enigmatic plant Ramkand. Current Science 100: 1277-1277

Nock CJ, Waters DLE, Edwards MA, Bowen SG, Rice N, Cordeiro GM, Henry RJ (2011) Chloroplast genome sequences from total DNA for plant identification. Plant Biotechnology Journal 9: 328-333

Nwani CD, Becker S, Braid HE, Ude EF, Okogwo OI, Hanner R (2011) DNA barcoding discriminates freshwater fishes from southeastern Nigeria and provides river system-level phylogeographic resolution within some species. Mitochondrial DNA 22 (S1): 43-51


Oceguera-Figueroa A, Leon-Regagnon V, Siddall ME (2011) DNA barcoding reveals Mexican diversity within the freshwater leech genus Helobdella (Annelida: Glossiphoniidae). Mitochondrial DNA 21: 24-29

Oehm J, Juen A, Nagiller K, Neuhauser S, Traugott M (2011) Molecular scatology: how to improve prey DNA detection success in avian faeces? Molecular Ecology Resources

Ogedengbe JD, Hanner RH, Barta JR (2011) DNA barcoding identifies Eimeria species and contributes to the phylogenetics of coccidian parasites (Eimeriorina, Apicomplexa, Alveolata). International Journal for Parasitology 41: 843-850

Okassa M, Kreiter S, Guichou S, Tixier MS (2011) Molecular and morphological boundaries of the predatory mite Neoseiulus californicus (McGregor) (Acari: Phytoseiidae). Biological Journal of the Linnean Society 104: 393-406

O’Loughlin PM, Paulay G, Davey N, Michonneau F (2011) The Antarctic region as a marine biodiversity hotspot for echinoderms: Diversity and diversification of sea cucumbers. Deep Sea Research Part II: Topical Studies in Oceanography 58: 264-275

Ong PS, Luczon AU, Quilang JP, Sumaya AMT, Ibanez JC, Salvador DJ, Fontanilla IKC (2011) DNA barcodes of Philippine accipitrids. Molecular Ecology Resources 11: 245-254

Pacheco MA, Battistuzzi FU, Lentino M, Aguilar RF, Kumar S, Escalante AA (2011) Evolution of Modern Birds Revealed by Mitogenomics: Timing the Radiation and Origin of Major Orders. Molecular Biology and Evolution 28: 1927-1942

Palacios-Vargas JG, Deharveng L, D’Haese CA (2011) The genus Pronura (Collembola: Neanuridae) in South America, with descriptions of two new species and a barcode sequence for one of them. Revue Suisse De Zoologie 118: 197-205

Palero F, Guerao G, Clark PF, Abello P (2011) Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description. Journal of the Marine Biological Association of the United Kingdom 91: 485-492

Pang XH, Song JY, Zhu YJ, Xu HX, Huang LF, Chen SL (2011) Applying plant DNA barcodes for Rosaceae species identification. Cladistics 27: 165-170

Pappalardo AM, Guarino F, Messina A, De Pinto V (2011) Swordfish COI-DNA barcoding as a suitable tool for species and stock identification. Febs Journal 278: 440-440

Pappalardo AM, Guarino F, Reina S, Messina A, De Pinto V (2011) Geographically widespread swordfish barcode stock identification: a case study of its application. PLoS ONE 6: e25516

Park DS, Suh SJ, Hebert PDN, Oh HW, Hong KJ (2011) DNA barcodes for two scale insect families, mealybugs (Hemiptera: Pseudococcidae) and armored scales (Hemiptera: Diaspididae). Bulletin of Entomological Research 101

Park D-S, Foottit R, Maw E, Hebert PDN (2011) Barcoding Bugs: DNA-Based Identification of the True Bugs (Insecta: Hemiptera: Heteroptera). PLoS ONE 6: e18749

Park HY, Yoo HS, Jung G, Kim CB (2011) New DNA barcodes for identification of Korean birds. Genes & Genomics 33: 91-95

Parveen I, Singh HK, Raghuvanshi S, Pradhan UC, Babbar SB (2011) DNA barcoding of endangered Indian Paphiopedilum species. Molecular Ecology Resources: no

Paukstadt LH, Paukstadt U, Schulz H (2011) The life-history of Antheraea (Antheraea) jana (Stoll in Cramer, 1782) from eastern Java, Indonesia (Lepidoptera: Saturniidae). Beitraege zur Kenntnis der Wilden Seidenspinner 9

Paukstadt U, Paukstad LH (2011) The life-history of Actias parasinensis Brechlin, 2009 from northern Vietnam (Lepidoptera: Saturniidae). Beitraege zur Kenntnis der Wilden Seidenspinner 9

Pei N, Lian JY, Erickson DL, Swenson NG, Kress WJ, Ye WH, Ge XJ (2011) Exploring tree-habitat associations in a Chinese subtropical forest plot using a molecular phylogeny generated from DNA barcode loci. PLoS ONE 6: e21273

Pereira LHG, Maia GuMG, Hanner R, Foresti F, Oliveira C (2011) DNA barcodes discriminate freshwater fishes from the Paraiba do Sul River Basin, Sao Paulo, Brazil. Mitochondrial DNA 22 (S1): 71-79

Pereira LHG, Pazian MF, Hanner R, Foresti F, Oliveira C (2011) DNA barcoding reveals hidden diversity in the Neotropical freshwater fish Piabina argentea (Characiformes: Characidae) from the Upper Paraná Basin of Brazil. Mitochondrial DNA 22 (S1): 87-96

Piganeau G, Eyre-Walker A, Grimsley N, Moreau H (2011) How and Why DNA Barcodes Underestimate the Diversity of Microbial Eukaryotes. PLoS ONE 6: e16342

Pilgrim EM, Jackson SA, Swenson S, Turcsanyi I, Friedman E, Weigt L, Bagley MJ (2011) Incorporation of DNA barcoding into a large-scale biomonitoring program: opportunities and pitfalls. Journal of the North American Benthological Society 30: 217-231

Piredda R, Simeone MC, Attimonelli M, Bellarosa R, Schirone B (2011) Prospects of barcoding the Italian wild dendroflora: oaks reveal severe limitations to tracking species identity. Molecular Ecology Resources 11: 72-83

Plaisance L, Caley MJ, Brainard RE, Knowlton N (2011) The Diversity of Coral Reefs: What Are We Missing? PLoS ONE 6: e25026 EP –

Polyakova N (2011) Barcoding and phylogenetic inferences in nine mugilid species (Pisces, Mugiliformes) Proceedings of the International Conference. Marine Biodiversity of East Asian Seas: Status, Challenges and Sustainable Development, Nha Trang, Vietnam, December 6-7, 2010. Asia-Pacific Network for Global Change Research Institute of Oceanography & A.V. Zhirmunsky Institute of Marine Biology

Pompanon F, Deagle BE, Symondson WOC, Brown DS, Jarman SN, Taberlet P (2011) Who is eating what: diet assessment using next generation sequencing. Molecular Ecology: no

Prado BR, Pozo C, Valdez-Moreno M, Hebert PDN (2011) Beyond the Colours: Discovering Hidden Diversity in the Nymphalidae of the Yucatan Peninsula in Mexico through DNA Barcoding. PLoS ONE 6: e27776 EP –

Pramual P, Wongpakam K, Adler PH (2011) Cryptic biodiversity and phylogenetic relationships revealed by DNA barcoding of Oriental black flies in the subgenus Gomphostilbia (Diptera: Simuliidae). Genome 54: 1-9

Prous M, Heidemaa M, Soon V (2011) Empria longicornis species group: taxonomic revision with notes on phylogeny and ecology (Hymenoptera, Tenthredinidae). Zootaxa 2756

Puillandre N, Lambert A, Brouillet S, Achaz G (2011) ABGD, Automatic Barcode Gap Discovery for primary species delimitation. Mol Ecol

Quan X, Zhou SL (2011) Molecular identification of species in Prunus sect. Persica (Rosaceae), with emphasis on evaluation of candidate barcodes for plants. Journal of Systematics and Evolution 49: 138-145

Quilang JP, Santos BS, Ong PS, Basiao ZU, Fontanilla IKC, Cao EP (2011) DNA Barcoding of the Philippine Endemic Freshwater Sardine Sardinella tawilis (Clupeiformes: Clupeidae) and Its Marine Relatives. Philippine Agricultural Scientist 94: 248-257


Ramadan HAI (2011) Sequence of specific mitochondrial 16S rRNA gene fragment from Egyptian buffalo is used as a pattern for discrimination between river buffaloes, cattle, sheep and goats. Molecular Biology Reports 38: 3929-3934

Randrianiaina RD, Strauss A, Glos J, Glaw F, Vences M (2011) Diversity, external morphology and ‘reverse taxonomy’ in the specialized tadpoles of Malagasy river bank frogs of the subgenus Ochthomantis (genus Mantidactylus). Contributions to Zoology 80: 17-65

Randrianiaina RD, Wollenberg KC, Hiobiarilanto TR, Strauss A, Glos J, Vences M (2011) Nidicolous tadpoles rather than direct development in Malagasy frogs of the genus Gephyromantis. Journal of Natural History 45: 2871-2900

Rasmussen-Hellberg RS, Morrissey MT, Hanner RH (2011) A multiplex PCR method for the identification of commercially important salmon and trout species (Oncorhynchus and Salmo) in North America. J Food Sci 75: C595-606

Rasmussen-Hellberg RS, Naaum AM, Handy SM, Hanner RH, Deeds JR, Yancy HF, Morrissey MT (2011) Interlaboratory evaluation of a real-time multiplex polymerase chain reaction method for identification of salmon and trout species in commercial products. J Agric Food Chem 59: 876-884

Ratnasingham S, Hebert PDN (2011) BOLD’s role in barcode data management and analysis: a response. Molecular Ecology Resources 11: 941-942

Razgour O, Clare EL, Zeale MRK, Hanmer J, Schnell IB, Rasmussen M, Gilbert TP, Jones G (2011) High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species. Ecology and Evolution Early Online

Rehan SM, Sheffield CS (2011) Morphological and molecular delineation of a new species in the Ceratina dupla species-group (Hymenoptera: Apidae: Xylocopinae) of eastern North America. Zootaxa: 35-50

Reid BN, Le M, McCord WP, Iverson B, Georges A, Bergmann T, Amato G, DeSalle R, Naro-Maciel E (2011) Comparing and combining distance-based and character-based approaches for barcoding turtles. Molecular Ecology Resources 11: 956-967

Ren H, Lu L, Wang H, Li DZ (2011) DNA barcoding of Gaultheria L. in China (Ericaceae: Vaccinioideae). Journal of Systematics and Evolution 49: 411-424

Rintoul TL, Eggertson QA, Levesque CA (2011) Multigene phylogenetic analyses to delimit new species in fungal plant pathogens. Methods Mol Biol 835: 549-569

Robideau GP, de Cock AW, Coffey MD, Voglmayr H, Brouwer H, Bala K, Chitty DW, Desaulniers N, Eggertson QA, Gachon CMM, Hu CH, Kuepper FC, Rintoul TL, Sarhan E, Verstappen ECP, Zhang Y, Bonanta PJM, Ristaino JB, Levesque CA (2011) DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Molecular Ecology Resources 11: 1002-1011

Rodriguez-Fernandez JI, De Carvalho CJB, Pasquini C, De Lima KMG, Moura MO, Arizaga GGC (2011) Barcoding without DNA? Species identification using near infrared spectroscopy. Zootaxa: 46-54

Romero P, Ramirez R (2011) Divergencia intraespecifica y codigo de barras de ADN en Systrophia helicycloides (Gastropoda, Scolodontidae). Revista Peruana de Biologia 18(2): 201-208.

Rosen GL, Polikar R, Caseiro DA, Essinger SD, Sokhansanj BA (2011) Discovering the unknown: improving detection of novel species and genera from short reads. J Biomed Biotechnol 2011: 495849

Rougiere R (2011) ADN barcoding of Lepidoptera. Part 1: a tool for identification of species. Oreina 15

Ruangsittichai J, Apiwathnasorn C, Dujardin JP (2011) Interspecific and sexual shape variation in the filariasis vectors Mansonia dives and Ma. bonneae. Infect Genet Evol


Saldarriaga JF, Gile GH, James ER, Horak A, Scheffrahn RH, Keeling PJ (2011) Morphology and Molecular Phylogeny of Pseudotrichonympha hertwigi and Pseudotrichonympha paulistana (Trichonymphea, Parabasalia) from Neotropical Rhinotermitids. Journal of Eukaryotic Microbiology 58: 487-496

Salokannnel J, Rantala MJ, Wahlberg N (2011) DNA-barcoding clarifies species definitions of Finnish Apatania (Trichoptera: Apataniidae). Entomologica Fennica 21: 1-11

Sano M, Havill NP, Ozaki K (2011) Taxonomic identity of a galling adelgid (Hemiptera: Adelgidae) from three spruce species in Central Japan. Entomological Science 14: 94-99

Santos AMC, Besnard G, Quicke DLJ (2011) Applying DNA barcoding for the study of geographical variation in host-parasitoid interactions. Molecular Ecology Resources 11: 46-59

Santos BS, Quilang JP (2011) DNA Barcoding of Arius Species (Siluriformes: Ariidae) in Laguna de Bay, Philippines Using the Cytochrome C Oxidase Subunit I Gene. Philippine Agricultural Scientist 94: 205-210

Sarkar IN, Trizna M (2011) The Barcode of Life Data Portal: Bridging the Biodiversity Informatics Divide for DNA Barcoding. PLoS ONE 6

Sasakawa K, Ikeda H, Sutou M, Dobata S, Ito M (2011) Parasitism of adult Poecilus versicolor (Coleoptera: Carabidae) by hymenopteran larvae. Canadian Entomologist 143

Sauer J, Hausdorf B (2011) A comparison of DNA-based methods for delimiting species in a Cretan land snail radiation reveals shortcomings of exclusively molecular taxonomy. Cladistics

Schaefer H, Carine MA, Rumsey FJ (2011) From European Priority Species to Invasive Weed: Marsilea azorica (Marsileaceae) is a Misidentified Alien. Systematic Botany 36: 845-853

Schilthuizen M, Scholte C, van Wijk REJ, Dommershuijzen J, van der Horst D, Schlochtern MMZ, Lievers R, Groenenberg DSJ (2011) Using DNA-barcoding to make the necrobiont beetle family Cholevidae accessible for forensic entomology. Forensic Science International 210: 91-95 | LINK

Schindel D, Stoeckle M, Milensky C, Trizna M, Schmidt B, Gebhard C, Graves G (2011) Project Description: DNA Barcodes of Bird Species in the National Museum of Natural History, Smithsonian Institution, USA. Zookeys 152: 87-91

Schwentner M, Timms BV, Richter S (2011) An integrative approach to species delineation incorporating different species concepts: a case study of Limnadopsis (Branchiopoda: Spinicaudata). Biological Journal of the Linnean Society 104: 575-599

Segerer AH, Haslberger A, Gruenewald T (2011) Occurrence of Olethreutes subtilana (Falkovitsh, 1959) in Central Europe uncovered by DNA barcoding (Tortricidae: Olethreutinae). Nota Lepidopterologica 33

Seifert KA, Gams W (2011) The genera of Hyphomycetes-2011 update. Persoonia 27: 119-129

Seppa P, Helantera H, Trontti K, Punttila P, Chernenko A, Martin SJ, Sundstrom L (2011) The many ways to delimit species: hairs, genes and surface chemistry. Myrmecological News 15: 31-41

Serra-Pereira B, Moura T, Griffiths AM, Serrano Gordo L, Figueiredo I (2011) Molecular barcoding of skates (Chondrichthyes: Rajidae) from the southern Northeast Atlantic. Zoologica Scripta 40: 76-84

Sharkey M, Clutts S, Tucker E, Janzen D, Hallwachs W, Dapkey T, Smith A (2011) Lytopylus Förster (Hymenoptera, Braconidae, Agathidinae) species from Costa Rica, with an emphasis on specimens reared from caterpillars in Area de Conservación Guanacaste. Zookeys 130: 379-419

Shi LC, Zhang J, Han JP, Song JY, Yao H, Zhu YJ, Li JC, Wang ZZ, Xiao W, Lin YL, Xie CX, Qian ZZ, Chen SL (2011) Testing the potential of proposed DNA barcodes for species identification of Zingiberaceae. Journal of Systematics and Evolution 49: 261-266

Shipunov A, Shipunova E (2011) Haptanthus Story: Rediscovery of Enigmatic Flowering Plant from Honduras. American Journal of Botany 98: 761-763

Shiyang K, Amrita S, Gaurav V, Rudolf M (2011) Is the COI Barcoding Gene Involved in Speciation Through Intergenomic Conflict? Molecular Phylogenetics and Evolution

Shokralla S, Zhou X, Janzen DH, Hallwachs W, Landry JF, Jacobus LM, Hajibabaei M (2011) Pyrosequencing for Mini-Barcoding of Fresh and Old Museum Specimens. PLoS ONE 6: e21252

Shufran KA, Puterka GJ (2011) DNA Barcoding to Identify All Life Stages of Holocyclic Cereal Aphids (Hemiptera: Aphididae) on Wheat and Other Poaceae. Annals of the Entomological Society of America 104: 39-42

Sivaramakrishnan KG, Subramanian KA, Arunachalam M, Selva Kumar C, Sundar S (2011) Emerging trends in molecular systematics and molecular phylogeny of mayflies (Insecta: Ephemeroptera). Journal of Threatened Taxa 3

Skelton PH, Swartz ER (2011) Walking the tightrope: trends in African freshwater systematic ichthyology. Journal of Fish Biology 79: 1413-1435

Smith MA, Eveleigh ES, McCann KS, Merilo MT, McCarthy PC, Van Rooyen KI (2011) Barcoding a Quantified Food Web: Crypsis, Concepts, Ecology and Hypotheses. PLoS ONE 6: e14424

Smith PJ, Steinke D, McMillan PJ, Stewart AL, McVeagh MS, Diaz de Astarloa JM, Welsford D, Ward RD (2011) Corrigendum. Journal of Fish Biology 78: 983-984

Smith PJ, Steinke D, McMillan PJ, Stewart AL, McVeagh SM, Diaz de Astarloa JM, Welsford D, Ward RD (2011) DNA barcoding highlights a cryptic species of grenadier Macrourus in the Southern Ocean. Journal of Fish Biology 78: 355-365

Smith PJ, Steinke D, McMillan PJ, Stewart AL, Ward RD (2011) DNA barcoding of morid cods reveals deep divergence in the antitropical Halargyreus johnsoni but little distinction between Antimora rostrata and Antimora microlepis. Mitochondrial DNA 22 (S1): 21-26

Sourakov A, Zakharov EV (2011) “Darwin’s butterflies”? DNA barcoding and the radiation of the endemic Caribbean butterfly genus Calisto (Lepidoptera, Nymphalidae, Satyrinae). Comparative Cytogenetics 5: 191-210

Sprague J, Zimkus BM (2011) Description of the tadpole of Amietophrynus brauni (Anura: Bufonidae) from the West Usambara Mountains, Tanzania. African Journal of Herpetology 60: 70-77

Srivathsan A, Meier R (2011) On the inappropriate use of Kimura-2-parameter (K2P) divergences in the DNA-barcoding literature. Cladistics

Staudacher K, Pitterl P, Furlan L, Cate PC, Traugott M (2011) PCR-based species identification of Agriotes larvae. Bull Entomol Res 101: 201-210

Stech M, Kolvoort E, Loonen MJJE, Vrieling K, Kruijer JD (2011) Bryophyte DNA sequences from faeces of an arctic herbivore, barnacle goose (Branta leucopsis). Molecular Ecology Resources 11: 404-408

Stech M, Quandt D (2011) 20,000 species and five key markers: The status of molecular bryophyte phylogenetics. Phytotaxa 9: 196-228

Steele PR, Pires JC (2011) Biodiversity Assessment: State-of-the-Art Techniques in Phylogenomics and Species Identification. American Journal of Botany 98: 415-425

Steinke D, Hanner R (2011) The FISH-BOL Collaborators Protocol. Mitochondrial DNA 22 (S1): 10-14

Stevens MI, Porco D, D’Haese CA, Deharveng L (2011) Comment on “Taxonomy and the DNA Barcoding Enterprise” by Ebach (2011). Zootaxa: 85-88

Stoeckle MY, Gamble CC, Kirpekar R, Young G, Ahmed S, Little DP (2011) Commercial Teas Highlight Plant DNA Barcode Identification Successes and Obstacles. Nature Scientific Reports 1: 42

Stur E, Ekrem T (2011) Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding. Zootaxa 2743: 27-39

Stur E, Spies M (2011) Description of Chaetocladius longivirgatus sp. n., with a review of C. suecicus (Kieffer) (Diptera: Chironomidae). Zootaxa 2762: 37-48

Sun Y, Li Q, Kong L, Zheng X (2011) DNA barcoding of Ceanogastropoda along coast of Chine based on the COI gene. Molecular Ecology Resources

Sutou M, Kato T, Ito M (2011) Recent discoveries of armyworms in Japan and their species identification using DNA barcoding. Mol Ecol Resour 11: 992-1001

Sweeney BW, Battle JM, Jackson JK, Dapkey T (2011) Can DNA barcodes of stream macroinvertebrates improve descriptions of community structure and water quality? Journal of the North American Benthological Society 30: 195-216


Tavares ES, Goncalves P, Miyaki CY, Baker AJ (2011) DNA Barcode Detects High Genetic Structure within Neotropical Bird Species. PLoS ONE 6: e28543

Telford A, O’Hare MT, Cavers S, Holmes N (2011) Can genetic bar-coding be used to identify aquatic Ranunculus L. subgenus Batrachium (DC) A. Gray? A test using some species from the British Isles. Aquatic Botany 95: 65-70

Thomsen PF, Kielgast J, Iversen LL, Wiuf C, Rasmussen M, Gilbert MTP, L. O, Willerslev E (2011) Monitoring endangered freshwater biodiversity using environmental DNA. Molecular Ecology

Thormann B, Raupach MJ, Wagner T, Wagele JW, Peters MK (2011) Testing a short nuclear marker for inferring staphylinid beetle diversity in an african tropical rain forest. PLoS ONE 6: e18101

Tovar-Hernandez MA, Carrera-Parra LF (2011) Megalomma Johansson, 1925 (Polychaeta: Sabellidae) from America and other world-wide localities, and phylogenetic relationships within the genus. Zootaxa: 1-71

Triantafyllidis A, Bobori D, Koliamitra C, Gbandi E, Mpanti M, Petriki O, Karaiskou N (2011) DNA barcoding analysis of fish species diversity in four north Greek lakes. Mitochondrial DNA 22 (S1): 37-42

Triponez Y, Buerki S, Borer M, Naisbit RE, Rahier M, Alvarez N (2011) Discordances between phylogenetic and morphological patterns in alpine leaf beetles attest to an intricate biogeographic history of lineages in postglacial Europe. Molecular Ecology 20: 2442-2463


Vaz-Silva W, Maciel NM (2011) A new cryptic species of Ameerega (Anura: Dendrobatidae) from Brazilian Cerrado. Zootaxa: 57-68

Veijalainen A, Broad GR, Wahlberg N, Longino JT, Saaksjarvi IE (2011) DNA barcoding and morphology reveal two common species in one: Pimpla molesta stat. rev. separated from P. croceipes (Hymenoptera, Ichneumonidae). Zookeys: 59-70

Verneau O, Palacios C, Platt T, Alday M, Billard E, Allienne JF, Basso C, LH DUP (2011) Invasive species threat: parasite phylogenetics reveals patterns and processes of host-switching between non-native and native captive freshwater turtles. Parasitology 138: 1778-1792

Vickruck JL, Rehan SM, Sheffield CS, Richards MH (2011) Nesting biology and DNA barcode analysis of Ceratina dupla and C. mikmaqi, and comparisons with C. calcarata (Hymenoptera: Apidae: Xylocopinae). The Canadian Entomologist 143: 254-262

von Crautlein M, Korpelainen H, Pietilainen M, Rikkinen J (2011) DNA barcoding: a tool for improved taxon identification and detection of species diversity. Biodiversity and Conservation 20: 373-389

Vrålstad T (2011) ITS, OTUs and beyond—fungal hyperdiversity calls for supplementary solutions. Molecular Ecology 20: 2873-2875


Walsh J, Kovach AI, Lane OP, O’Brien KM, Babbitt KJ (2011) Genetic Barcode RFLP Analysis of the Nelson’s and Saltmarsh Sparrow Hybrid Zone. Wilson Journal of Ornithology 123: 316-322

Wang J, Wu Y, Ren G, Guo Q, Liu J, Lascoux M (2011) Genetic Differentiation and Delimitation between Ecologically Diverged Populus euphratica and P. pruinosa. PLoS ONE 6: e26530 EP

Wang Q, Yu QS, Liu JQ (2011) Are nuclear loci ideal for barcoding plants? A case study of genetic delimitation of two sister species using multiple loci and multiple intraspecific individuals. Journal of Systematics and Evolution 49: 182-188

Waugh J, Evans MW, Millar CD, Lambert DM (2011) Birdstrikes and barcoding: can DNA methods help make the airways safer? Molecular Ecology Resources 11: 38-45

Wei DD, Yuan ML, Wang ZY, Wang D, Wang BJ, Dou W, Wang JJ (2011) Sequence Analysis of the Ribosomal Internal Transcribed Spacers Region in Psocids (Psocoptera: Liposcelididae) for Phylogenetic Inference and Species Discrimination. Journal of Economic Entomology 104: 1720-1729

Weigand AM, Jochum A, Pfenninger M, Steinke D, Klussmann-Kolb A (2011) A new approach to an old conundrum – DNA barcoding sheds new light on phenotypic plasticity and morphological stasis in microsnails (Gastropoda, Pulmonata, Carychiidae). Molecular Ecology Resources 11: 255-265

Williams PH, An J-D, Huang J-X (2011) The bumblebees of the subgenus Subterraneobombus: integrating evidence from morphology and DNA barcodes (Hymenoptera, Apidae, Bombus). Zoological Journal of the Linnean Society, 163: 813-862. doi: 10.1111/j1096-3642.2011.00729.x | LINK

Wilson JJ (2011) DNA barcoding and Lepidoptera taxonomy. Doctoral Thesis. Integrative Biology, Guelph

Wilson JJ, Landry JF, Janzen DH, Hallwachs W, Nazari V, Hajibabaei M, Hebert PDN (2011) Identity of the ailanthus webworm moth (Lepidoptera,Yponomeutidae), a complex of two species: evidence from DNA barcoding, morphology and ecology. Zookeys: 41-60

Wilson JJ, Rougerie R, Schonfeld J, Janzen DH, Hallwachs W, Hajibabaei M, Kitching IJ, Haxaire J, Hebert PDN (2011) When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? An assessment using sphingid moths. BMC Ecology 11: 18

Wolf MA, Sfriso A, Andreoli C, Moro I (2011) The presence of exotic Hypnea flexicaulis (Rhodophyta) in the Mediterranean Sea as indicated by morphology, rbcL and cox1 analyses. Aquatic Botany 95: 55-58

Wong LL, Peatman E, Lu J, Kucuktas H, He S, Zhou C, Na-nakorn U, Liu Z (2011) DNA Barcoding of Catfish: Species Authentication and Phylogenetic Assessment. PLoS ONE 6: e17812

Wu LW, Lees DC, Yen SH, Lu CC, Hsu YF (2011) The Complete Mitochondrial Genome of the near-Threatened Swallowtail, Agehana maraho (Lepidoptera: Papilionidae): Evaluating Sequence Variability and Suitable Markers for Conservation Genetic Studies. Entomological News 121: 267-280

Wu R-X, Liu J, Ning P (2011) A New Record of the Headrabbit Puffer, Lagocephalus lagocephalus (Linnaeus, 1758) from China Seas. Acta Zootaxonomica Sinica 36

Wu Y-P, Ding L, Li J, Wu C-S, Fan R-J, Zhu C-D (2011) DNA barcoding: current progresses and discussions. Huanjing Kunchong Xuebao 33

Wu Y-P, Yu F, Zhang Y-Z, Zhu C-D, Wu C-S (2011) DNA barcoding of three species in Sphingidae from an orchard. Acta Zootaxonomica Sinica 35


Xia Y, Gu HF, Peng R, Chen Q, Zheng YC, Murphy RW, Zeng XM (2011) COI is better than 16S rRNA for DNA barcoding Asiatic salamanders (Amphibia: Caudata: Hynobiidae). Molecular Ecology Resources online early

Xiang XG, Hu H, Wang W, Jin XH (2011) DNA barcoding of the recently evolved genus Holcoglossum (Orchidaceae: Aeridinae): a test of DNA barcode candidates. Mol Ecol Resour 11: 1012-1021

Xiang XG, Zhang JB, Lu AM, Li RQ (2011) Molecular identification of species in Juglandaceae: A tiered method. Journal of Systematics and Evolution 49: 252-260

Xiao WL, Motley TJ, Unachukwu UJ, Lau CB, Jiang B, Hong F, Leung PC, Wang QF, Livingston PO, Cassileth BR, Kennelly EJ (2011) Chemical and Genetic Assessment of Variability in Commercial Radix Astragali (Astragalus spp.) by Ion Trap LC-MS and Nuclear Ribosomal DNA Barcoding Sequence Analyses. J Agric Food Chem 59: 1548-1556

Yan HF, Hao G, Hu CM, Ge XJ (2011) DNA barcoding in closely related species: A case study of Primula L. sect. Proliferae Pax (Primulaceae) in China. Journal of Systematics and Evolution 49: 225-236

Yang B, Cai J, Cheng X (2011) Identification of astigmatid mites using ITS2 and COI regions. Parasitol Res 108: 497-503

Yang CH, Chen IS, Chan TY (2011) A new slipper lobster of the genus Galearctus Holthuis, 2002 (Crustacea, Decapoda, Scyllaridae) from New Caledonia. Zoosystema 33: 207-217

Yang J-B, Wang Y-P, Möller M, Gao L-M, Wu D (2011) Applying plant DNA barcodes to identify species of Parnassia (Parnassiaceae). Molecular Ecology Resources

Yesson C, Barcenas RT, Hernandez HM, De La Luz Ruiz-Maqueda M, Prado A, Rodriguez VM, Hawkins JA (2011) DNA barcodes for Mexican Cactaceae, plants under pressure from wild collecting. Molecular Ecology Resources 11: 775-783

Yu DB, Chen R, Kaleri HA, Jiang BC, Xu HX, Du WX (2011) Testing the utility of mitochondrial cytochrome oxidase subunit 1 sequences for phylogenetic estimates of relationships between crane (Grus) species. Genet Mol Res 10

Yu J, Xue JH, Zhou SL (2011) New universal matK primers for DNA barcoding angiosperms. Journal of Systematics and Evolution 49: 176-181

Yu WB, Huang PH, Ree RH, Liu ML, Li DZ, Wang H (2011) DNA barcoding of Pedicularis L. (Orobanchaceae): Evaluating four universal barcode loci in a large and hemiparasitic genus. Journal of Systematics and Evolution 49: 425-437

Yukawa J, Sato S, Xu HL, Tokuda M (2011) Description of a new species of the genus Resseliella (Diptera: Cecidomyiidae), a pollinator of Kadsura longipedunculata (Schisandraceae) in China, with comments on its flower-visiting habit. Entomological Science 14: 297-303

Zaldivar-Riveron A, Martinez JJ, Ceccarelli FS, De Jesús-Bonilla VS, Rodriguez-Perez AC, Resendiz-Flores A, Smith MA (2011) DNA barcoding a highly diverse group of parasitoid wasps (Braconidae: Doryctinae) from a Mexican nature reserve. Mitochondrial DNA 21: 18-23

Zeale MRK, Butlin RK, Barker GLA, Lees DC, Jones G (2011) Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces. Molecular Ecology Resources 11: 236-244

Zhang AB, Muster C, Liang HB, Zhu CD, Crozier R, Wan P, Feng J, Ward RD (2011) A fuzzy-set-theory-based approach to analyse species membership in DNA barcoding. Mol Ecol

Zhang CY, Wang FY, Hai-Fei Y, Gang H, H. C-M-, Xue-Jun G (2011) Testing DNA barcoding in closely related groups of Lysimachia L. (Myrsinaceae). Molecular Ecology Resources

Zhang H, Zhang Y, Gao TX, Li PF, Xu HX (2011) Genetic identification of two species of Pleuronichthys by DNA barcoding. Chinese Journal of Oceanology and Limnology 29: 967-972

Zhang J (2011) Species identification of marine fishes in china with DNA barcoding. Evid Based Complement Alternat Med: 78253-78253

Zhang JB, Hanner R (2011) DNA barcoding is a useful tool for the identification of marine fishes from Japan. Biochemical Systematics and Ecology 39: 31-42

Zhang Y, Guo X-H, Liu G-C, Zhang Z (2011) Application of DNA barcodes to molecular systematics of Coleoptera. Chinese Journal of Applied Entomology 48

Zhang YZ, Si SL, Zheng JT, Li HL, Fang Y, Zhu CD, Vogler AP (2011) DNA barcoding of endoparasitoid wasps in the genus Anicetus reveals high levels of host specificity (Hymenoptera: Encyrtidae). Biological Control 58: 182-191

Zhao P, Luo J, Zhuang WY (2011) Practice towards DNA barcoding of the nectriaceous fungi. Fungal Diversity 46: 183-191

Zhao P, Luo J, Zhuang WY, Liu XZ, Wu B (2011) DNA barcoding of the fungal genus Neonectria and the discovery of two new species. Science China-Life Sciences 54: 664-674

Zhou X, Robinson JL, Geraci CJ, Parker CR, Flint OS, Etnier DA, Ruiter D, DeWalt RE, Jacobus LM, Hebert PDN (2011) Accelerated construction of a regional DNA-barcode reference library: caddisflies (Trichoptera) in the Great Smoky Mountains National Park. Journal of the North American Benthological Society 30: 131-162

Zimmermann J, Jahn R, Gemeinholzer B (2011) Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. Organisms Diversity & Evolution 11: 173-192

Zou S, Li Q, Kong L (2011) Multigene Barcoding and Phylogeny of Geographically Widespread Muricids (Gastropoda: Neogastropoda) Along the Coast of China. Mar Biotechnol (NY)

Zou S, Li Q, Kong L, Yu H, Zheng X (2011) Comparing the usefulness of distance, monophyly and character-based DNA barcoding methods in species identification: a case study of neogastropoda. PLoS ONE 6: e26619






Adamski D, Copeland RS, Miller SE, Darrow K, Hebert PDN, Luke Q (2010) A Review of African Blastobasinae (Lepidoptera: Gelechioidea: Coleophoridae), with New Taxa Reared from Native Fruits in Kenya. Smithsonian Contributions to Zoology 630: 1-63

Allcock, A. L., Barratt, I., Eléaume, M., Linse, K., Norman, M. D., Smith, P. J., et al. (2010). Cryptic speciation and the circumpolarity debate: A case study on endemic Southern Ocean octopuses using the COI barcode of life. Deep Sea Research Part II: Topical Studies in Oceanography, Online Early.

Ardura, A., Linde, A. R., Moreira, J. C., & Garcia-Vazquez, E. (2010). DNA barcoding for conservation and management of Amazonian commercial fish. Biological Conservation, 143(6), 1438-1443.

Augot, D., Sauvage, F., Jouet, D., Simphal, E., Veuille, M., Couloux, A., et al. (2010). Discrimination of Culicoides obsoletus and Culicoides scoticus, potential bluetongue vectors, by morphometrical and mitochondrial cytochrome oxidase subunit I analysis. Infect Genet Evol, 10(5), 629-637.

Azpurua, J., De La Cruz, D., Valderama, A., & Windsor, D. (2010). Lutzomyia sand fly diversity and rates of infection by wolbachia and an exotic leishmania species on barro colorado island, panama. PLoS Negl Trop Dis, 4(3), e627.


Boehme, P., Amendt, J., Disney, R. H., & Zehner, R. (2010). Molecular identification of carrion-breeding scuttle flies (Diptera: Phoridae) using COI barcodes. Int J Legal Med, 124(6), 577-581.

Bruni, I., De Mattia, F., Galimberti, A., Galasso, G., Banfi, E., Casiraghi, M., et al. (2010). Identification of poisonous plants by DNA barcoding approach. Int J Legal Med.

Bruni, I., De Mattia, F., Galimberti, A., Galasso, G., Banfi, E., Casiraghi, M., et al. (2010). Identification of poisonous plants by DNA barcoding approach. International Journal of Legal Medicine, 124(6), 595-603.

Bucklin, A., Steinke, D., & Blanco-Bercial, L. (2010). DNA Barcoding of Marine Metazoa. Annual Review of Marine Science, 3(1).


Cai, Y., Yue, B., Jiang, W., Xie, S., Li, J., & Zhou, M. (2010). DNA barcoding on subsets of three families in Aves. Mitochondrial DNA, 21(3-4), 132-137.

Campagna, L., Lijtmaer, D. A., Kerr, K. C. R., Barreira, A. S., Hebert, P. D. N., Lougheed, S. C., et al. (2010). DNA barcodes provide new evidence of a recent radiation in the genus Sporophila (Aves: Passeriformes). Molecular Ecology Resources, 10(3), 449-458.

Chen, J., Li, Q., Kong, L. F., Zheng, X. D., & Yu, R. H. (2010). [COI-based DNA Barcoding in Tapetinae Species (Mollusca, Bivalvia, Veneridae) Along the Coast of CHINA.]. Dongwuxue Yanjiu, 31(4), 345-352.

Chen, S., Yao, H., Han, J., Liu, C., Song, J., Shi, L., et al. (2010). Validation of the ITS2 Region as a Novel DNA Barcode for Identifying Medicinal Plant Species. PLoS ONE, 5(1), e8613.

Clarkston, B. E., & Saunders, G. W. (2010). A comparison of two DNA barcode markers for species discrimination in the red algal family Kallymeniaceae (Gigartinales, Florideophyceae), with a description of Euthora timburtonii sp. nov. Botany, 88, 119-131.

Costa, F. O., & Carvalho, G. R. (2010). New insights into molecular evolution: prospects from the Barcode of Life Initiative (BOLI). Theory Biosci, 129(2-3), 149-157.

Craft, K. J., Pauls, S. U., Darrow, K., Miller, S. E., Hebert, P. D. N., Helgen, L. E., et al. (2010). Population genetics of ecological communities with DNA barcodes: An example from New Guinea Lepidoptera. Proc Natl Acad Sci U S A, 107(11), 5041-5046.

Crawford, A. J., Lips, K. R., & Bermingham, E. (2010). Epidemic disease decimates amphibian abundance, species diversity, and evolutionary history in the highlands of central Panama. Proc Natl Acad Sci U S A, 107(31), 13777-13782.

Cywinska, A., Hannan, M. A., Kevan, P. G., Roughley, R. E., Iranpour, M., & Hunter, F. F. (2010). Evaluation of DNA barcoding and identification of new haplomorphs in Canadian deerflies and horseflies. Medical and Veterinary Entomology, Online Early.


Dasmahapatra, K. K., Elias, M., Hill, R. I., Hoffman, J. I., & Mallet, J. (2010). Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources, 10(2), 264-273.

deWaard, J., Humble, L. M., & Schmidt, B. C. S. (2010). DNA barcoding identifies the first North American records of the Eurasian moth, Eupithecia pusillata (Lepidoptera: Geometridae). Journal of the Entomological Society of BC, 107, 25–31.

Dinca, V., Zakharov, E. V., Hebert, P. D., & Vila, R. (2010). Complete DNA barcode reference library for a country’s butterfly fauna reveals high performance for temperate Europe. Proc Biol Sci, Online Early.


Eaton, M. J., Meyers, G. L., Kolokotronis, S.-O., Leslie, M. S., Martin, A. P., & Amato, G. (2010). Barcoding bushmeat: molecular identification of Central African and South American harvested vertebrates. Conservation Genetics, 11(4), 1389-1404.

Ebihara, A., Nitta, J. H., & Ito, M. (2010). Molecular Species Identification with Rich Floristic Sampling: DNA Barcoding the Pteridophyte Flora of Japan. PLoS ONE, 5(12), e15136.

Ejnavarzala, H. (2010). DNA barcoding: access to biodiversity and benefit-sharing policy issues in the Indian context. CURRENT SCIENCE, 99(5), 594-600.

Ekrem, T., Stur, E., & Hebert, P. (2010). Females do count: Documenting Chironomidae (Diptera) species diversity using DNA barcoding. Organisms Diversity & Evolution, 10(5), 397-408.


Fernandez-Triana, J. (2010). Eight new species and an annotated checklist of Microgastrinae (Hymenoptera, Braconidae) from Canada and Alaska. ZooKeys, 63, 1-53.

Floyd, R., Lima, J., deWaard, J., Humble, L., & Hanner, R. (2010). Common goals: policy implications of DNA barcoding as a protocol for identification of arthropod pests. Biological Invasions, 12(9), 2947-2954.

Francis, C. M., Borisenko, A. V., Ivanova, N. V., Eger, J. L., Lim, B. K., Guillen-Servent, A., et al. (2010). The role of DNA barcodes in understanding and conservation of mammal diversity in southeast Asia. PLoS One, 5(9), e12575.


Gao, T., Sun, Z., Yao, H., Song, J., Zhu, Y., Ma, X., et al. (2010). Identification of Fabaceae Plants Using the DNA Barcode matK. Planta Med.

Gao, T., Yao, H., Song, J., Liu, C., Zhu, Y., Ma, X., et al. (2010). Identification of medicinal plants in the family Fabaceae using a potential DNA barcode ITS2. J Ethnopharmacol, 130(1), 116-121.

Geraci, C. J., Zhou, X., Morse, J. C., & Kjer, K. M. (2010). Defining the genus Hydropsyche (Trichoptera:Hydropsychidae) based on DNA and morphological evidence. Journal of the North American Benthological Society, 29(3), 918-933.

Gibbs, J. (2010). An Aberrant Bee of the Species Lasioglossum (Dialictus) disparile (Cresson) (Hymenoptera: Halictidae) with Brief Taxonomic Notes on the Species. Journal of the Kansas Entomological Society, 83(1), 92-96.

Gibbs, J. (2010). Atypical Wing Venation in Dialictus and Hemihalictus and Its Implications for Subgeneric Classification of Lasioglossum. Psyche, 2010.

Gile, G. H., Stern, R. F., James, E. R., & Keeling, P. J. (2010). DNA barocding of Chlorarachniophytes using nucleomorph ITS Sequences. Journal of Phycology, 46(4), 743-750.

Grant, R., Griffiths, H., Steinke, D., Wadley, V., & Linse, K. (2010). Antarctic DNA barcoding; a drop in the ocean? Polar Biology, 34, 1-6.


Hardy, S., Carr, C., Hardman, M., Steinke, D., Corstorphine, E., & Mah, C. (2010). Biodiversity and phylogeography of Arctic marine fauna: insights from molecular tools. Marine Biodiversity, Online Early, 1-16.

Hayward, A. (2010). Cryptic diversity and patterns of host specificity in trematode flatworms. Molecular Ecology, 19(13), 2602-2604.

Hebert, P. D., Dewaard, J. R., & Landry, J. F. (2010). DNA barcodes for 1/1000 of the animal kingdom. Biol Lett, 6(3), 359-362.

Holynski, R. B. (2010). Taxonomy and the Mediocrity of DNA Barcoding – Some Remarks on PACKER et al. 2009: DNA Barcoding and the Mediocrity of Morphology. Arthropod Systematics & Phylogeny, 68(1), 143-150.

Hu, J., Zhang, D., Hao, J., Huang, D., Cameron, S., & Zhu, C. (2010). The complete mitochondrial genome of the yellow coaster, Acraeat issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event. Molecular Biology Reports, 37(7), 3431-3438.

Hunt, B., Strugnell, J., Bednarsek, N., Linse, K., Nelson, R. J., Pakhomov, E., et al. (2010). Poles Apart: The “Bipolar” Pteropod Species Limacina helicina Is Genetically Distinct Between the Arctic and Antarctic Oceans. PLoS ONE, 5(3), e9835.


James, S. W., Porco, D., Decaëns, T., Richard, B., Rougerie, R., & Erse´us, C. (2010). DNA Barcoding Reveals Cryptic Diversity in Lumbricus terrestris L., 1758 (Clitellata): Resurrection of L. herculeus (Savigny, 1826). PLoS ONE, 5(12), e15629.

Jargeat, P., Martos, F., Carriconde, F., Gryta, H., Moreau, P. A., & Gardes, M. (2010). Phylogenetic species delimitation in ectomycorrhizal fungi and implications for barcoding: the case of the Tricholoma scalpturatum complex (Basidiomycota). Mol Ecol, Online Early.

Jennings, R. M., Bucklin, A., & Pierrot-Bults, A. (2010). Barcoding of arrow worms (Phylum Chaetognatha) from three oceans: genetic diversity and evolution within an enigmatic phylum. PLoS One, 5(4), e9949.


Kaartinen, R., Stone, G. N., Hearn, J., Lohse, K., & Roslin, T. (2010). Revealing secret liaisons: DNA barcoding changes our understanding of food webs. Ecological Entomology, 35(5), 623-638.

Kang, S., Mansfield, M. A., Park, B., Geiser, D. M., Ivors, K. L., Coffey, M. D., et al. (2010). The Promise and Pitfalls of Sequence-Based Identification of Plant-Pathogenic Fungi and Oomycetes. Phytopathology, 100(8), 732-737.


Lees, D. C., Rougerie, R., Zeller-Lukashort, C., & Kristensen, N. P. (2010). DNA mini-barcodes in taxonomic assignment: a morphologically unique new homoneurous moth clade from the Indian Himalayas described in Micropterix (Lepidoptera, Micropterigidae). Zoologica Scripta, 39(6), 642-661.

LeGall, L., & Saunders, G. W. (2010). DNA barcoding is a powerful tool to uncover algal diversity: A case study of the Phyllophoraceae (Gigartinales, Rhodophyta) in the Canadian flora. Journal of Phycology, 46(2), 374 – 389.

Levesque, C. A., Brouwer, H., Cano, L., Hamilton, J. P., Holt, C., Huitema, E., et al. (2010). Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Genome Biol, 11(7), R73.

Locke, S. A., McLaughlin, J. D., Dayanandan, S., & Marcogliese, D. J. (2010). Diversity and specificity in Diplostomum spp. metacercariae in freshwater fishes revealed by cytochrome c oxidase I and internal transcribed spacer sequences. Int J Parasitol, 40(3), 333-343.

Locke, S. A., Mclaughlin, J. D., & Marcogliese, D. J. (2010). DNA barcodes show cryptic diversity and a potential physiological basis for host specificity among Diplostomoidea (Platyhelminthes: Digenea) parasitizing freshwater fishes in the St. Lawrence River, Canada. Molecular Ecology, 19(13), 2813-2827.


Margam, V., Coates, B., Ba, M., Sun, W., Binso-Dabire, C., Baoua, I., et al. (2010). Geographic distribution of phylogenetically-distinct legume pod borer, Maruca vitrata (Lepidoptera: Pyraloidea: Crambidae). Molecular Biology Reports, Online Early.

Mecklenburg, C., Møller, P., & Steinke, D. (2010). Biodiversity of arctic marine fishes: taxonomy and zoogeography. Marine Biodiversity, 41, 1-32.

Moniz, M. B., & Kaczmarska, I. (2010). Barcoding of Diatoms: Nuclear Encoded ITS Revisited. Protist, 161, 7–34.

Mutanen, M., Wahlberg, N., & Kaila, L. (2010). Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies. Proc Biol Sci, 277(1695), 2839-2848.


Nazari, V., Hagen, W. T., & Bozano, G. C. (2010). Molecular systematics and phylogeny of the ‘Marbled Whites’ (Lepidoptera: Nymphalidae, Satyrinae, Melanargia Meigen). Systematic Entomology, 35(1), 132-147.

Newmaster, S., & Ragupathy, S. (2010). Ethnobotany genomics – discovery and innovation in a new era of exploratory research. Journal of Ethnobiology and Ethnomedicine, 6(1), 2.

Nock, C. J., Waters, D. L., Edwards, M. A., Bowen, S. G., Rice, N., Cordeiro, G. M., et al. (2010). Chloroplast genome sequences from total DNA for plant identification. Plant Biotechnol J.


O’Dor, R., Acosta, J., Bergstad, O. A., Brainard, R., Brattey, J., Canals, M., et al. (2010). Bringing Life To Ocean Observatio. In J. Hall, Harrison, D.E. & Stammer, D., Eds (Ed.), Proceedings of OceanObs’09: Sustained Ocean Observations and Information for Society (Vol. 1). Venice, Italy, 21-25 September 2009: ESA Publication WPP-306.

Padial, J. M., Miralles, A., De la Riva, I., & Vences, M. (2010). The integrative future of taxonomy. Front Zool, 7, 16.

Pang, X., Song, J., Zhu, Y., Xie, C., & Chen, S. (2010). Using DNA Barcoding to Identify Species within Euphorbiaceae. Planta Med.

Pauls, S. U., Blahnik, R. J., Zhou, X., Wardwell, C. T., & Holzenthal, R. W. (2010). DNA barcode data confirm new species and reveal cryptic diversity in Chilean Smicridea (Smicridea) (Trichoptera:Hydropsychidae). Journal of the North American Benthological Society, 29(3), 1058-1074.

Pfrender, M. E., Hawkins, C. P., Bagley, M., Courtney, G. W., Creutzburg, B. R., Epler, J. H., et al. (2010). Assessing macroinvertebrate biodiversity in freshwater ecosystems: advances and challenges in DNA-based approaches. Q Rev Biol, 85(3), 319-340.

Porco, D., Bedos, A., & Deharveng, L. (2010). Description and DNA barcoding assessment of the new species Deutonura gibbosa (Collembola: Neanuridae: Neanurinae), a common springtail of Alps and Jura. Zootaxa, 2639, 59–68.

Porco, D., Rougerie, R., Deharveng, L., & Hebert, P. (2010). Coupling non-destructive DNA extraction and voucher retrieval for small soft-bodied Arthropods in a high-throughput context: the example of Collembola. Molecular Ecology Resources, 10(6), 942-945.

Pryer, K. M., Schuettpelz, E., Huiet, L., Grusz, A. L., Rothfels, C. J., Avent, T., et al. (2010). DNA barcoding exposes a case of mistaken identity in the fern horticultural trade. Molecular Ecology Resources, Online Early.

Pryer, K. M., Schuettpelz, E., Huiet, L., Grusz, A. L., Rothfels, C. J., Avent, T., et al. (2010). DNA barcoding exposes a case of mistaken identity in the fern horticultural trade. Molecular Ecology Resources, 10(6), 979-985.


Radulovici, A. E., Archambault, P., & Dufresne, F. (2010). DNA Barcodes for Marine Biodiversity: Moving Fast Forward? Diversity, 2(4), 450-472.

Riedel, A., Daawia, D., & Balke, M. (2010). Deep cox1 divergence and hyperdiversity of Trigonopterus weevils in a New Guinea mountain range (Coleoptera, Curculionidae). Zoologica Scripta, 39(1), 63-74.

Ruiz, F., Linton, Y. M., Ponsonby, D. J., Conn, J. E., Herrera, M., Quinones, M. L., et al. (2010). Molecular comparison of topotypic specimens confirms Anopheles (Nyssorhynchus) dunhami Causey (Diptera: Culicidae) in the Colombian Amazon. Mem Inst Oswaldo Cruz, 105(7), 899-903.


Schneider, C. W. (2010). Report of a New Invasive Alga in the Atlantic United States: “Heterosiphonia” Japonica in Rhode Island. Journal of Phycology, 46(4), 653-657.

Seabra, S. G., Pina-Martins, F., Marabuto, E., Yurtsever, S., Halkka, O., Quartau, J. A., et al. (2010). Molecular phylogeny and DNA barcoding in the meadow-spittlebug Philaenus spumarius (Hemiptera, Cercopidae) and its related species. Mol Phylogenet Evol, 56(1), 462-467

Shokralla, S., Singer, G. A. C., & Hajibabaei, M. (2010). Direct PCR amplification and sequencing of specimens’ DNA from preservative ethanol. BioTechniques, 48(3), 305-306.

Smith, P. J., Steinke, D., McMillan, P. J., Stewart, A. L., McVeagh, S. M., Diaz de Astarloa, J. M., et al. (2010). DNA barcoding highlights a cryptic species of grenadier Macrourus in the Southern Ocean. Journal of Fish Biology, 78.

Sokolski, S., Dalpé, Y., Séguin, S., Khasa, D., Lévesque, C. A., & Piché, Y. (2010). Conspecificity of DAOM 197198, the model arbuscular mycorrhizal fungus, with Glomus irregulare: molecular evidence with three protein-encoding genes. Botany, 88(9), 829–838.

Sriwattanarothai, N., Steinke, D., Ruenwongsa, P., Hanner, R., & Panijpan, B. (2010). Molecular and morphological evidence supports the species status of the Mahachai fighter Betta sp. Mahachai and reveals new species of Betta from Thailand. J Fish Biol, 77(2), 414-424.

Steele, P. R., Friar, L. M., Gilbert, L. E., & Jansen, R. K. (2010). Molecular systematics of the neotropical genus Psiguria (Cucurbitaceae): Implications for phylogeny and species identification. Am. J. Bot., 97(1), 156-173.

Stern, R. F., Horak, A., Andrew, R. L., Coffroth, M.-A., Andersen, R. A., Kupper, F. C., et al. (2010). Environmental Barcoding Reveals Massive Dinoflagellate Diversity in Marine Environments. PLoS ONE, 5(11), e13991.

Stockinger, H., Kruger, M., & Schussler, A. (2010). DNA barcoding of arbuscular mycorrhizal fungi. New Phytol, 187(2), 461-474.

Trevors, J. T., Kevan, P. G., & Tam, L. (2010). Microbial diversity across a Canadian sub-Arctic, isostatically rebounding, soil transect. Polar Science, 4(1), 81-91.

Stoev, P., Akkari, N., Zapparoli, M., Porco, D., Enghoff, H., Edgecombe, G. D., et al. (2010). The centipede genus Eupolybothrus Verhoeff, 1907 (Chilopoda: Lithobiomorpha: Lithobiidae) in North Africa, a cybertaxonomic revision, with a key to all species in the genus and the first use of DNA barcoding for the group. Zookeys, 50, 29–77.


Teletchea, F. (2010). After 7 years and 1000 citations: Comparative assessment of the DNA barcoding and the DNA taxonomy proposals for taxonomists and non-taxonomists. Mitochondrial DNA, 21(6), 206-226.


Vernooy, R., Haribabu, E., Muller, M. R., Vogel, J. H., Hebert, P. D. N., Schindel, D. E., et al. (2010). Barcoding Life to Conserve Biological Diversity: Beyond the Taxonomic Imperative. PLoS Biol, 8(7), e1000417.

Victor, B. C. (2010). The Redcheek Paradox: the mismatch between genetic and phenotypic divergence among deeply-divided mtDNA lineages in a coral-reef goby, with the description of two new cryptic species from the Caribbean Sea. Journal of the Ocean Science Foundation, 3.

Victor, B. C., Vasquez-Yeomans, L., Valdez-Moreno, M., Wilk, L., Jones, D. L., Lara, M. R., et al. (2010). The larval, juvenile, and adult stages of the Caribbean goby, Coryphopterus kuna (Teleostei: Gobiidae): a reef fish with a pelagic larval duration longer than the post-settlement lifespan. Zootaxa, 2346, 53–61.


Wang, W., Wu, Y., Yan, Y., Ermakova, M., Kerstetter, R., & Messing, J. (2010). DNA barcoding of the Lemnaceae, a family of aquatic monocots. BMC Plant Biol, 10, 205.

Weigand, A. M., Jochum, A., Pfenninger, M., Steinke, D., & Klussmann-Kolb, A. (2010). A new approach to an old conundrum—DNA barcoding sheds new light on phenotypic plasticity and morphological stasis in microsnails (Gastropoda, Pulmonata, Carychiidae). Molecular Ecology Resources, 11.

Wilson, J. J. (2010). Assessing the value of DNA barcodes and other priority gene regions for molecular phylogenetics of Lepidoptera. PLoS One, 5(5), e10525.

Wilson, J. J., Landry, J.-F., Janzen, D. H., Hallwachs, W., Nazari, V., Hajibabaei, M., et al. (2010). Identity of the ailanthus webworm moth (Lepidoptera, Yponomeutidae), a complex of two species: evidence from DNA barcoding, morphology and ecology. ZooKeys, 40, 41–60.


Yassin, A., Markow, T. A., Narechania, A., O’Grady, P. M., & Desalle, R. (2010). The genus Drosophila as a model for testing tree- and character-based methods of species identification using DNA barcoding. Mol Phylogenet Evol.

Zaldívar-Riverón, A., Martínez, J. J., Ceccarelli, F. S., Jesús-Bonilla, V. S. D., Rodríguez-Pérez, A. C., Reséndiz-Flores, A., et al. (2010). DNA barcoding a highly diverse group of parasitoid wasps (Braconidae: Doryctinae) from a Mexican nature reserve. Mitochondrial DNA, 21(S1), 18–23.

Zeale, M. R. K., Butlin, R. K., Barker, G. L. A., Lees, D. C., & Jones, G. (2010). Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces. Molecular Ecology Resources, Online Early.

Zhou, X., Jacobus, L. M., DeWalt, R. E., Adamowicz, S. J., & Hebert, P. D. N. (2010). Ephemeroptera, Plecoptera, and Trichoptera fauna of Churchill (Manitoba, Canada): insights into biodiversity patterns from DNA barcoding. Journal of the North American Benthological Society, 29(3), 814-837.




Adamski D, Boege K, Landry JF, Sohn JC (2009) Two New Species of Wockia Heinemann (Lepidoptera: Urodidae) from Coastal Dry-Forests in Western Mexico. Proceedings of the Entomological Society of Washington 111: 166-182

Alcaide, M., Rico, C., Ruiz, S., Soriguer, R., Muñoz, J., & Figuerola, J. (2009). Disentangling Vector-Borne Transmission Networks: A Universal DNA Barcoding Method to Identify Vertebrate Hosts from Arthropod Bloodmeals. PLoS ONE, 4(9), e7092.

Alexander L, Delion M, Hawthorne D, Lamp W (2009) Mitochondrial lineages and DNA barcoding of closely related species in the mayfly genus Ephemerella (Ephemeroptera: Ephemerellidae). Journal of the North American Benthological Society 28: 584 – 595

Aliabadian M, Kaboli M, Nijman V, Vences M (2009) Molecular Identification of Birds: Performance of Distance-Based DNA Barcoding in Three Genes to Delimit Parapatric Species. PLoS ONE 4

Asase A, Oppong-Mensah G (2009) Traditional antimalarial phytotherapy remedies in herbal markets in southern Ghana. Journal of Ethnopharmacology 126: 492-499

Ascunce MS, Nigg HN, Clark A (2009) Molecular Identification of the Economically Important Invasive Citrus Root Weevil Diaprepes abbreviatus (Coleoptera: Curculionidae). Florida Entomologist 92: 167-172

Austerlitz F, David O, Schaeffer B, Bleakley K, Olteanu M, Leblois R, Veuille M, Laredo C (2009) DNA barcode analysis: a comparison of phylogenetic and statistical classification methods. BMC Bioinformatics 10

Ausubel JH (2009) A botanical macroscope. Proceedings of the National Academy of Sciences 106: 12569-12570

Baldwin CC, Mounts JH, Smith DG, Weigt LA (2009) Genetic identification and color descriptions of early life-history stages of Belizean Phaeoptyx and Astrapogon (Teleostei: Apogonidae) with Comments on identification of adult Phaeoptyx. Zootaxa 2008: 1-22

Baldwin CC, Weigt LA, Smith DG, Mounts JH (2009) Reconciling Genetic Lineages with Species in Western Atlantic Coryphopterus (Teleostei: Gobiidae). Smithsonian Contributions to the Marine Sciences: 111-138

Baker, A. J., Tavares, E. S., & Elbourne, R. F. (2009). Countering criticisms of single mitochondrial DNA gene barcoding in birds. Molecular Ecology Resources, 9(s1), 257-268.

Ballard JWO, Puslednik L, Wolff JN, Russell RC (2009) Variation Under Nature: A Sesquicentennial DNA Barcoding Perspective. Chiang Mai Journal of Science 36: 188-199

Basquin P, Rougerie R (2009) Contribution to the knowledge of the genus Maltagorea Bouyer, 1993: description of a new species revealed by a combination of morphological characters and DNA barcoding (Lepidoptera, Saturniinae). Bulletin de la Societe Entomologique de France 114: 257-264

Bellwood DR, Meyer CP (2009) Endemism and evolution in the Coral Triangle: a call for clarity. Journal of Biogeography 36: 2010-2012

Bergmann T, Hadrys H, Breves G, Schierwater B (2009) Character-based DNA barcoding: a superior tool for species classification. Berliner Und Munchener Tierarztliche Wochenschrift 122: 446-450

Bertolazzi P, Felici G, Weitschek E (2009) Learning to classify species with barcodes. BMC Bioinformatics 10: S7

Bertsch, A. (2009). Barcoding cryptic bumblebee taxa: B. lucorum, B. crytarum and B. magnus, a case study. Beitr. Ent., 59(2), 287-310.

Birstein VJ, Desalle R, Doukakis P, Hanner R, Ruban GI, Wong E (2009) Testing taxonomic boundaries and the limit of DNA barcoding in the Siberian sturgeon, Acipenser baerii. Mitochondrial DNA 20: 110-118

Bonito G (2009) Fast DNA-based identification of the black truffle Tuber melanosporum with direct PCR and species-specific primers. Fems Microbiology Letters 301: 171-175

Boo GH, Cho SM, Shin W, Boo SM (2009) An Evaluation of Promising Barcode Genes for Synura petersenii (Synurophyceae). Phycologia 48: 29

Borisenko, A. V., Kruskop, S. V., & Ivanova, N. V. (2009). A new mouse-eared bat (Mammalia: Chiroptera: Vespertilionidae) from Vietnam. Russian Journal of Theriology, 7(2), 57-69.

Borisenko, A. V., Sones, J. E., & Hebert, P. D. N. (2009). The front-end logistics of DNA barcoding: challenges and prospects. Molecular Ecology Resources, 9(s1), 27-34.

Boulding, E. G., deWaard, J. R., Ang, K. P., & Hebert, P. D. N. (2009). Population genetic structure of the salmon louse, Lepeophtheirus salmonis (Krøyer) on wild and farmed salmonids around the Pacific coast of Canada. Aquaculture Research, 40(8), 973-979.

Boyer SL, Szumowski SC, Howe AA, Hove MC, Hornbach DJ (2009) Comparative Phylogeography and DNA Barcoding of Freshwater Mussels. Integrative and Comparative Biology 49: E19-E19

Bromham L (2009) Putting the ‘bio’ into bioinformatics Introduction. Biology Letters 5: 391-393

Braukmann, T. W. A., Kuzmina, M., & Stefanovic, S. (2009). Loss of all plastid ndh genes in Gnetales and conifers: extent and evolutionary significance for the seed plant phylogeny Current Genetics, 55(3), 323-337.

Brown MJF, Paxton RJ (2009) The conservation of bees: a global perspective. Apidologie 40: 410-416

Bucklin A, Frost BW (2009) Morphological and Molecular Phylogenetic Analysis of Evolutionary Lineages within Clausocalanus (Copepoda: Calanoida). Journal of Crustacean Biology 29: 111-120

Buhay JE (2009) “Coi-Like” Sequences Are Becoming Problematic in Molecular Systematic and DNA Barcoding Studies. Journal of Crustacean Biology 29: 96-110

Burns JM, Janzen DH, Hallwachs W, Hajibabaei M, Hebert PDN (2009) Genitalia, DNA Barcodes, and life histories synonymize Telles with Thracides – a genus in which Telles arcalaus looks out of place (Hesperiidae: Hesperiinae). Journal of the Lepidopterists Society 63: 141-153

Can F (2009) DNA barcoding confirms species rank for a cryptic geometrid species from Turkey and Bulgaria (Lepidoptera: Geometridae: Sterrhinae). Zootaxa: 63-68

Cardenas P, Menegola C, Rapp HT, Diaz MC (2009) Morphological description and DNA barcodes of shallow-water Tetractinellida (Porifera: Demospongiae) from Bocas del Toro, Panama, with description of a new species. Zootaxa: 1-39

Carstensen D, Laudien J, Leese F, Arntz W, Held C (2009) Genetic variability, shell and sperm morphology suggest that the surf clams Donax marincovichi and D. obesulus are one species. J. Mollus. Stud. 75: 381-390

Cesari M, Bertolani R, Rebecchi L, Guidetti R (2009) DNA barcoding in Tardigrada: the first case study on Macrobiotus macrocalix Bertolani & Rebecchi 1993 (Eutardigrada, Macrobiotidae). Molecular Ecology Resources 9: 699-706

Chang, C.-H., Rougerie, R., & Chen, J.-H. (2009). Identifying earthworms through DNA barcodes: Pitfalls and promise. Pedobiologia, 52(3), 171-180.

Chase, M. W., & Fay, M. F. (2009). Barcoding of Plants and Fungi. Science, 325, 682-683.

Chen Q, Bai J, Liu L, Lin H-B, Tang H, Zhao W, Zhou H-Z, Yan J-W, Liu Y-C, Song-Nian H (2009) Sequential analysis of mitochondrial COI gene for seven common sarcosaphagous flies (Diptera) in Beijing and the establishment of their DNA barcodes. Acta Entomologica Sinica 52: 202-209

Chen, W., Seifert, K. A., & Levesque, C. A. (2009). A high density COX1 barcode oligonucleotide array for identification and detection of species of Penicillium subgenus Penicillium. Molecular Ecology Resources, 9(s1), 114-129.

Cheung PP, Leung YHC, Chow CK, Ng CF, Tsang CL, Wu YO, Ma SK, Sia SF, Guan Y, Peiris JSM (2009) Identifying the species-origin of faecal droppings used for avian influenza virus surveillance in wild-birds. Journal of Clinical Virology 46: 90-93

Chu KH, Xu M, Li CP (2009) Rapid DNA barcoding analysis of large datasets using the composition vector method. BMC Bioinformatics 10

Clare, E. L., Fraser, E. E., Braid, H. E., Fenton, M. B., & Hebert, P. D. N. (2009). Species on the menu of a generalist predator, the eastern red bat (Lasiurus borealis): using a molecular approach to detect arthropod prey. Molecular Ecology, 18(11), 2532-2542.

Cohen, N. J., Deeds, J. R., Wong, E. S., Hanner, R. H., Yancy, H. F., White, K. D., et al. (2009). Public Health Response to Puffer Fish (Tetrodotoxin) Poisoning from Mislabeled Product. Journal of Food Protection, 72(4), 810-817.

Coleman A (2009) Is there a molecular key to the level of “biological species” in eukaryotes? A DNA guide. Mol Phylogenet & Evol 50: 197 – 203

Conklin KY, Kurihara A, Sherwood AR (2009) A molecular method for identification of the morphologically plastic invasive algal genera Eucheuma and Kappaphycus (Rhodophyta, Gigartinales) in Hawaii. Journal of Applied Phycology 21: 691-699

Costa FO, Henzler CM, Lunt DH, Whiteley NM, Rock J (2009) Probing marine Gammarus (Amphipoda) taxonomy with DNA barcodes. Systematics and Biodiversity 7: 365-379

Crozier R, Agapow P, Smith M (2009) Conservation genetics: from species to habitats. Biol Int 47: 73 – 79

Davison A, Blackie RLE, Scothern GP (2009) DNA barcoding of stylommatophoran land snails: a test of existing sequences. Molecular Ecology Resources 9: 1092-1101 de Carvalho MR, Ebach MC (2009) Death of the specialist, rise of the machinist. History and Philosophy of the Life Sciences 31: 467-469

Deagle BE, Kirkwood R, Jarman SN (2009) Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces. Molecular Ecology 18: 2022-2038

Dentinger BTM, Margaritescu S, Moncalvo JM (2009) Rapid and reliable high-throughput methods of DNA extraction for use in barcoding and molecular systematics of mushrooms. Molecular Ecology Resources 10: 615-627

De Prins, J., Mozuraitis, R., Lopez-Vaamonde, C., & Rougerie, R. (2009). Sex attractant, distribution and DNA barcodes for the Afrotropical leaf-mining moth Phyllonorycter melanosparta (Lepidoptera: Gracillariidae). Zootaxa, 2281, 53-67.

Desmyter S, Gosselin M (2009) COI sequence variability between Chrysomyinae of forensic interest. Forensic Science International-Genetics 3: 89-95

Destombe C, Valero M, Guillemin ML (2009) Sibling Species Identification in Gracilaria gracilis Complex Species through Multi Markers Barcoding Approaches. Phycologia 48: 72

Devey DS, Chase MW, Clarkson JJ (2009) A stuttering start to plant DNA barcoding: microsatellites present a previously overlooked problem in non-coding plastid regions. Taxon 58: 7-15

deWaard, J. R., Landry, J.-F., Schmidt, B. C., Derhousoff, J., McLean, J. A., & Humble, L. M. (2009). In the dark in a large urban park: DNA barcodes illuminate cryptic and introduced moth species. Biodiversity and Conservation, 18(14), 3825-3839.

Dick CW, Kress WJ (2009) Dissecting Tropical Plant Diversity with Forest Plots and a Molecular Toolkit. Bioscience 59: 745-755

Doganlar M, Gumovsky A, Doganlar O (2009) A new species of the menes species group of the genus Ceranisus (Hymenoptera: Eulophidae) from Turkey. Turkiye Entomoloji Dergisi-Turkish Journal of Entomology 33: 265-278

Dove CJ, Dahlan NF, Heacker M (2009) Forensic bird-strike identification techniques used in an accident investigation at Wiley Post Airport, Oklahoma, 2008. Human-Wildlife Conflicts 3: 179-185

Draber-Mońko, A., Malewski, T., Pomorski, J., Łoś, M., & Ślipiński, P. (2009). On the Morphology and Mitochondrial DNA Barcoding of the Flesh Fly Sarcophaga (Liopygia) Argyrostoma (Robineau-Desvoidy, 1830) (Diptera: Sarcophagidae) — An Important Species in Forensic Entomology. Annales Zoologici, 59(4), 465-493.

Dunphy BM, Tucker BJ, Petersen MJ, Blitvich BJ, Bartholomay LC (2009) Arrival and Establishment of Aedes japonicus japonicus (Diptera: Culicidae) in Iowa. Journal of Medical Entomology 46: 1282-1289

Eaton M, Meyers G, Kolokotronis S-O, Leslie M, Martin A, Amato G (2009) Barcoding bushmeat: molecular identification of Central African and South American harvested vertebrates. Conservation Genetics

Efe, M. A., Tavares, E. S., Baker, A. J., & Bonatto, S. L. (2009). Multigene phylogeny and DNA barcoding indicate that the Sandwich tern complex (Thalasseus sandvicensis, Laridae, Sternini) comprises two species. Molecular Phylogenetics and Evolution, 52(1), 263-267.

Elsasser, S. C., Floyd, R., Hebert, P. D. N., & Schulte-Hostedde, A. I. (2009). Species identification of North American guinea worms (Nematoda: Dracunculus) with DNA barcoding. Molecular Ecology Resources, 9, 707-712.

Emery, V. J., Landry, J.-F., & Eckert, C. G. (2009). Combining DNA barcoding and morphological analysis to identify specialist floral parasites (Lepidoptera: Coleophoridae: Momphinae: Mompha). Molecular Ecology Resources, 9(s1), 217-223.

Engelmann JC, Rahmann S, Wolf M, Schultz J, Fritzilas E, Kneitz S, Dandekar T, Muller T (2009) Modelling cross-hybridization on phylogenetic DNA microarrays increases the detection power of closely related species. Molecular Ecology Resources 9: 83-93

Farrington L, MacGillivray P, Faast R, Austin A (2009) Investigating DNA barcoding options for the identification of Caladenia (Orchidaceae) species. Australian Journal of Botany 57: 276-286

Fazekas, A. J., Kesanakurti, P. R., Burgess, K. S., Percy, D. M., Graham, S. W., Barrett, S. C. H., et al. (2009). Are plant species inherently harder to discriminate than animal species using DNA barcoding markers? Molecular Ecology Resources, 9(s1), 130-139.

Feau, N., Vialle, A., Allaire, M., Tanguay, P., Joly, D. L., Frey, P., et al. (2009). Fungal pathogen (mis-) identifications: A case study with DNA barcodes on Melampsora rusts of aspen and white poplar. Mycological Research, 113(6-7), 713-724

Ferri G, Alu M, Corradini B, Beduschi G (2009) Forensic botany: species identification of botanical trace evidence using a multigene barcoding approach. International Journal of Legal Medicine 123: 395-401

Ferri G, Alu M, Corradini B, Licata M, Beduschi G (2009) Species Identification Through DNA “Barcodes”. Genetic Testing and Molecular Biomarkers 13: 421-426

Ferri, E., Barbuto, M., Bain, O., Galimberti, A., Uni, S., Guerrero, R. A., et al. (2009). Integrated taxonomy: traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda). Front Zool, 6(1), 1.

Floyd, R., Wilson, J. J., & Hebert, P. D. N. (2009). DNA Barcodes and Insect Biodiversity. In R. G. Foottit & P. H. Adler (Eds.), Insect Biodiversity: Science and Society (pp. 417-431). Oxford, UK: Blackwell Publishing.

Fontaneto D, Kaya M, Herniou EA, Barraclough TG (2009) Extreme levels of hidden diversity in microscopic animals (Rotifera) revealed by DNA taxonomy. Molecular Phylogenetics and Evolution 53: 182-189

Foottit RG, Lowery DT, Maw HEL, Smirle MJ, Lushai G (2009) Identification, distribution, and molecular characterization of the apple aphids Aphis pomi and Aphis spiraecola (Hemiptera: Aphididae: Aphidinae). Canadian Entomologist 141: 478-495

Foottit, R. G., Maw, H. E. L., Havill, N. P., Ahern, R. G., & Montgomery, M. E. (2009). DNA barcodes to identify species and explore diversity in the Adelgidae (Insecta: Hemiptera: Aphidoidea). Molecular Ecology Resources, 9(s1), 188-195.

Ford CS, Ayres KL, Toomey N, Haider N, Stahl JV, Kelly LJ, Wikstrom N, Hollingsworth PM, Duff RJ, Hoot SB, Cowan RS, Chase MW, Wilkinson MJ (2009) Selection of candidate coding DNA barcoding regions for use on land plants. Botanical Journal of the Linnean Society 159: 1-11

Galvez EJ, Franco-Lara L, Restrepo S, Jimenez P (2009) Search of a “DNA barcode” for identification of species of the genus Fusarium. Phytopathology 99: S39-S39

Gao T, Chen SL (2009) Authentication of the Medicinal Plants in Fabaceae by DNA Barcoding Technique. Planta Medica 75: 417-417

Gao T, Pang XH, Chen SL (2009) Authentication of plants in Astragalus by DNA Barcoding technique. Planta Medica 75: 933-933

Gawor A, Hendrix R, Vences M, Bohme W, Ziegler T (2009) Larval morphology in four species of Hylarana from Vietnam and Thailand with comments on the taxonomy of H. nigrovittata sensu latu (Anura: Ranidae). Zootaxa: 1-25

Gentekaki, E., & Lynn, D. H. (2009). High-level genetic diversity but no population structure inferred from nuclear and mitochondrial markers of the peritrichous ciliate Carchesium polypinum in the Grand River basin (North America). Appl Environ Microbiol, 75(10), 3187-3195.

Gibbs, J. (2009). Integrative taxonomy identifies new (and old) species in the Lasioglossum (Dialictus) tegulare (Robertson) species group (Hymenoptera, Halictidae). Zootaxa, 2032, 1-38.

Gibbs, J. (2009). A new cleptoparasitic Lasioglossum (Hymenoptera, Halictidae) from Africa. Journal of Hymenoptera Research, 18, 74-79.

Gibbs, J., & Sheffield, C. S. (2009). Rapid Range Expansion of the Wool-Carder Bee, Anthidium manicatum (Linnaeus) (Hymenoptera: Megachilidae), in North America. Journal of the Kansas Entomological Society, 82(1), 21-29.

Gibbs, J. J. (2009). New Species in the Lasioglossum petrellum Species Group Identified through an Integrative Taxonomic Approach. The Canadian Entomologist, 141(4), 371-396.

Gilmore, S. R., Grafenhan, T., Louis-Seize, G., & Seifert, K. A. (2009). Multiple copies of cytochrome oxidase 1 in species of the fungal genus Fusarium. Molecular Ecology Resources, 9(s1), 90-98.

Golding, G. B., Hanner, R., & Hebert, P. D. N. (2009). Preface. Molecular Ecology Resources, 9(s1), iv-vi.

Gonzalez MA, Baraloto C, Engel J, Mori SA, Petronelli P, Riera B, Roger A, Thebaud C, Chave J (2009) Identification of Amazonian Trees with DNA Barcodes. PLoS ONE 4

Gossner MM, Hausmann A (2009) DNA barcoding enables the identification of caterpillars feeding on native and alien oak (Lepidoptera: Geometridae). Mitteilungen Muenchener Entomologischen Gesellschaft 99: 135-140

Grant RA, Linse K (2009) Barcoding Antarctic Biodiversity: current status and the CAML initiative, a case study of marine invertebrates. Polar Biology 32: 1629-1637

Gravendeel B, Eurlings M, Heijerman T (2009) Use of DNA barcoding for host plant identification. Entomologische Berichten (Amsterdam) 69: 30-35

Hajibabaei M, Singer G (2009) Googling DNA sequences on the World Wide Web. BMC Bioinformatics 10: S4

Hamelin RC, Feau N, Tsui CK, Kope H, Zeglen S (2009) DNA barcoding of Septoria species from leaf spots and stem cankers of Poplar in British Columbia, Canada to assess risk of spread. Phytopathology 99: S51-S51

Han J, Shi LC, Yao H, Song JY, Xu HX, Sun C, Xie CX, Chen SL (2009) Testing Potential DNA Barcoding Regions in the Labiatae Medicinal Plants. Planta Medica 75: 407-407

Han JP, Shi LC, Li MH, Yao H, Song JY, Xu HX, Sun C, Chen SL (2009) Relationship between DNA Barcoding and Chemical Classification of Salvia L. Medicinal Herbs. Planta Medica 75: 416-417

Han JP, Song JY, Shi LC, Chen J, Qian J, Zhu YJ, Liu C, Yao H, Chen SL (2009) Using DNA barcoding to authentication of Cistanches and its fakements. Planta Medica 75: 936-936

Hanner R (2009) Data Standards for BARCODE Records in INSDC (BRIs).

Hausler, D., O’Brien, S. J., Ryder, O. A., & 58 co-authors including Hebert, P. D. N. (2009). Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species. J Heredity, 100(6), 659-674.

Hausmann A, Hebert PDN, Mitchell A, Rougerie R, Sommerer M, Edwards T, Young CJ (2009) Revision of the Australian Oenochroma vinaria Guenee, 1858 species-complex (Lepidoptera: Geometridae, Oenochrominae): DNA barcoding reveals cryptic diversity and assesses status of type specimen without dissection. Zootaxa: 1-21

Hausmann, A., & Hebert, P. D. N. (2009). Order Lepidoptera, family Geometridae (Part 2): The Geometridae of the UAE revised in the light of mtDNA data. In T. van Harten (Ed.), Arthropod fauna of the UAE 2 (Vol. 2, pp. 468-479). Adu Dhabi, United Arab Emirate: Dar Al Ummah Printing, Publishing, Distribution & Advertising,.

Hausmann, A., Hebert, P. D. N., Mitchell, A., Rougerie, R., Sommerer, M., Edwards, T., et al. (2009). Revision of the Australian Oenochroma vinaria Guenée, 1858 species-complex (Lepidoptera: Geometridae, Oenochrominae): DNA barcoding reveals cryptic diversity and assesses status of type specimen without dissection. Zootaxa, 2239, 1-21.

Hausmann, A., & Parra, L. (2009). An unexpected hotspot of moth biodiversity in Chilean northern Patagonia (Lepidoptera, Geometridae). Zootaxa, 1989, 23-38.

Hausmann, A., Sommerer, M., Rougerie, R., & Hebert, P. D. N. (2009). Hypobapta tachyhalotaria spec. nov. from Tasmania – an example of a new species revealed by DNA barcoding. SPIXIANA, 32(2), 161–166.

Haussermann V, Dawson MN, Forsterra G (2009) First record of the moon jellyfish, Aurelia for Chile (Scyphozoa: Semaeostomeae). Spixiana 32: 3-7

Hebert, P. D., Dewaard, J. R., & Landry, J. F. (2009). DNA barcodes for 1/1000 of the animal kingdom. Biol Lett, 6(3), 359-362.

Hemmerter S, Slapeta J, Beebe NW (2009) Resolving genetic diversity in Australasian Culex mosquitoes: Incongruence between the mitochondrial cytochrome c oxidase I and nuclear acetylcholine esterase 2. Molecular Phylogenetics and Evolution 50: 317-325

Hendrich L, Hawlitschek O, Balke M (2009) The epigean Australasian species of Neobidessodes gen.n. diving beetles-a revision integrating morphology, cybertaxonomy, DNA taxonomy and phylogeny (Coleoptera: Dytiscidae, Bidessini). Zootaxa: 1-41

Hirose M, Hirose E (2009) DNA Barcoding in Photosymbiotic Species of Diplosoma (Ascidiacea: Didemnidae), with the Description of a New Species from the Southern Ryukyus, Japan. Zoological Science 26: 564-568

Hogg ID, Smith BJ, Banks JC, Dewaard JR, Hebert PDN (2009) Testing use of mitochondrial COI sequences for the identification and phylogenetic analysis of New Zealand caddisflies (Trichoptera). New Zealand Journal of Marine and Freshwater Research 43: 1137-1146

Hollingsworth ML, Clark AA, Forrest LL, Richardson J, Pennington RT, Long DG, Cowan RS, Chase MW, Gaudeul M, Hollingsworth PM (2009) Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants. Molecular Ecology Resources 9: 439-457

Hollingsworth, P. M., Forrest, L. L., Spouge, J. L., Hajibabaei, M., Ratnasingham, S., van der Bank, M., et al. (2009). A DNA barcode for land plants. Proceedings of the National Academy of Sciences, 106(31), 12794–12797.

Holmes, B. H., Steinke, D., & Ward, R. D. (2009). Identification of shark and ray fins using DNA barcoding. Fisheries Research, 95(2-3), 280-288.

Hou Z-e, Li Z, Li S-q (2009) Identifying Chinese species of Gammarus (Crustacea : Amphipoda) using DNA barcoding. Current Zoology 55: 158-164

Huemer, P., & Hausmann, A. (2009). A new expanded revision of the European high mountain Sciadia tenebraria species group (Lepidoptera: Geometridae). Zootaxa, 2117, 1-30.

Humble LM, deWaard JR, Quinn M (2009) Delayed recognition of the European poplar shoot borer Gypsonoma aceriana (Duponchel) (Lepidoptera: Tortricidae), in Canada. Journal of the Entomological Society of British Columbia 106: 61-70

Ilmonen J, Adler PH, Malmqvist B, Cywinska A (2009) The Simulium vernum group (Diptera: Simuliidae) in Europe: multiple character sets for assessing species status. Zoological Journal of the Linnean Society 156: 847-863

Ivanova, N. V., Borisenko, A. V., & Hebert, P. D. N. (2009). Express barcodes: racing from specimen to identification. Molecular Ecology Resources, 9(s1), 35-41.

Jakupciak, J. P., & Colwell, R. R. (2009). Biological agent detection technologies. Molecular Ecology Resources, 9(s1), 51-57.

Jansen G, Savolainen R, Vepsalainen K (2009) DNA barcoding as a heuristic tool for classifying undescribed Nearctic Myrmica ants (Hymenoptera: Formicidae). Zoologica Scripta 38: 527-536

Janzen, D. H., Hallwachs, W., Blandin, P., Burns, J. M., Cadiou, J.-M., Chacon, I., et al. (2009). Integration of DNA barcoding into an ongoing inventory of complex tropical biodiversity. Molecular Ecology Resources, 9(s1), 1-26.

Jurado-Rivera JA, Vogler AP, Reid CAM, Petitpierre E, Gomez-Zurita J (2009) DNA barcoding insect-host plant associations. Proc Roy Soc Lond B 276: 639 – 648

Kerr, K., Birks, S., Kalyakin, M., Red’kin, Y., Koblik, E., & Hebert, P. D. N. (2009). Filling the gap – COI barcode resolution in eastern Palearctic birds. Frontiers in Zoology, 6(1), 29.

Kartavtsev YP, Sharina SN, Goto T, Balanov AA, Hanzawa N (2009) Sequence Diversity at Cytochrome Oxidase 1 (Co-1) Gene among Sculpins (Scorpaeniformes, Cottidae) and some other Scorpionfish of Russia Far East with Phylogenetic and Taxonomic Insights. Genes & Genomics 31: 183-197

Kartavtsev YP, Sharina SN, Goto T, Rutenko OA, Zemnukhov VV, Semenchenko AA, Pitruk DL, Hanzawa N (2009) Molecular phylogenetics of pricklebacks and other percoid fishes from the Sea of Japan. Aquatic Biology 8: 95-103

Kemppainen P, Panova M, Hollander J, Johannesson K (2009) Complete lack of mitochondrial divergence between two species of NE Atlantic marine intertidal gastropods. Journal of Evolutionary Biology 22: 2000-2011

Kent RJ (2009) Molecular methods for arthropod bloodmeal identification and applications to ecological and vector-borne disease studies. Molecular Ecology Resources 9: 4-18

Kerr K, Lijtmaer D, Barreira A, Hebert P, Tubaro P (2009) Probing evolutionary patterns in Neotropical birds through DNA barcodes. PLoS ONE 4: e4379

Kerr, K. C. R., Lijtmaer, D. A., Barreira, A. S., Hebert, P. D. N., & Tubaro, P. L. (2009). Probing Evolutionary Patterns in Neotropical Birds through DNA Barcodes. PLoS ONE, 4(2), e4379.

Kochzius M (2009) Trends in Fishery Genetics. Future of Fisheries Science in North America 31: 453-493

Kress, W. J., Erickson, D. L., Jones, F. A., Swenson, N. G., Perez, R., Sanjur, O., et al. (2009). Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama. Proc Natl Acad Sci U S A, 106(44), 18621-18626.

Krueger M, Stockinger H, Krueger C, Schuessler A (2009) DNA-based species level detection of Glomeromycota: one PCR primer set for all arbuscular mycorrhizal fungi. New Phytologist 183: 212-223

Kuksa P, Pavlovic V (2009) Efficient alignment-free DNA barcode analytics. BMC Bioinformatics 10

Lukhtanov, V. A., Sourakov, A., Zakharov, E. V., & Hebert, P. D. N. (2009). DNA barcoding Central Asian butterflies: increasing geographical dimension does not significantly reduce the success of species identification. Molecular Ecology Resources, 9(5), 1302-1310.

Lynn, D. H. (2009). Operational Approaches to Species Identification in Microbial Eukaryotes – And Now DNA Barcodes. In L. Calabi (Ed.), Il Futuro di Darwin. La specie (pp. 45-63). Torino: UTET Press.

Marra, P. P., Dove, C. J., Dolbeer, R., Dahlan, N. F., Heacker, M., Whatton, J. F., et al. (2009). Migratory Canada geese cause crash of US Airways Flight 1549. Frontiers in Ecology and the Environment, 7(6), 297-301.

McDevit, D. C., & Saunders, G. W. (2009). On the utility of DNA barcoding for species differentiation among brown macroalgae (Phaeophyceae) including a novel extraction protocol. Phycological Research, 57(2), 131-141.

Meier, R., Zhang, G., & Ali, F. (2009). The Use of Mean Instead of Smallest Interspecific Distances Exaggerates the Size of the “Barcoding Gap” and Leads to Misidentification. Systematic Biology, 57(5), 809-813.

Meiklejohn, K. A., Wallman, J. F., & Dowton, M. (2009). DNA-based identification of forensically important Australian Sarcophagidae (Diptera) International Journal of Legal Medicine, Online Early.

Moniz, M. B. J., & Kaczmarska, I. (2009). Barcoding diatoms: Is there a good marker? Molecular Ecology Resources, 9(s1), 65-74.

Moszczynska, A., Locke, S. A., McLaughlin, J. D., Marcogliese, D. J., & Crease, T. J. (2009). Development of primers for the mitochondrial cytochrome c oxidase I gene in digenetic trematodes (Platyhelminthes) illustrates the challenge of barcoding parasitic helminths. Molecular Ecology Resources, 9(s1), 75-82.

Newmaster, S. G., Murugesan, M., Ragupathy, S., Nallasamy, N., & Balasubramaniam, V. (2009). Ethnobotany Genomics study reveals three new species from the Velliangiri Holy Hills in the Nilgiri Biosphere Reserve, Western Ghats, India. Ethnobotany, 21, 2-24.

Newmaster, S. G., & Ragupathy, S. (2009). Ethnobotany genomics – use of DNA barcoding to explore cryptic diversity in economically important plants. Indian Journal of Science and Technology, 2 (5), 2-8.

Newmaster, S. G., & Ragupathy, S. (2009). Testing plant barcoding in a sister species complex of pantropical Acacia (Mimosoideae, Fabaceae). Molecular Ecology Resources, 9(s1), 172-180.

Newmaster, S. G., Ragupathy, S., & Janovec, J. (2009). A botanical renaissance: state-of-the-art DNA bar coding facilitates an Automated Identification Technology system for plants. International Journal of Computer Applications in Technology, 35(1), 50-60.

Packer, L., Gibbs, J., Sheffield, C., & Hanner, R. (2009). DNA barcoding and the mediocrity of morphology. Molecular Ecology Resources, 9(s1), 42-50.

Packer, L., Grixti, J. C., Roughley, R. E., & Hanner, R. (2009). The status of taxonomy in Canada and the impact of DNA barcoding Canadian Journal of Zoology, 87(12), 1097-1110.

Packer, L., Sheffield, C. S., Gibbs, J., de Silva, N., Best, L. R., Ascher, J., et al. (2009). The campaign to barcode the bees of the world: progress, problems, prognosis. In C.L. Yurrita (Ed.) Memorias VI Congreso Mesoamericano sobre Abejas Nativas (pp. 178–180). Antigua, Guatemala.

Pagès, N., Muñoz-Muñoz, F., Talavera, S., Sarto, V., Lorca, C., & Núñez, J. I. (2009). Identification of cryptic species of Culicoides (Diptera: Ceratopogonidae) in the subgenus Culicoides and development of species-specific PCR assays based on barcode regions. Veterinary Parasitology, 165(3-4), 298-310.

Radulovici, A. E., Sainte-Marie, B., & Dufresne, F. (2009). DNA barcoding of marine crustaceans from the Estuary and Gulf of St Lawrence: a regional-scale approach. Molecular Ecology Resources, 9(s1), 181-187.

Ragupathy, S., Newmaster, S. G., Murugesan, M., & Balasubramaniam, V. (2009). DNA barcoding discriminates a new cryptic grass species revealed in an ethnobotany study by the hill tribes of the Western Ghats in southern India. Molecular Ecology Resources, 9(s1), 164-171.

Rasmussen, R. S., Morrissey, M. T., & Hebert, P. D. N. (2009). DNA barcoding of commercially important salmon and trout species (Oncorhynchus and Salmo) from North America. J Agric Food Chem, 57(18), 8379-8385.

Regier, J. C., Zwick, A., Cummings, M. P., Kawahara, A. Y., Cho, S., Weller, S., et al. (2009). Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study. BMC Evol Biol, 9, 280.

Rivera, J., & Currie, D. C. (2009). Identification of Nearctic black flies using DNA barcodes (Diptera: Simuliidae). Molecular Ecology Resources, 9(s1), 224-236.

Robinson, E. A., Blagoev, G. A., Hebert, P. D. N., & Adamowicz, S. J. (2009). Prospects for using DNA barcoding to identify spiders in species-rich genera. ZooKeys, 16, 27-46.

Rougerie, R., Decaëns, T., Deharveng, L., Porco, D., James, S. W., Chang, C.-H., et al. (2009). DNA barcodes for soil animal taxonomy. Pesquisa Agropecuária Brasileira, 44(8), 789-801.

Santamaria, M., Vicario, S., Pappada, G., Scioscia, G., Scazzocchio, C., & Saccone, C. (2009). Towards barcode markers in Fungi: an intron map of Ascomycota mitochondria. BMC Bioinformatics, 10(Suppl 6), S15.

Saunders, G. W. (2009). Routine DNA barcoding of Canadian Gracilariales (Rhodophyta) reveals the invasive species Gracilaria vermiculophylla in British Columbia. Molecular Ecology Resources, 9(s1), 140-150.

Seberg, O., & Petersen, G. (2009). How Many Loci Does it Take to DNA Barcode a Crocus? PLoS ONE, 4(2), e4598.

Segade, P., Kher, C. P., Lynn, D. H., & Iglesias, R. (2009). Morphological and molecular characterization of renal ciliates infecting farmed snails in Spain. Parasitology, 136(7), 771-782.

Seifert, K. A. (2009). Progress towards DNA barcoding of fungi. Molecular Ecology Resources, 9(s1), 83-89.

Sheffield, C. S., Hebert, P. D. N., Kevan, P. G., & Packer, L. (2009). DNA barcoding a regional bee (Hymenoptera: Apoidea) fauna and its potential for ecological studies. Molecular Ecology Resources, 9(s1), 196-207.

Shneyer, V. S. (2009). DNA barcoding of animal and plant species as an approach for their molecular identification and describing of diversity. Zh Obshch Biol, 70(4), 296-315.

Singer, G., & Hajibabaei, M. (2009). web-based molecular biodiversity analysis. BMC Bioinformatics, 10(Suppl 6), S14.

Smith, M. A., Fernandez-Triana, J., Roughley, R., & Hebert, P. D. N. (2009). DNA barcode accumulation curves for understudied taxa and areas. Molecular Ecology Resources, 9(s1), 208-216.

Smith, M. A., & Fisher, B. (2009). Invasions, DNA barcodes, and rapid biodiversity assessment using ants of Mauritius. Frontiers in Zoology, 6(1), 31.

Starr, J. R., Naczi, R. F. C., & Chouinard, B. N. (2009). Plant DNA barcodes and species resolution in sedges (Carex, Cyperaceae). Molecular Ecology Resources, 9(s1), 151-163.

Steinke, D., Hanner, R., & Hebert, P. D. N. (2009). Rapid high-quality imaging of fishes using a flat-bed scanner. Ichthyol Res, 56(2), 210-211.

Steinke, D., Zemlak, T. S., Boutillier, J. A., & Hebert, P. D. N. (2009). DNA barcoding of Pacific Canada’s fishes Marine Biology, 156(12), 2641-2647.

Steinke, D., Zemlak, T. S., & Hebert, P. D. N. (2009). Barcoding Nemo: DNA-Based Identifications for the Ornamental Fish Trade. PLoS ONE, 4(7), e6300.

ten Hagen, W., & Schurian, K. G. (2009). Polyommatus (Aricia) crassipunctus varicolor ssp. n., a new subspecies from Iran (Lepidoptera: Lycaenidae). Nachrichten des Entomologischen Vereins Apollo, 30(1/2), 9-17.

Valade, R., Kenis, M., Hernandez-Lopez, A., Augustin, S., Mari Mena, N., Magnoux, E., et al. (2009). Mitochondrial and microsatellite DNA markers reveal a Balkan origin for the highly invasive horse-chestnut leaf miner Cameraria ohridella (Lepidoptera, Gracillariidae). Molecular Ecology, 18(16), 3458 – 3470.

Valdez-Moreno, M., Ivanova, N. V., Elías-Gutiérrez, M., Contreras-Balderas, S., & Hebert, P. D. N. (2009). Probing diversity in freshwater fishes from Mexico and Guatemala with DNA barcodes. Journal of Fish Biology, 74(2), 377-402.

Valentini, A., Pompanon, F., & Taberlet, P. (2009). DNA barcoding for ecologists. Trends in Ecology and Evolution, 24(2), 110-117

Vialle, A., Feau, N., Allaire, M., Didukh, M., Martin, F., Moncalvo, J.-M., et al. (2009). Evaluation of mitochondrial genes as DNA barcode for Basidiomycota. Molecular Ecology Resources, 9(s1), 99-113.

Victor, B. C., Hanner, R., Shivji, M., Hyde, J., & Caldow, C. (2009). Identification of the larval and juvenile stages of the Cubera Snapper, Lutjanus cyanopterus, using DNA barcoding. Zootaxa(2215), 24-36.

Ward, R. D., Hanner, R., & Hebert, P. D. N. (2009). The campaign to DNA barcode all fishes, FISH-BOL. Journal of Fish Biology, 74(2), 329-356.

Wilson, John J., Floyd, R., Hanner, R. H., & Castle, D. (2009). Letters to the Editor. Isis, 100(1), 117-117.

Wong, E. H.-K., Shivji, M. S., & Hanner, R. H. (2009). Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach. Molecular Ecology Resources, 9(s1), 243-256.

Xu, S., Hebert, P. D. N., Kotov, A. A., & Cristescu, M. E. (2009). The noncosmopolitanism paradigm of freshwater zooplankton: insights from the global phylogeography of the predatory cladoceran Polyphemus pediculus (Linnaeus, 1761) (Crustacea, Onychopoda). Molecular Ecology, 18(24), 5161-5179.

Zahariev, M., Dahl, V., Chen, W., & Levesque, C. A. (2009). Efficient algorithms for the discovery of DNA oligonucleotide barcodes from sequence databases. Molecular Ecology Resources, 9(s1), 58-64.

Zemlak, T. S., Ward, R. D., Connell, A. D., Holmes, B. H., & Hebert, P. D. N. (2009). DNA barcoding reveals overlooked marine fishes. Molecular Ecology Resources, 9(s1), 237-242.

Zhou, X., Adamowicz, S., Jacobus, L., DeWalt, R., & Hebert, P. D. N. (2009). Towards a comprehensive barcode library for arctic life-Ephemeroptera, Plecoptera, and Trichoptera of Churchill, Manitoba, Canada. Frontiers in Zoology, 6(1), 30.



Albu, M., Min, X. J., Hickey, D., & Golding, B. (2008). Uncorrected nucleotide bias in mtDNA can mimic the effects of positive Darwinian selection. Mol Biol Evol, 25(12), 2521-2524.

Ball, S. L., & Armstrong, K. F. (2008). Rapid, one-step DNA extraction for insect pest identification by using DNA barcodes. J Econ Entomol, 101(2), 523-532.

Bergeron, M. J., Hamelin, R. C., Leal, I., Davis, C., & de Groot, P. (2008). First Report of Amylostereum areolatum, the Fungal Symbiont of Sirex noctilio, on Pinus spp. in Canada. Plant Disease, 92(7), 1138-1138.

Bond, J. E., & Stockman, A. K. (2008). An integrative method for delimiting cohesion species: finding the population-species interface in a group of californian trapdoor spiders with extreme genetic divergence and geographic structuring. Syst Biol, 57(4), 628-646.

Borisenko, A. V., Lim, B. K., Ivanova, N. V., Hanner, R. H., & Hebert, P. D. N. (2008). DNA barcoding in surveys of small mammal communities: a field study in Suriname. Molecular Ecology Resources, 8(3), 471-479.

Bourlat, S. J., Nakano, H., Kerman, M., Telford, M. J., Thorndyke, M. C., & Obst, M. (2008). Feeding ecology of Xenoturbella bocki (phylum Xenoturbellida) revealed by genetic barcoding. Molecular Ecology Resources, 8(1), 18-22.

Bravo, J. P., Silva, J. L., Munhoz, R. E., & Fernandez, M. A. (2008). DNA barcode information for the sugar cane moth borer Diatraea saccharalis. Genet Mol Res, 7(3), 741-748.

Burns, J. M., Janzen, D. H., Hajibabaei, M., Hallwachs, W., & Hebert, P. D. N. (2008). DNA barcodes and cryptic species of skipper butterflies in the genus Perichares in Area de Conservacion Guanacaste, Costa Rica. Proc Natl Acad Sci U S A, 105(17), 6350-6355.

Chantangsi, C., & Lynn, D. H. (2008). Phylogenetic relationships within the genus Tetrahymena inferred from the cytochrome c oxidase subunit 1 and the small subunit ribosomal RNA genes. Mol Phylogenet Evol, 49(3), 979-987.

Cheung, F., Win, J., Lang, J. M., Hamilton, J., Vuong, H., Leach, J. E., et al. (2008). Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches. BMC Genomics, 9, 542.

Chown, S. L., Sinclair, B. J., & Jansen van Vuuren, B. (2008). DNA barcoding and the documentation of alien species establishment on sub-Antarctic Marion Island. Polar Biology.

Clare, E. L., Kerr, K. C., von Konigslow, T. E., Wilson, J. J., & Hebert, P. D. (2008). Diagnosing mitochondrial DNA diversity: applications of a sentinel gene approach. J Mol Evol, 66(4), 362-367.

Clayden, S. L., & Saunders, G. W. (2008). Resurrecting the red algal genus Grania within the order Acrochaetiales (Florideophyceae, Rhodophyta). European Journal of Phycology, 43(2), 151 – 160.

Day, J. C., Goodall, T. I., & Post, R. J. (2008). Confirmation of the species status of the blackfly Simulium galeratum in Britain using molecular taxonomy. Med Vet Entomol, 22(1), 55-61.

De Astarloa, J. M. D., Mabragana, E., Hanner, R., & Figueroa, D. E. (2008). Morphological and molecular evidence for a new species of longnose skate (Rajiformes: Rajidae: Dipturus) from Argentinean waters based on DNA barcoding. Zootaxa, 1921, 35-46.

de Cock, A. W., Levesque, C. A., Melero-Vara, J. M., Serrano, Y., Guirado, M. L., & Gomez, J. (2008). Pythium solare sp. nov., a new pathogen of green beans in Spain. Mycol Res, 112(Pt 9), 1115-1121.

Decaens, T., & Rougerie, R. (2008). Descriptions of two new species of Hemileucinae (Lepidoptera: Saturniidae) from the region of Muzo in Colombia—evidence from morphology and DNA barcodes. Zootaxa, 1944, 34-52.

Derycke, S., Fonseca, G., Vierstraete, A., Vanfleteren, J., Vincx, M., & Moens, T. (2008). Disentangling taxonomy within the Rhabditis (Pellioditis) marina (Nematoda, Rhabditidae) species complex using molecular and morhological tools. Zoological Journal of the Linnean Society, 152(1), 1-15.

deWaard, J. R., Ivanova, N. V., Hajibabaei, M., & Hebert, P. D. N. (2008). Assembling DNA barcodes: analytical protocols. In C. Martin (Ed.), Methods in Molecular Biology: Environmental Genetics (pp. 275-293). Totowa: Humana Press.

Elias-Gutierrez, M., Jeronimo, F. M., Ivanova, N. V., Valdez-Moreno, M., & Hebert, P. D. N. (2008). DNA barcodes for Cladocera and Copepoda from Mexico and Guatemala, highlights and new discoveries. Zootaxa, 1839, 1-42.

Evans, B. J., Carter, T. F., Tobias, M. L., Kelley, D. B., Hanner, R., & Tinsley, R. C. (2008). A new species of clawed frog (genus Xenopus) from the Itombwe Massif, Democratic Republic of the Congo: implications for DNA barcodes and biodiversity conservation. Zootaxa, 1780, 55-68

Fazekas, A. J., Burgess, K. S., Kesanakurti, P. R., Graham, S. W., Newmaster, S. G., Husband, B. C., et al. (2008). Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS ONE, 3(7), e2802.

Field, D., Morrison, N., Glockner, F. O., Kottmann, R., Cochrane, G., Vaughan, R., et al. (2008). Working together to put molecules on the map. Nature, 453, 978.

Fisher, B. L., & Smith, M. A. (2008). A revision of Malagasy species of Anochetus mayr and Odontomachus latreille (Hymenoptera: Formicidae). PLoS ONE, 3(5), e1787.

Foottit, R. G., Maw, H. E. L., Von Dohlen, C. D., & Hebert, P. D. N. (2008). Species identification of aphids (Insecta: Hemiptera: Aphididae) through DNA barcodes. Molecular Ecology Resources, 8(6), 1189-1201.

Frezal, L., & Leblois, R. (2008). Four years of DNA barcoding: Current advances and prospects. Infect Genet Evol, 8(5), 727-736.

Garros, C., Ngugi, N., Githeko, A. E., Tuno, N., & Yan, G. (2008). Gut content identification of larvae of the Anopheles gambiae complex in western Kenya using a barcoding approach. Molecular Ecology Resources, 8(3), 512-518.

Hamilton, A., & Wheeler, Q. D. (2008). Taxonomy and why history of science matters for science: a case study. Isis, 99(2), 331-340.

Hamilton, P. B., Adams, E. R., Malele, I. I., & Gibson, W. C. (2008). A novel, high-throughput technique for species identification reveals a new species of tsetse-transmitted trypanosome related to the Trypanosoma brucei subgenus, Trypanozoon. Infect Genet Evol, 8(1), 26-33.

Harris, T. D., Buzby, P. R., Babcock, H., Beer, E., Bowers, J., Braslavsky, I., et al. (2008). Single-molecule DNA sequencing of a viral genome. Science, 320(5872), 106-109.

Hollingsworth, P. M. (2008). DNA barcoding plants in biodiversity hot spots: progress and outstanding questions. Heredity, 101(1), 1-2.

Huang, D., Meier, R., Todd, P. A., & Chou, L. M. (2008). Slow mitochondrial COI sequence evolution at the base of the metazoan tree and its implications for DNA barcoding. J Mol Evol, 66(2), 167-174.

Hubert, N., Hanner, R., Holm, E., Mandrak, N. E., Taylor, E., Burridge, M., et al. (2008). Identifying Canadian Freshwater Fishes through DNA Barcodes. PLoS ONE, 3(6), e2490

Hunter, S. J., Goodall, T. I., Walsh, K. A., Owen, R., & Day, J. C. (2008). Nondestructive DNA extraction from blackflies (Diptera: Simuliidae): retaining voucher specimens for DNA barcoding projects. Molecular Ecology Resources, 8(1), 56-61.

Ivanova, N. V., Fazekas, A. J., & Hebert, P. D. N. (2008). Semi-automated, Membrane-Based Protocol for DNA Isolation from Plants. Plant Molecular Biology Reporter, 26(3), 186-198.

Johnson, S. B., Warén, A., & Vrijenhoek, R. C. (2008). DNA Barcoding of Lepetodrilus Limpets Reveals Cryptic Species. Journal of Shellfish Research, 27(1), 43-51.

Kaczmarska, I., Reid, C., Martin, J. L., & Moniz, M. B. J. (2008). Morphological, biological, and molecular characteristics of the diatom Pseudo-nitzschia delicatissima from the Canadian Maritimes Botany, 86(7), 763-772.

Kane, R. A., Stothard, J. R., Emery, A. M., & Rollinson, D. (2008). Molecular characterization of freshwater snails in the genus Bulinus: a role for barcodes? Parasit Vectors, 1(1), 15.

Köhler, F., Schultze, K.-J., Günther, R., & Plötner, J. (2008). On the genetic diversity in the mitochondrial 12S rRNA gene of Platymantis frogs from Western New Guinea (Anura: Ceratobatrachidae). Journal of Zoological Systematics and Evolutionary Research, 46(2), 177-185.

Kress, W. J., & Erickson, D. L. (2008). DNA barcodes: Genes, genomics, and bioinformatics. Proc Natl Acad Sci U S A.

Kucera, H., & Saunders, G. W. (2008). Assigning morphological variants of Fucus (Fucales, Phaeophyceae) in Canadian waters to recognized species using DNA barcoding. Botany, 86(9), 1065-1079.

Kumar, N. P., Rajavel, A. R., & Jambulingam, P. (2008). Application of PDF417 symbology for ‘DNA Barcoding’. Comput Methods Programs Biomed, 90(2), 187-189.

Lahaye, R., van der Bank, M., Bogarin, D., Warner, J., Pupulin, F., Gigot, G., et al. (2008). DNA barcoding the floras of biodiversity hotspots. Proc Natl Acad Sci U S A, 105(8), 2923-2928.

Li, M., Wunder, J., Bissoli, G., Scarponi, E., Gazzani, S., Barbaro, E., et al. (2008). Development of COS genes as universally amplifiable markers for phylogenetic reconstructions of closely related plant species. Cladistics, 24(5), 727-745.

Maclean, N. (2008). Editorial for Molecular and Cell Science JFB. Journal of Fish Biology, 73(5), 1091-1095.

Meusnier, I., Singer, G. A., Landry, J. F., Hickey, D. A., Hebert, P. D., & Hajibabaei, M. (2008). A universal DNA mini-barcode for biodiversity analysis. BMC Genomics, 9, 214.

Meyer, M., Stenzel, U., & Hofreiter, M. (2008). Parallel tagged sequencing on the 454 platform. Nat Protoc, 3(2), 267-278.

Moncalvo, J. M., & Buchanan, P. K. (2008). Molecular evidence for long distance dispersal across the Southern Hemisphere in the Ganoderma applanatum-australe species complex (Basidiomycota). Mycol Res, 112(Pt 4), 425-436.

Mouhamadou, B., Carriconde, F., Gryta, H., Jargeat, P., Manzi, S., & Gardes, M. (2008). Molecular evolution of mitochondrial ribosomal DNA in the fungal genus Tricholoma: barcoding implications. Fungal Genet Biol, 45(9), 1219-1226.

Moura, C. J., Harris, D. J., Cunha, M. R., & Rogers, A. D. (2008). DNA barcoding reveals cryptic diversity in marine hydroids (Cnidaria, Hydrozoa) from coastal and deep-sea environments. Zoologica Scripta, 37(1), 93-108.

Newmaster, S. G., Balasubramaniam, V., Murugesan, M., & Ragupathy, S. (2008). Tripogon cope (Poaceae: Chloridoideae), a New Species Supported by Morphometric Analysis and a Synopsis of Tripogon in India. Systematic Botany, 33(4), 695-701.

Newmaster, S. G., Fazekas, A. J., Steeves, R. A. D., & Janovec, J. (2008). Testing candidate plant barcode regions in the Myristicaceae. Molecular Ecology Resources, 8(3), 480-490.

Nguyen, H. D. T., & Seifert, K. A. (2008). Description and DNA barcoding of three new species of Leohumicola from South Africa and the United States. Persoonia, 21, 57-69.

Oliver, K. L., Hamelin, R. C., & Hintz, W. E. (2008). Effects of transgenic hybrid aspen overexpressing polyphenol oxidase on rhizosphere diversity. Appl Environ Microbiol, 74(17), 5340-5348.

Papadopoulou, A., Bergsten, J., Fujisawa, T., Monaghan, M. T., Barraclough, T. G., & Vogler, A. P. (2008). Speciation and DNA barcodes: testing the effects of dispersal on the formation of discrete sequence clusters. Philos Trans R Soc Lond B Biol Sci, 363(1506), 2987-2996.

Porter, T. M., Schadt, C. W., Rizvi, L., Martin, A. P., Schmidt, S. K., Scott-Denton, L., et al. (2008). Widespread occurrence and phylogenetic placement of a soil clone group adds a prominent new branch to the fungal tree of life. Molecular Phylogenetics and Evolution, 46(2), 635-644.

Porter, T. M., Skillman, J. E., & Moncalvo, J.-M. (2008). Fruiting body and soil rDNA sampling detects complementary assemblage of Agaricomycotina (Basidiomycota, Fungi) in a hemlock-dominated forest plot in southern Ontario. Molecular Ecology, 17(13), 3037-3050.

Rach, J., Desalle, R., Sarkar, I. N., Schierwater, B., & Hadrys, H. (2008). Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata. Proc Biol Sci, 275(1632), 237-247.

Robideau, G. P., Caruso, F. L., Oudemans, P. V., McManus, P. S., Renaud, M. A., Auclair, M. E., et al. (2008). Detection of cranberry fruit rot fungi using DNA array hybridization. Canadian Journal of Plant Pathology 30, 226-240.

Rock, J., Costa, F. O., Hutchinson, W., Walker, D., & Carvalho, G. R. (2008). DNA barcoding of fish of the Antarctic Scotia Sea indicate priority groups for taxonomic and systematics focus. Antarctic Science, 20(3), 253-262.

Ross, H. A., Murugan, S., & Li, W. L. (2008). Testing the reliability of genetic methods of species identification via simulation. Syst Biol, 57(2), 216-230.

Saunders, G. W. (2008). A DNA barcode examination of the red algal family Dumontiaceae in Canadian waters reveals substantial cryptic species diversity. 1. The foliose Dilsea–Neodilsea complex and Weeksia Botany, 86(7), 773-789.

Schmidt, B. C., & Sperling, F. A. H. (2008). Widespread decoupling of mtDNA variation and species integrity in Grammia tiger moths (Lepidoptera: Noctuidae). Systematic Entomology, 33(4), 613-634.

Schmidt, S. K., Wilson, K. L., Meyer, A. F., Porter, T. M., Schadt, C. W., & Moncalvo, J. M. (2008). The missing fungi – New insights from culture-independent molecular studies of soil. In K. Zengler (Ed.), Acessing Uncultivated Microorganisms (pp. 55-66). Washington, DC: American Society for Microbiology Press.

Seifert, K. A. (2008). Integrating DNA barcoding into the mycological sciences. Persoonia, 21, 162-166.

Sinclair, C. S., & Gresens, S. E. (2008). Discrimination of Cricotopus species (Diptera: Chironomidae) by DNA barcoding. Bull Entomol Res, 1-9.

Smith, M. A. (2008). Using DNA barcodes to assess identity and diversity of Dendropsophus minutus: Failure? Zootaxa, 1691, 67-68.

Smith, M. A., Poyarkov, N. A., & Hebert, P. D. N. (2008). CO1 DNA barcoding amphibians: take the chance, meet the challenge. Molecular Ecology Resources, 8(2), 235–246.

Smith, M. A., Rodriguez, J. J., Whitfield, J. B., Deans, A. R., Janzen, D. H., Hallwachs, W., et al. (2008). Extreme diversity of tropical parasitoid wasps exposed by iterative integration of natural history, DNA barcoding, morphology, and collections. Proc Natl Acad Sci U S A, 105(34), 12359-12364.

Smith, P. J., McVeagh, S. M., & Steinke, D. (2008). DNA barcoding for the identification of smoked fish products. Journal of Fish Biology, 72(2), 464-471.

Smith, P. J., Steinke, D., Mcveagh, S. M., Stewart, A. L., Struthers, C. D., & Roberts, C. D. (2008). Molecular analysis of Southern Ocean skates (Bathyraja) reveals a new species of Antarctic skate. Journal of Fish Biology, 73(5), 1170-1182.

Song, H., Buhay, J. E., Whiting, M. F., & Crandall, K. A. (2008). Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified. Proc Natl Acad Sci U S A, 105(36), 13486-13491.

Stahls, G., & Savolainen, E. (2008). MtDNA COI barcodes reveal cryptic diversity in the Baetis vernus group (Ephemeroptera, Baetidae). Mol Phylogenet Evol, 46(1), 82-87.

Steeves, R., Nazari, V., Landry, J.-F., & Lacroix, C. R. (2008). Predispersal seed predation by a coleophorid on the threatened Gulf of St. Lawrence aster. The Canadian Entomologist, 140(3), 297-305.

Stoeckle, M. Y., & Hebert, P. D. N. (2008). Bar Code of Life: DNA Tags Help Classify Animals. Scientific American, 299(4), 66-71.

Swartz, E. R., Mwale, M., & Hanner, R. (2008). A role for barcoding in the study of African fish diversity and conservation : review article. South African Journal of Science, 104(7 & 8 ), 293 – 298.

Tavares, E. S., & Baker, A. J. (2008). Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds. BMC Evol Biol, 8, 81.

Tedersoo, L., Jairus, T., Horton, B. M., Abarenkov, K., Suvi, T., Saar, I., et al. (2008). Strong host preference of ectomycorrhizal fungi in a Tasmanian wet sclerophyll forest as revealed by DNA barcoding and taxon-specific primers. New Phytol, 180(2), 479-490.

Teletchea, F., Bernillon, J., Duffraisse, M., Laudet, V., & Hänni, C. (2008). Molecular identification of vertebrate species by oligonucleotide microarray in food and forensic samples. Journal of Applied Ecology, 45(3), 967-975.

Vaglia, T., Haxaire, J., Kitching, I. J., Meusnier, I., & Rougerie, R. (2008). Morphology and DNA barcoding reveal three cryptic species within the Xylophanes neoptolemus and loelia species-groups (Lepidoptera: Sphingidae). Zootaxa, 1923, 18-36.

Valkiunas, G., Atkinson, C. T., Bensch, S., Sehgal, R. N., & Ricklefs, R. E. (2008). Parasite misidentifications in GenBank: how to minimize their number? Trends Parasitol, 24(6), 247-248.

Victor, B. C. (2008). Redescription of Coryphopterus tortugae (Jordan) and a new allied species Coryphopterus bol (Perciformes: Gobiidae: Gobiinae) from the tropical western Atlantic Ocean. Journal of the Ocean Science Foundation, 1, 1-19.

Ward, R. D., Costa, F. O., Holmes, B. H., & Steinke, D. (2008). DNA barcoding shared fish species from the North Atlantic and Australasia: minimal divergence for most taxa but a likely two species for both Zeus faber (John dory) and Lepidopus caudatus (silver scabbardfish). Aquatic Biology, 3, 71-78.

Ward, R. D., Holmes, B. H., William, T. W., & Last, P. R. (2008). DNA barcoding Australasian chondrichthyans: results and potential uses in conservation. Marine and Freshwater Research 59(1), 57-71.

Ward, R. D., Holmes, B. H., & Yearsley, G. K. (2008). DNA barcoding reveals a likely second species of Asian sea bass (barramundi) (Lates calcarifer). Journal of Fish Biology, 72(2), 458–463.

Waugh, J., Huynen, L., Millar, C., & Lambert, D. (2008). DNA barcoding of animal species-response to DeSalle. Bioessays, 30(1), 92-93.

Wheat, C. W., & Watt, W. B. (2008). A mitochondrial-DNA-based phylogeny for some evolutionary-genetic model species of Colias butterflies (Lepidoptera, Pieridae). Mol Phylogenet Evol, 47(3), 893-902.

Wheeler, Q. D. (2008). Undisciplined thinking: morphology and Hennig’s unfinished revolution. Systematic Entomology, 33(1).

Wong, E. H.-K., & Hanner, R. H. (2008). DNA barcoding detects market substitution in North American seafood Food Research International, 41(8), 828-837.

Yancy, H. F., Zemlak, T. S., Mason, J. A., Washington, J. D., Tenge, B. J., Nguyen, N. L., et al. (2008). Potential use of DNA barcodes in regulatory science: applications of the Regulatory Fish Encyclopedia. J Food Prot, 71(1), 210-217.

Yassin, A., Capy, P., Madi-Ravazzi, L., Ogereau, D., & David, J. R. (2008). DNA barcode discovers two cryptic species and two geographical radiations in the invasive drosophilid Zaprionus indianus. Molecular Ecology Resources, 8(8), 491-501.

Zeng, J. S., & De Hoog, G. S. (2008). Exophiala spinifera and its allies: diagnostics from morphology to DNA barcoding. Med Mycol, 46(3), 193-208.

Zhang, A. B., Sikes, D. S., Muster, C., & Li, S. Q. (2008). Inferring species membership using DNA sequences with back-propagation neural networks. Syst Biol, 57(2), 202-215.



Abdo, Z., & Golding, G. B. (2007). A step toward barcoding life: a model-based, decision-theoretic method to assign genes to preexisting species groups. Syst Biol, 56(1), 44-56.

Aliabadian, M., Kaboli, M., Prodon, R., Nijman, V., & Vences, M. (2007). Phylogeny of Palaearctic wheatears (genus Oenanthe)–Congruence between morphometric and molecular data. Molecular Phylogenetics and Evolution, 42(3), 665-675.

Baker, A. J. (2007). Molecular Advances in the Study of Geographic Variation and Speciation in Birds. Ornithological Monographs, 63, 18-29.

Baker, A. J., Pereira, S. L., Rogers, D. I., Elbourne, R., & Hassell, C. J. (2007). Mitochondrial-DNA evidence shows the Australian Painted Snipe is a full species, Rostratula australis. Emu, 107(3), 185-189.

Balke, M., Wewalka, G., Alarie, Y., & Ribera, I. (2007). Molecular phylogeny of Pacific Island Colymbetinae: radiation of New Caledonian and Fijian species (Coleoptera, Dytiscidae). Zoologica Scripta, 36(2).

Ballantine, D. L., Saunders, G. W., & Ruiz, H. (2007). Halichrysis corallinarius sp. nov. (Rhodymeniaceae, Rhodophyta) from Puerto Rico, Caribbean Sea. Phycological Research, 55(3), 240 – 248.

Barbar, T., Palma-Silva, C., Paggi, G. M., Bered, F., Fay, M. F., & Lexer, C. (2007). Cross-species transfer of nuclear microsatellite markers: potential and limitations. Molecular Ecology, 0(0).

Berkov, A., Feinstein, J., Small, J., Nkamany, M., & Centeno, P. (2007). Yeasts Isolated from Neotropical Wood-Boring Beetles in SE Peru. Biotropica, 39(4).

Bhadury, P., Austen, M. C., Bilton, D. T., Lambshead, P. J. D., Rogers, A. D., & Smerdon, G. R. (2007). Exploitation of archived marine nematodes a hot lysis DNA extraction protocol for molecular studies. Zoologica Scripta, 36(1).

Bito, D. (2007). An alien in an archipelago: Spathodea campanulata and the geographic variability of its moth (Lepidoptera) communities in the New Guinea and Bismarck Islands. Journal of Biogeography, 34(5).

Boyer, S. L., Baker, J. M., & Giribet, G. (2007). Deep genetic divergences in Aoraki denticulata (Arachnida, Opiliones, Cyphophthalmi): a widespread *€*mite harvestman*€* defies DNA taxonomy. Molecular Ecology, 16(23).

Bucklin, A., Wiebe, P. H., Smolenack, S. B., Copley, N. J., Beaudet, J. G., Bonner, K. G., et al. (2007). DNA barcodes for species identification of euphausiids (Euphausiacea, Crustacea). Journal of Plankton Research, 29(6), 483-493.

Burns, J. M., Janzen, D. H., Hajibabaei, M., Hallwachs, W., & Hebert, P. D. N. (2007). DNA barcodes of closely related (but morphologically and ecologically distinct) species of Skipper Butterflies (Hesperiidae) can differ by only one to three nucleotides. Journal of the Lepidopterists’ Society, 61(3), 138-153.

Byrkjedal, I., Rees, D. J., & Willassen, E. (2007). Lumping lumpsuckers: molecular and morphological insights into the taxonomic status of Eumicrotremus spinosus (Fabricius, 1776) and Eumicrotremus eggvinii Koefoed, 1956 (Teleostei: Cyclopteridae). Journal of Fish Biology, 71(sa), 111-131.

Calmin, G., Belbahri, L., & Lefort, F. (2007). Direct PCR for DNA barcoding in the genera Phytophopthora and Pythium. Biotechnology and Biotechnological Equipment, 21(1), 40-42.

Cardini, A., Thorington, R. W., & Polly, P. D. (2007). Evolutionary acceleration in the most endangered mammal of Canada: speciation and divergence in the Vancouver Island marmot (Rodentia, Sciuridae). Journal of Evolutionary Biology, 20(5).

Carew, M. E., Pettigrove, V., Cox, R. L., & Hoffmann, A. A. (2007). DNA identification of urban Tanytarsini chironomids (Diptera:Chironomidae). Journal of the North American Benthological Society, 26(4), 587–600.

Chantangsi, C., Lynn, D. H., Brandl, M. T., Cole, J. C., Hetrick, N., & Ikonomi, P. (2007). Barcoding ciliates: a comprehensive study of 75 isolates of the genus Tetrahymena. Int J Syst Evol Microbiol, 57(Pt 10), 2412-2423.

Clare, E. L., Lim, B. K., Engstrom, M. D., Eger, J. L., & Hebert, P. D. N. (2007). DNA barcoding of Neotropical bats: species identification and discovery within Guyana. Molecular Ecology Notes, 7(2), 184–190.

Cooper, J. K., Sykes, G., King, S., Cottrill, K., Ivanova, N. V., Hanner, R., et al. (2007). Species identification in cell culture: a two-pronged molecular approach. In Vitro Cell Dev Biol Anim, 43(10), 344-351.

Corin, S. E., Lester, P. J., Abbott, K. L., & Ritchie, P. A. (2007). Inferring historical introduction pathways with mitochondrial DNA: the case of introduced Argentine ants (Linepithema humile) into New Zealand. Diversity and Distributions, 13(5).

Costa, F. O., & Carvalho, G. R. (2007). The Barcode of Life Initiative: synopsis and prospective societal impacts of DNA barcoding of Fish. Genomics, Society and Policy, 3(2), 29-40.

Costa, F. O., deWaard, J. R., Boutillier, J., Ratnasingham, S., Dooh, R., Hajibabaei, M., et al. (2007). Biological identifications through DNA barcodes: the case of the Crustacea Canadian Journal of Fisheries and Aquatic Sciences, 64(2), 272-295.

Dalebout, M. L., Scott Baker, C., Steel, D., Robertson, K. M., Chivers, S. J., Perrin, W. F., et al. (2007). A DIVERGENT mtDNA LINEAGE AMONG MESOPLODON BEAKED WHALES: MOLECULAR EVIDENCE FOR A NEW SPECIES IN THE TROPICAL PACIFIC? Marine Mammal Science, 23(4), 954-966.

Dawnay, N., Ogden, R., McEwing, R., Carvalho, G. R., & Thorpe, R. S. (2007). Validation of the barcoding gene COI for use in forensic genetic species identification. Forensic Sci Int, 173(1), 1-6.

De Queiroz, K. (2007). Species concepts and species delimitation. Syst Biol, 56(6), 879-886.

Demontis, M. A., Ortu, S., Cocco, A., Lentini, A., & Migheli, Q. (2007). Diagnostic markers for Planococcus ficus (Signoret) and Planococcus citri (Risso) by random amplification of polymorphic DNA-polymerase chain reaction and species-specific mitochondrial DNA primers. Journal of Applied Entomology, 131(1).

Derycke, S., Backeljau, T., Vlaeminck, C., Vierstraete, A., Vanfleteren, J., Vincx, M., et al. (2007). Spatiotemporal analysis of population genetic structure in Geomonhystera disjuncta (Nematoda, Monhysteridae) reveals high levels of molecular diversity. Marine Biology Research, 151(5), 1799-1812.

Dupont, S., Wilson, K., Obst, M., Sköld, H., Nakano, H., & Thorndyke, M. C. (2007). Marine ecological genomics: when genomics meets marine ecology. Marine Ecology Progress Series, 332, 257-273.

Ekrem, T., Willassen, E., & Stur, E. (2007). A comprehensive DNA sequence library is essential for identification with DNA barcodes. Mol Phylogenet Evol, 43(2), 530-542.

Elias, M., Hill, R. I., Willmott, K. R., Dasmahapatra, K. K., Brower, A. V., Mallet, J., et al. (2007). Limited performance of DNA barcoding in a diverse community of tropical butterflies. Proc Biol Sci.

Evans, K. M., Wortley, A. H., & Mann, D. G. (2007). An Assessment of Potential Diatom “Barcode” Genes (cox1, rbcL, 18S and ITS rDNA) and their Effectiveness in Determining Relationships in Sellaphora (Bacillariophyta). Protist, 158(3), 349-364.

Feau, N., Joly, D. L., & Hamelin, R. C. (2007). Poplar leaf rusts: model pathogens for a model tree. Canadian Journal of Botany, 85(12), 1127-1135.

Foley, D. H., Wilkerson, R. C., Cooper, R. D., Volovsek, M. E., & Bryan, J. H. (2007). A molecular phylogeny of Anopheles annulipes (Diptera: Culicidae) sensu lato: The most species-rich anopheline Complex. Molecular Phylogenetics and Evolution, 43(1), 283-297.

Forister, M. L., Nice, C. C., Fordyce, J. A., Gompert, Z., & Shapiro, A. M. (2007). Considering evolutionary processes in the use of single-locus genetic data for conservation, with examples from the Lepidoptera Journal of Insect Conservation, 12(1), 37-51.

Fouquet, A., Gilles, A., Vences, M., Marty, C., Blanc, M., & Gemmell, N. J. (2007). Underestimation of species richness in neotropical frogs revealed by mtDNA analyses. PLoS ONE, 2(10), e1109.

Francis, C. M., Kingston, T., & Zubaid, A. (2007). A new species of Kerivoula (Chiroptera: Vespertilionidae) from peninsular Malaysia. Acta Chiropterologica, 9(1), 1-12.

Froslev, T. G., Jeppesen, T. S., Laessoe, T., & Kjoller, R. (2007). Molecular phylogenetics and delimitation of species in Cortinarius section Calochroi (Basidiomycota, Agaricales) in Europe. Mol Phylogenet Evol, 44(1), 217-227.

Gariepy, T. D., Kuhlmann, U., Gillott, C., & Erlandson, M. (2007). Parasitoids, predators and PCR: the use of diagnostic molecular markers in biological control of Arthropods. Journal of Applied Entomology, 131(4).

Geiser, D. M., Klich, M. A., Frisvad, J. C., Peterson, S. W., Varga, J., & Samson, R. A. (2007). The current status of species recognition and identification in Aspergillus. Stud Mycol, 59, 1-10.

Gomez, A., Hughes, R. N., Wright, P. J., Carvalho, G. R., & Lunt, D. H. (2007). Mitochondrial DNA phylogeography and mating compatibility reveal marked genetic structuring and speciation in the NE Atlantic bryozoan Celleporella hyalina. Mol Ecol, 16(10), 2173-2188.

Gomez, A., Wright, P. J., Lunt, D. H., Cancino, J. M., Carvalho, G. R., & Hughes, R. N. (2007). Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon. Proc Biol Sci, 274(1607), 199-207.

Gumovsky, A., Rusina, L., & Firman, L. (2007). Bionomics and morphological and molecular characterization of Elasmus schmitti and Baryscapus elasmi (Hymenoptera: Chalcidoidea, Eulophidae), parasitoids associated with a paper wasp, Polistes dominulus (Vespoidea, Vespidae). Entomological Science, 10(1).

Guralnick, R. P., Hill, A. W., & Lane, M. (2007). Towards a collaborative, global infrastructure for biodiversity assessment. Ecology Letters, 10(8).

Hajibabaei, M., Singer, G. A., Clare, E. L., & Hebert, P. D. N. (2007). Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring. BMC Biol, 5, 24.

Hajibabaei, M., Singer, G. A., Hebert, P. D. N., & Hickey, D. A. (2007). DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics. Trends Genet, 23(4), 167-172.

Hanner, R. H., & Gregory, T. R. (2007). Genomic diversity research and the role of biorepositories. Cell Preservation Technology, 5(2), 93-103.

Hansen, H., Bakke, T. A., & Bachmann, L. (2007). DNA taxonomy and barcoding of monogenean parasites: lessons from Gyrodactylus. Trends Parasitol, 23(8), 363-367.

Hart, M. W., & Sunday, J. (2007). Things fall apart: biological species form unconnected parsimony networks. Biol Lett, 3(5), 509-512.

Hoef-Emden, K., Kupper, F. C., & Andersen, R. A. (2007). Meeting report: Sloan Foundation Workshop to resolve problems relating to the taxonomy of microorganisms and to culture collections arising from the barcoding initiatives; Portland ME, November 6-7, 2006. Protist, 158(2), 135-137.

Hoffmann, K., Discher, S., & Voigt, K. (2007). Revision of the genus Absidia (Mucorales, Zygomycetes) based on physiological, phylogenetic, and morphological characters; thermotolerant Absidia spp. form a coherent group, Mycocladiaceae fam. nov. Mycological Research, 111(10), 1169-1183.

Huang, J., Xu, Q., Sun, Z. J., Tang, G. L., & Su, Z. Y. (2007). Identifying earthworms through DNA barcodes. Pedobiologia, 51(4), 301-309.

Hulcr, J., Miller, S. E., Setliff, G. P., Darrow, K., Mueller, N. D., Hebert, P. D. N., et al. (2007). DNA barcoding confirms polyphagy in a generalist moth, Homona mermerodes (Lepidoptera: Tortricidae). Molecular Ecology Notes, 7(4), 549–557.

Ivanova, N. V., Zemlak, T. S., Hanner, R. H., & Hebert, P. D. N. (2007). Universal primer cocktails for fish DNA barcoding. Molecular Ecology Notes, 7(4), 544–548.

Järnegren, J., Schander, C., Sneli, J.-A., Rønningen, V., & Young, C. M. (2007). Four genes, morphology and ecology: distinguishing a new species of Acesta (Mollusca; Bivalvia) from the Gulf of Mexico. Marine Biology Research, 152(1), 43-55.

Kaczmarska, I., Reid, C., & Moniz, M. (2007). Diatom taxonomy: morphology, molecules and barcodes. Proceedings of the 1st Central-European Diatom Meeting, 1, 69-72.

Kelly, R. P., Sarkar, I. N., Eernisse, D. J., & Desalle, R. (2007). DNA barcoding using chitons (genus Mopalia). Molecular Ecology Notes, 7(2).

Kerr, K. C. R., Stoeckle, M. Y., Dove, C. J., Weigt, L. A., Francis, C. M., & Hebert, P. D. N. (2007). Comprehensive DNA barcode coverage of North American birds. Molecular Ecology Notes, 7(4), 535–543.

Knowles, L. L., & Carstens, B. C. (2007). Delimiting Species without Monophyletic Gene Trees. Syst Biol, 56(6), 887-895.

Kohler, F. (2007). From DNA taxonomy to barcoding – how a vague idea evolved into a biosystematic tool. Mitteilungen aus dem Museum für Naturkunde Berlin, Zoologische Reihe, 83, 44-51.

Kress, W. J., & Erickson, D. L. (2007). A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region. PLoS ONE, 2, e508.

Kristensen, R., Berdal, K. G., & Holst-Jensen, A. (2007). Simultaneous detection and identification of trichothecene- and moniliformin-producing Fusarium species based on multiplex SNP analysis. J Appl Microbiol, 102(4), 1071-1081.

Kristensen, R., Gauthier, G., Berdal, K. G., Hamels, S., Remacle, J., & Holst-Jensen, A. (2007). DNA microarray to detect and identify trichothecene- and moniliformin-producing Fusarium species. J Appl Microbiol, 102(4), 1060-1070.

Krug, P. J., Ellingson, R. A., Burton, R., & Valdes, A. (2007). A new poecilogonous species of sea slug (Opisthobranchia: Sacoglossa) from California: comparison with the planktotrophic congener Alderia modesta (Loven, 1844). J. Mollus. Stud., 73(1), 29-38.

Kumar Pradeep, N., Rajavel, A. R., Natarajan, R., & Jambulingam, P. (2007). DNA Barcodes Can Distinguish Species of Indian Mosquitoes (Diptera: Culicidae). Journal of Medical Entomology, 44(1), 1-7.

Kutschera, U., Pfeiffer, I., & Ebermann, E. (2007). The European land leech: biology and DNA-based taxonomy of a rare species that is threatened by climate warming. Naturwissenschaften, 94(12), 967-974.

Landry, J.-F. (2007). Taxonomic review of the leek moth genus Acrolepiopsis (Lepidoptera: Acrolepiidae) in North America. The Canadian Entomologist, 139(3), 319-353.

Lane, C. E., Lindstrom, S. C., & Saunders, G. W. (2007). A molecular assessment of northeast Pacific Alaria species (Laminariales, Phaeophyceae) with reference to the utility of DNA barcoding. Mol Phylogenet Evol, 44(2), 634-648.

Larson, B. M. H. (2007). DNA barcoding: the social frontier. Frontiers in Ecology and the Environment, 5(8), 437-442.

Last, P. R., Gledhill, D. C., & Holmes, B. H. (2007). A new handfish, Brachionichthys australis sp. nov. (Lophiiformes:Brachionichthyidae), with a redescription of the critically endangered spotted handfish, B. hirsutus (Lacepède). Zootaxa, 1666, 53-68.

Lemer, S., Aurelle, D., Vigliola, L., Durand, J. D., & Borsa, P. (2007). Cytochrome b barcoding, molecular systematics and geographic differentiation in rabbitfishes (Siganidae). C R Biol, 330(1), 86-94.

Lévesque, C. A. (2007). Molecular diagnostics of soilborne fungal pathogens and applications to disease management. In Z. K. Punja, S. DeBoer & H. Sanfaçon (Eds.), Biotechnology and Plant Disease Management (pp. 146-164). Wallingford, UK CABI Books.

Lissovsky, A. A., Ivanova, N. V., & Borisenko, A. V. (2007). Molecular phylogenetics and taxonomy of the subgenus Pika (Ochotona, Lagomorpha). Journal of Mammalogy, 88(5), 1195–1204.

Litaker, W. R., Vandersea, M. W., Kibler, S. R., Reece, K. S., Stokes, N. A., Lutzoni, F. M., et al. (2007). Recognizing Dinoflagellate Species using its rDNA Sequences. Journal of Phycology, 43(2).

Little, D. P., & Stevenson, D. W. (2007). A comparison of algorithms for the identification of specimens using DNA barcodes: examples from gymnosperms. Cladistics, 23(1).

Lou, M., & Golding, G. B. (2007). fingerprint: visual depiction of variation in multiple sequence alignments. Molecular Ecology Notes, 7(6), 908–914

Marussich, W. A., & Machado, C. A. (2007). Host-specificity and coevolution among pollinating and nonpollinating New World fig wasps. Molecular Ecology, 16(9), 1925 -1946.

Maslov, D. A., Westenberger, S. J., Xu, X., Campbell, D. A., & Sturm, N. R. (2007). Discovery and Barcoding by Analysis of Spliced Leader RNA Gene Sequences of New Isolates of Trypanosomatidae from Heteroptera in Costa Rica and Ecuador. The Journal of Eukaryotic Microbiology, 54(1).

Meixner, M. J., Luter, C., Eckert, C., Itskovich, V., Janussen, D., von Rintelen, T., et al. (2007). Phylogenetic analysis of freshwater sponges provide evidence for endemism and radiation in ancient lakes. Mol Phylogenet Evol, 45(3), 875-886.

Meldal, B. H., Debenham, N. J., De Ley, P., De Ley, I. T., Vanfleteren, J. R., Vierstraete, A. R., et al. (2007). An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa. Mol Phylogenet Evol, 42(3), 622-636.

Meyer, M., Stenzel, U., Myles, S., Prufer, K., & Hofreiter, M. (2007). Targeted high-throughput sequencing of tagged nucleic acid samples. Nucleic Acids Res, 35(15), e97.

Mikkelsen, N. T., Schander, C., & Willassen, E. (2007). Local scale DNA barcoding of bivalves (Mollusca): a case study. Zoologica Scripta, 0(0).

Miller, S. E. (2007). DNA barcoding and the renaissance of taxonomy. Proc Natl Acad Sci U S A, 104(12), 4775-4776.

Min, X. J., & Hickey, D. A. (2007). Assessing the effect of varying sequence length on DNA barcoding of fungi. Molecular Ecology Notes, 7(3), 365–373.

Min, X. J., & Hickey, D. A. (2007). DNA barcodes provide a quick preview of mitochondrial genome composition. PLoS ONE, 2, e325.

Nagy, V., Seidl, V., Szakacs, G., Komon-Zelazowska, M., Kubicek, C. P., & Druzhinina, I. S. (2007). Application of DNA bar codes for screening of industrially important fungi: the haplotype of Trichoderma harzianum sensu stricto indicates superior chitinase formation. Appl Environ Microbiol, 73(21), 7048-7058.

Nelson, L. A., Wallman, J. F., & Dowton, M. (2007). Using COI barcodes to identify forensically and medically important blowflies. Medical and Veterinary Entomology, 21(1).

Nicolaisen, M., & Bertaccini, A. (2007). An oligonucleotide microarray-based assay for identification of phytoplasma 16S ribosomal groups. Plant Pathology, 56(2), 332-336.

Parameswaran, P., Jalili, R., Tao, L., Shokralla, S., Gharizadeh, B., Ronaghi, M., et al. (2007). A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing. Nucleic Acids Res, 35(19), e130.

Park, M. H., Sim, C. J., Baek, J., & Min, G. S. (2007). Identification of genes suitable for DNA barcoding of morphologically indistinguishable Korean Halichondriidae sponges. Mol Cells, 23(2), 220-227.

Pfenninger, M., Nowak, C., Kley, C., Steinke, D., & Streit, B. (2007). Utility of DNA taxonomy and barcoding for the inference of larval community structure in morphologically cryptic Chironomus (Diptera) species. Molecular Ecology, 16(9).

Randrianiaina, R.-D., Glaw, F., Thomas, M., Glos, J., Raminosoa, N., & Vences, M. (2007). Descriptions of the tadpoles of two species of Gephyromantis, with a discussion of the phylogenetic origin of direct development in mantellid frogs. Zootaxa, 1401, 53-61.

Ratnasingham, S., & Hebert, P. D. N. (2007). bold: The Barcode of Life Data System ( Molecular Ecology Notes, 7(3), 355–364.

Richardson, D. E., Vanwye, J. D., Exum, A. M., Cowen, R. K., & Crawford, D. L. (2007). High-throughput species identification: from DNA isolation to bioinformatics. Molecular Ecology Notes, 7(2), 199-207.

Robins, J. H., Hingston, M., Matisoo-Smith, E., & Ross, H. A. (2007). Identifying Rattus species using mitochondrial DNA. Molecular Ecology Notes, 7(5), 717-729.

Rock, J., Ironside, J., Potter, T., Whiteley, N. M., & Lunt, D. H. (2007). Phylogeography and environmental diversification of a highly adaptable marine amphipod, Gammarus duebeni. Heredity, 99(1), 102-111.

Roe, A. D., & Sperling, F. A. (2007). Patterns of evolution of mitochondrial cytochrome c oxidase I and II DNA and implications for DNA barcoding. Mol Phylogenet Evol, 44(1), 325-345.

Roe, A. D., & Sperling, F. A. H. (2007). Population structure and species boundary delimitation of cryptic Dioryctria moths: an integrative approach. Molecular Ecology, 0(0).

Ros, V. I., & Breeuwer, J. A. (2007). Spider mite (Acari: Tetranychidae) mitochondrial COI phylogeny reviewed: host plant relationships, phylogeography, reproductive parasites and barcoding. Exp Appl Acarol, 42(4), 239-262.

Rosenberg, N. A. (2007). Statistical Tests for Taxonomic Distinctiveness from Observations of Monophyly. Evolution, 61(2).

Rowley, D. L., Coddington, J. A., Gates, M. W., Norrbom, A. L., Ochoa, R. A., Vandenberg, N. J., et al. (2007). Vouchering DNA-barcoded specimens: test of a nondestructive extraction protocol for terrestrial arthropods. Molecular Ecology Notes, 7(6).

Sass, C., Little, D. P., Stevenson, D. W., & Specht, C. D. (2007). DNA barcoding in the cycadales: testing the potential of proposed barcoding markers for species identification of cycads. PLoS ONE, 2(11), e1154.

Scheffer, S. J., & Hawthorne, D. J. (2007). Molecular evidence of host-associated genetic divergence in the holly leafminer Phytomyza glabricola (Diptera: Agromyzidae): apparent discordance among marker systems. Molecular Ecology, 16(13).

Schill, R. O., & Steinbrck, G. (2007). Identification and differentiation of Heterotardigrada and Eutardigrada species by riboprinting. Journal of Zoological Systematics and Evolutionary Research, 45(3).

Scholtens, B. G., & Wagner, D. L. (2007). Lepidoptera of Great Smoky Mountains National Park: Methods and Results of the Inventory. Southeastern Naturalist(Special Issue 1), 193-206.

Seifert, K. A., Samson, R. A., Dewaard, J. R., Houbraken, J., Levesque, C. A., Moncalvo, J. M., et al. (2007). Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case. Proc Natl Acad Sci U S A, 104(10), 3901-3906.

Sevilla, R. G., Diez, A., Norn, M., Mouchel, O., Jrme, M., Verrez-Bagnis, V., et al. (2007). Primers and polymerase chain reaction conditions for DNA barcoding teleost fish based on the mitochondrial cytochrome b and nuclear rhodopsin genes. Molecular Ecology Notes, 7(5), 730-734.

Shearer, T. L., & Coffroth, M. A. (2007). Barcoding corals: limited by interspecific divergence, not intraspecific variation. Molecular Ecology Notes, 0(0).

Shneyer, V. S. (2007). On the species-specificity of DNA: fifty years later. Biochemistry (Mosc), 72(12), 1377-1384.

Smith, M. A., Wood, D. M., Janzen, D. H., Hallwachs, W., & Hebert, P. D. N. (2007). DNA barcodes affirm that 16 species of apparently generalist tropical parasitoid flies (Diptera, Tachinidae) are not all generalists. Proc Natl Acad Sci U S A, 104(12), 4967-4972.

Soltis, D. E. (2007). Reconstructing the Tree of Life: Taxonomy and Systematics of Species Rich Taxa1. Evolution, 61(12), 3007–3011.

Sonnenberg, R., Nolte, A. W., & Tautz, D. (2007). An evaluation of LSU rDNA D1-D2 sequences for their use in species identification. Front Zool, 4, 6.

Summerbell, R. C., Moore, M. K., Starink-Willemse, M., & Van Iperen, A. (2007). ITS barcodes for Trichophyton tonsurans and T. equinum. Med Mycol, 45(3), 193-200.

Sword, G. A., Senior, L. B., Gaskin, J. F., & Joern, A. (2007). Double trouble for grasshopper molecular systematics: intra-individual heterogeneity of both mitochondrial 12S-valine-16S and nuclear internal transcribed spacer ribosomal DNA sequences in Hesperotettix viridis (Orthoptera: Acrididae). Systematic Entomology, 32(3).

Taberlet, P., Coissac, E., Pompanon, F., Gielly, L., Miquel, C., Valentini, A., et al. (2007). Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Res, 35(3), e14.

Teder, T., Moora, M., Roosaluste, E., Zobel, K., Prtel, M., Kljalg, U., et al. (2007). Monitoring of Biological Diversity: a Common-Ground Approach. Conservation Biology, 21(2).

Trewick, S. A. (2007). DNA Barcoding is not enough: mismatch of taxonomy and genealogy in New Zealand grasshoppers (Orthoptera: Acrididae). Cladistics, 0(0).

Triantafyllidis, A., Bobori, D. C., & C., K. (2007). DNA barcoding in Greek freshwater fish: the cases of Doirani and Volvi lakes. 11th Congress of The European Society for Evolutionary Biology, Uppsala, Sweden, August 20-25, 432.

Velzen, R., Bakker, F. T., & Loon, J. (2007). DNA barcoding reveals hidden species diversity in Cymothoe (Nymphalidae). Proc. Neth. Entomol. Soc. Meet., 18, 95-103.

Victor, B. C. (2007). Coryphopterus kuna, a new goby (Perciformes: Gobiidae: Gobiinae) from the western Caribbean, with the identification of the late larval stage and an estimate of the pelagic larval duration. Zootaxa, 1526, 51-61.

Vogler, A. P., & Monaghan, M. T. (2007). Recent advances in DNA taxonomy. Journal of Zoological Systematics and Evolutionary Research, 45(1).

Wandeler, P., Hoeck, P. E., & Keller, L. F. (2007). Back to the future: museum specimens in population genetics. Trends Ecol Evol.

Ward, R. D., & Holmes, B. H. (2007). An analysis of nucleotide and amino acid variability in the barcode region of cytochrome c oxidase I (cox1) in fishes. Molecular Ecology Notes, 7(6).

Waugh, J. (2007). DNA barcoding in animal species: progress, potential and pitfalls. Bioessays, 29(2), 188-197.

Whitworth, T. L., Dawson, R. D., Magalon, H., & Baudry, E. (2007). DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae). Proc Biol Sci, 274(1619), 1731-1739.

Wiemers, M., & Fiedler, K. (2007). Does the DNA barcoding gap exist? – a case study in blue butterflies (Lepidoptera: Lycaenidae). Front Zool, 4, 8.

Wiens, J. J. (2007). Species delimitation: new approaches for discovering diversity. Syst Biol, 56(6), 875-878.

Zapata, F. A., & Ross Robertson, D. (2007). How many species of shore fishes are there in the Tropical Eastern Pacific? Journal of Biogeography, 34(1).

Zarowiecki, M. Z., Huyse, T., & Littlewood, D. T. J. (2007). Making the most of mitochondrial genomes – Markers for phylogeny, molecular ecology and barcodes in Schistosoma (Platyhelminthes: Digenea). International Journal for Parasitology, 37(12), 1401-1418.

Zayed, A., Constantin, S. A., & Packer, L. (2007). Successful biological invasion despite a severe genetic load. PLoS ONE, 2(9), e868.




Astrin, J. J., Huber, B. A., Misof, B., & Kltsch, C. F. C. (2006). Molecular taxonomy in pholcid spiders (Pholcidae, Araneae): evaluation of species identification methods using CO1 and 16S rRNA. Zoologica Scripta, 35(5).

Ball, S. L., & Armstrong, K. F. (2006). DNA barcodes for insect pest identification: a test case with tussock moths (Lepidoptera : Lymantriidae). Canadian Journal of Forest Research, 36(2), 337-350.

Barber, P., & Boyce, S. L. (2006). Estimating diversity of Indo-Pacific coral reef stomatopods through DNA barcoding of stomatopod larvae. Proc Biol Sci, 273(1597), 2053-2061.

Bely, A. E., & Weisblat, D. A. (2006). Lessons from leeches: a call for DNA barcoding in the lab. Evol Dev, 8(6), 491-501.

Bergemann, S. E., & Garbelotto, M. (2006). High diversity of fungi recovered from the roots of mature tanoak (Lithocarpus densiflorus) in northern California Canadian Journal of Botany, 84(9), 1380-1394.

Bhadury, P., Austen, M. C., Bilton, D. T., Lambshead, P. J. D., Rogers, A. D., & Smerdon, G. R. (2006). Development and evaluation of a DNA-barcoding approach for the rapid identification of nematodes. Marine Ecology Progress Series, 320, 1-9.

Bhadury, P., Austen, M. C., Bilton, D. T., Lambshead, P. J. D., Rogers, A. D., & Smerdon, G. R. (2006). Molecular detection of marine nematodes from environmental samples: overcoming eukaryotic interference. Aquatic Microbial Ecology, 44(1), 97-103.

Brower, A. V. Z. (2006). Problems with DNA barcodes for species delimitation: ‘ten species’ of Astraptes fulgerator reassessed (Lepidoptera:Hesperiidae). Systematics and Biodiversity, 4(2), 127-132.

Caesar, R. M., Srensson, M., & Cognato, A. I. (2006). Integrating DNA data and traditional taxonomy to streamline biodiversity assessment: an example from edaphic beetles in the Klamath ecoregion, California, USA. Diversity and Distributions, 12(5).

Cameron, S., Rubinoff, D., & Will, K. (2006). Who will actually use DNA barcoding and what will it cost? Syst Biol, 55(5), 844-847.

Caterino, M. S., & Tishechkin, A. K. (2006). DNA identification and morphological description of the first confirmed larvae of Hetaeriinae (Coleoptera: Histeridae). Systematic Entomology, 31(3).

Chu, K. H., Li, C. P., & Qi, J. (2006). Ribosomal RNA as molecular barcodes: a simple correlation analysis without sequence alignment. Bioinformatics, 22(14), 1690-1701.

Cognato, A. I. (2006). Standard Percent DNA Sequence Difference for Insects Does Not Predict Species Boundaries. Journal of Economic Entomology, 99(4), 1037-1045.

Cognato, A. I., Caesar, R. M., Blaxter, M., & Vogler, A. P. (2006). Two Views: Will DNA barcoding advance efforts to conserve biodiversity more efficiently than traditional taxonomic methods? Frontiers in Ecology and the Environment, 4(5), 268-273.

Cowan, R. S., Chase, M. W., Kress, W. J., & Savolainen, V. (2006). 300,000 species to identify: problems, progress, and prospects in DNA barcoding of land plants Taxon, 55(3), 611-616.

Cywinska, A., Hunter, F. F., & Hebert, P. D. N. (2006). Identifying Canadian mosquito species through DNA barcodes. Medical and Veterinary Entomology, 20(4), 413-424.

Darling, J. (2006). The Value of Barcoding. BioScience, 56(9), 710-711.

Dasmahapatra, K. K., & Mallet, J. (2006). Taxonomy: DNA barcodes: recent successes and future prospects. Heredity, 97(4), 254-255.

Derycke, S., Backeljau, T., Vlaeminck, C., Vierstraete, A., Vanfleteren, J., Vincx, M., et al. (2006). Seasonal dynamics of population genetic structure in cryptic taxa of the Pellioditis marina complex (Nematoda: Rhabditida). Genetica, 128(1-3), 307-321.

Desalle, R. (2006). Species discovery versus species identification in DNA barcoding efforts: response to Rubinoff. Conserv Biol, 20(5), 1545-1547.

Duminil, J., Caron, H., Scotti, I., Cazal, S.-O., & Petit, R. J. (2006). Blind population genetics survey of tropical rainforest trees. Molecular Ecology, 15(12).

Erpenbeck, D., Hooper, J. N. A., & Wrheide, G. (2006). CO1 phylogenies in diploblasts and the ‘Barcoding of Life’ are we sequencing a suboptimal partition? Molecular Ecology Notes, 6(2).

Fitzhugh, K. (2006). DNA barcoding: An instance of technology-driven science? BioScience, 56(6), 462-463.

Fleischer, R. C., Kirchman, J. J., Dumbacher, J. P., Bevier, L., Dove, C., Rotzel, N. C., et al. (2006). Mid-Pleistocene divergence of Cuban and North American ivory-billed woodpeckers. Biol Lett, 2(3), 466-469.

Fliegerova, K., Mrazek, J., & Voigt, K. (2006). Differentiation of anaerobic polycentric fungi by rDNA PCR-RFLP. Folia Microbiol (Praha), 51(4), 273-277.

Geenen, S., Jordaens, K., & Backeljau, T. (2006). Molecular systematics of the Carinarion complex (Mollusca: Gastropoda: Pulmonata): a taxonomic riddle caused by a mixed breeding system. Biological Journal of the Linnean Society, 89(4), 589-604.

Godfray, H. J. C. (2006). To Boldly Sequence. Trends in Ecology and Evolution, 21(11), 603-604.

Gompert, Z., Nice, C. C., Fordyce, J. A., Forister, M. L., & Shapiro, A. M. (2006). Identifying units for conservation using molecular systematics: the cautionary tale of the Karner blue butterfly. Molecular Ecology, 15(7).

Gray, D. A., Barnfield, P., Seifried, M., & Richards, M. H. (2006). Molecular divergence between Gryllus rubens and Gryllus texensis, sister species of field crickets (Orthoptera: Gryllidae). The Canadian Entomologist, 138(3), 305-313.

Gurney, R. H., Grewe, P. M., & Thresher, R. E. (2006). Mitochondrial DNA Haplotype Variation in the Parasitic Cirripede Sacculina Carcini Observed in the Cytochrome Oxidase Gene (COI). Journal of Crustacean Biology, 23(3), 326-330.

Hageskal, G., Knutsen, A. K., Gaustad, P., de Hoog, G. S., & Skaar, I. (2006). Diversity and significance of mold species in Norwegian drinking water. Appl Environ Microbiol, 72(12), 7586-7593.

Hajibabaei, M., Janzen, D. H., Burns, J. M., Hallwachs, W., & Hebert, P. D. N. (2006). DNA barcodes distinguish species of tropical Lepidoptera. Proc Natl Acad Sci U S A, 103(4), 968-971.

Hajibabaei, M., Singer, G. A., & Hickey, D. A. (2006). Benchmarking DNA barcodes: An assessment using available primate sequences. Genome, 49(7), 851-854.

Hajibabaei, M., Smith, M. A., Janzen, D. H., Rodriguez, J. J., Whitfield, J. B., & Hebert, P. D. N. (2006). A minimalist barcode can identify a specimen whose DNA is degraded. Molecular Ecology Notes, 6(4), 959–964.

Handfield, L., & Handfield, D. (2006). A new species of Capis (Lepidoptera: Noctuidae) from Québec, Canada. The Canadian Entomologist, 138(3), 333-338.

Herre, E. A. (2006). Barcoding helps biodiversity fly. Proc Natl Acad Sci U S A, 103(11), 3949-3950.

Hickerson, M. J., Meyer, C. P., & Moritz, C. (2006). DNA barcoding will often fail to discover new animal species over broad parameter space. Syst Biol, 55(5), 729-739.

Hogg, I. D., Stevens, M. I., Schnabel, K. E., & Chapman, A. M. (2006). Deeply divergent lineages of the widespread New Zealand amphipod Paracalliope fluviatilis revealed using allozyme and mitochondrial DNA analyses. Freshwater Biology, 51(2).

Ivanova, N. V., Dewaard, J. R., & Hebert, P. D. N. (2006). An inexpensive, automation-friendly protocol for recovering high-quality DNA. Molecular Ecology Notes, 6(4), 998–1002.

Jones, M., & Blaxter, M. (2006). TaxMan: a taxonomic database manager. BMC Bioinformatics, 7, 536.

Kaila, L., & Gunilla, S. (2006). DNA barcodes: Evaluating the potential of COI to differentiate closely related species of Elachista (Lepidoptera: Gelechioidea: Elachistidae) from Australia. Zootaxa, 1170, 1-26.

Kappner, I., & Bieler, R. (2006). Phylogeny of venus clams (Bivalvia: Venerinae) as inferred from nuclear and mitochondrial gene sequences. Mol Phylogenet Evol, 40(2), 317-331.

Kikkert, J. R., Hoepting, C. A., Wu, Q., P., W., R., B., & A.M., S. (2006). Detection of Contarinia nasturtii (Diptera: Cecidomyiidae) in New York, a New Pest of Cruciferous Plants in the United States. Journal of Economic Entomology, 99(4), 1310-1315.

Kunz, W. (2006). DNA barcoding in taxonomy and the perception of species in nature. BioScience, 56(2), 93-93.

Lefebure, T., Douady, C. J., Gouy, M., & Gibert, J. (2006). Relationship between morphological taxonomy and molecular divergence within Crustacea: proposal of a molecular threshold to help species delimitation. Mol Phylogenet Evol, 40(2), 435-447.

Long, D. G., Paton, J. A., Squirrell, J., Woodhead, M., & Hollingsworth, P. M. (2006). Morphological, ecological and genetic evidence for distinguishing Anastrophyllum joergensenii Schiffn. and A-alpinum Steph. (Jungermanniopsida : Lophoziaceae). Journal of Bryology, 28(2), 108-117.

Lynn, D. H., & Struder-Kypke, M. C. (2006). Species of tetrahymena identical by small subunit rRNA gene sequences are discriminated by mitochondrial cytochrome c oxidase I gene sequences. J Eukaryot Microbiol, 53(5), 385-387.

McLeish, M. J., Chapman, T. W., & Mound, L. A. (2006). Gall morpho-type corresponds to separate species of gall-inducing thrips (Thysanoptera: Phlaeothripidae). Biological Journal of the Linnean Society, 88(4).

Meier, R., Shiyang, K., Vaidya, G., & Ng, P. K. (2006). DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Syst Biol, 55(5), 715-728.

Memon, N., Meier, R., Manan, A., & Su, K. F.-Y. (2006). On the use of DNA sequences for determining the species limits of a polymorphic new species in the stink bug genus Halys (Heteroptera: Pentatomidae) from Pakistan. Systematic Entomology, 31(4).

Mengual, X., Ståhls, G., Vujić, A., & Marcos-García, M. (2006). Integrative taxonomy of Iberian Merodon species (Diptera, Syrphidae). Zootaxa, 1377, 1-26.

Monaghan, M. T., Balke, M., Pons, J., & Vogler, A. P. (2006). Beyond barcodes: complex DNA taxonomy of a South Pacific Island radiation. Proc Biol Sci, 273(1588), 887-893.

Mtambo, J., Van Bortel, W., Madder, M., Roelants, P., & Backeljau, T. (2006). Comparison of preservation methods of Rhipicephalus appendiculatus (Acari: Ixodidae) for reliable DNA amplification by PCR. Exp Appl Acarol, 38(2-3), 189-199.

Mueller, R. L. (2006). Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis. Syst Biol, 55(2), 289-300.

Newmaster, S., Fazekas, A., & Ragupathy, S. (2006). DNA barcoding in land plants: evaluation of rbcL in a multigene tiered approach. Canadian Journal of Botany, 84(3), 335-341.

Nielsen, R., & Matz, M. (2006). Statistical approaches for DNA barcoding. Syst Biol, 55(1), 162-169.

Nilsson, R. H., Ryberg, M., Kristiansson, E., Abarenkov, K., Larsson, K. H., & Koljalg, U. (2006). Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective. PLoS ONE, 1, e59.

Pedersen, N., Russell, S. J., Newton, A. E., & Ansell, S. W. (2006). A novel molecular protocol for the rapid extraction of DNA from bryophytes and the utility of direct amplification of DNA from a single dwarf male. The Bryologist, 109(2), 257-264.

Pegg, G. G., Sinclair, B., Briskey, L., & Aspden, W. J. (2006). MtDNA barcode identification of fish larvae in the southern Great Barrier Reef, Australia. Scientia Marina, 70(S2), 7-12.

Pfenninger, M., Cordellier, M., & Streit, B. (2006). Comparing the efficacy of morphologic and DNA-based taxonomy in the freshwater gastropod genus Radix (Basommatophora, Pulmonata). BMC Evol Biol, 6, 100.

Pons, J. (2006). DNA-based identification of preys from non-destructive, total DNA extractions of predators using arthropod universal primers. Molecular Ecology Notes, 6(3).

Powell, R. L., Reyes, S. R., & Lannutti, D. I. (2006). Molecular barcoding, DNA from snake venom, and toxinological research: Considerations and concerns. Toxicon, 48(8), 1095-1097.

Presting, G. (2006). Identification of conserved regions in the plastid genome: implications for DNA barcoding and biological function. Canadian Journal of Botany, 84(9), 1434-1443.

Raharivololoniaina, L., Grosjean, S., Raminosoa, N. R., Glaw, F., & Vences, M. (2006). Molecular identification, description, and phylogenetic implications of the tadpoles of 11 species of Malagasy treefrogs, genus Boophis. Journal of Natural History, 40((23&24)), 1449-1480.

Robba, L., Russell, S. J., Barker, G. L., & Brodie, J. (2006). Assessing the use of the mitochondrial cox1 marker for use in DNA barcoding of red algae (Rhodophyta). American Journal of Botany, 93(8), 1101-1108.

Roe, A. D., Stein, J. D., Gillette, N. E., & Sperling, F. A. H. (2006). Identification of Dioryctria (Lepidoptera: Pyralidae) in a Seed Orchard at Chico, California. Annals of the Entomological Society of America, 99(3), 433-448.

Rojo, S., Stahls, G., Perez-Banon, C., & Marcos-Garcia, M. A. (2006). Testing molecular barcodes: Invariant mitochondrial DNA sequences vs the larval and adult morphology of West Palaearctic Pandasyopthalmus species (Diptera : Syrphidae : Paragini). European Journal of Entomology, 103(2), 443-458.

Rubinoff, D. (2006). DNA barcoding evolves into the familiar. Conserv Biol, 20(5), 1548-1549.

Rubinoff, D. (2006). Utility of mitochondrial DNA barcodes in species conservation. Conserv Biol, 20(4), 1026-1033.

Rubinoff, D., Cameron, S., & Will, K. (2006). Are plant DNA barcodes a search for the Holy Grail? Trends Ecol Evol, 21(1), 1-2.

Rubinoff, D., Cameron, S., & Will, K. (2006). A genomic perspective on the shortcomings of mitochondrial DNA for “barcoding” identification. J Hered, 97(6), 581-594.

Scheffer, S. J., & Lewis, M. L. (2006). Mitochondrial Phylogeography of the Vegetable Pest Liriomyza trifolii (Diptera: Agromyzidae): Diverged Clades and Invasive Populations. Annals of the Entomological Society of America, 99(6), 991-998.

Scheffer, S. J., Lewis, M. L., & Joshi, R. C. (2006). DNA barcoding applied to invasive leafminers (Diptera : Agromyzidae) in the Philippines. Annals of the Entomological Society of America 99(2), 204-210.

Schneider, H., & Schuettpelz, E. (2006). Identifying fern gametophytes using DNA sequences. Molecular Ecology Notes, 6(4).

Scicluna, S. M., Tawari, B., & Clark, C. G. (2006). DNA barcoding of blastocystis. Protist, 157(1), 77-85.

Skevington, J. H. (2006). Revision of Fijian Collinias Aczél (Diptera: Pipinculidae). Bishop Museum Occasional Papers, 89, 11-43.

Smith, M. A., Woodley, N. E., Janzen, D. H., Hallwachs, W., & Hebert, P. D. (2006). DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae). Proc Natl Acad Sci U S A, 103(10), 3657-3662.

Sogin, M. L., Morrison, H. G., Huber, J. A., Welch, D. M., Huse, S. M., Neal, P. R., et al. (2006). Microbial diversity in the deep sea and the underexplored “rare biosphere”. Proc Natl Acad Sci U S A, 103(32), 12115-12120.

Spies, I. B., Gaichas, S., Stevenson, D. E., Orr, J. W., & Canino, M. F. (2006). DNA-based identification of Alaska skates (Amblyraja, Bathyraja and Raja: Rajidae) using cytochrome c oxidase subunit I (coI) variation. Journal of Fish Biology, 69(sb).

Stribling, J. (2006). Environmental Protection Using DNA Barcodes or Taxa? BioScience, 56(11), 878-879.

Vejarano, S., Thomas, M., & Vences, M. (2006). Comparative larval morphology in Madagascan frogs of the genus Guibemantis (Amphibia : Mantellidae). Zootaxa, 1329, 39-57.

Webb, K. E., Barnes, D. K. A., Clark, M. S., & Bowden, D. A. (2006). DNA barcoding: A molecular tool to identify Antarctic marine larvae. Deep-Sea Res Part II-Tropical Stud Oceanogr, 53(8-10), 1053-1060

Webster, B. L., Southgate, V. R., & Littlewood, D. T. (2006). A revision of the interrelationships of Schistosoma including the recently described Schistosoma guineensis. Int J Parasitol, 36(8), 947-955.

Witt, J. D., Threloff, D. L., & Hebert, P. D. N. (2006). DNA barcoding reveals extraordinary cryptic diversity in an amphipod genus: implications for desert spring conservation. Mol Ecol, 15(10), 3073-3082.

Wörheide, G. (2006). Low variation in partial cytochrome oxidase subunit I (COI) mitochondrial sequences in the coralline demosponge Astrosclera willeyana across the Indo-Pacific. Marine Biology, 148(5), 907-912.

Yoder, M., De Ley, I. T., King, I., Mundo-Ocampo, M., Mann, J., Blaxter, M., et al. (2006). DESS: a versatile solution for preserving morphology and extractable DNA of nematodes Nematology, 8(3), 367-376.

Yoo, H. S., Eah, J. Y., Kim, J. S., Kim, Y. J., Min, M. S., Paek, W. K., et al. (2006). DNA barcoding korean birds. Mol Cells, 22(3), 323-327.




Armstrong, K. F., & Ball, S. L. (2005). DNA barcodes for biosecurity: invasive species identification. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1813-1823.

Ball, S. L., Hebert, P. D. N., Burian, S. K., & Webb, J. M. (2005). Biological identifications of mayflies (Ephemeroptera) using DNA barcodes. Journal of the North American Benthological Society, 24(3), 508-524.

Barrett, R. D. H., & Hebert, P. D. N. (2005). Identifying spiders through DNA barcodes Canadian Journal of Zoology, 83(3), 481-491.

Beardsley, S. (2005). Bending to bar codes. Sci Am, 292(5), 26, 28.

Bhadury, P., Austen, M. C., Bilton, D. T., Lambshead, P. J. D., Rogers, A. D., & Smerdon, G. R. (2005). Combined morphological and molecular analysis of individual nematodes through short-term preservation in formalin. Molecular Ecology Notes, 5(4), 965-968.

Blaxter, M., Mann, J., Chapman, T., Thomas, F., Whitton, C., Floyd, R., et al. (2005). Defining operational taxonomic units using DNA barcode data. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1935-1943.

Burns, J. M., & Janzen, D. H. (2005). What’s in a name? Lepidoptera : Hesperiidae : Pyrginae : Telemiades Hubner 1819 Pyrdalus Mabille 1903 : New combinations Telemiades corbulo (Stoll) and Telemiades oiclus (Mabille)-and more. Proceedings of the Entomological Society of Washington, 107(4), 770-781.

Chase, M. W., Salamin, N., Wilkinson, M., Dunwell, J. M., Kesanakurthi, R. P., Haidar, N., et al. (2005). Land plants and DNA barcodes: short-term and long-term goals. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1889-1895.

Cook, A. A., Bhadury, P., Debenham, N. J., Meldal, B. H. M., Blaxter, M. L., Smerdon, G. R., et al. (2005). Denaturing Gradient Gel Electrophoresis (DGGE) as a tool for the identification of marine nematodes. Mar Ecol Prog Ser, 291, 103-113.

Creer, S. (2005). On the application of molecular barcodes in toxinological research. Toxicon, 46(6), 709-710.

DasGupta, B., Konwar, K. M., Mandoiu, II, & Shvartsman, A. A. (2005). DNA-BAR: distinguisher selection for DNA barcoding. Bioinformatics, 21(16), 3424-3426.

De Ley, P., De Ley, I. T., Morris, K., Abebe, E., Mundo-Ocampo, M., Yoder, M., et al. (2005). An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1945-1958.

Derycke, S., Rémerie, T., Vierstraete, A., Backeljau, T., Vanfleteren, J., Vinckx, M., et al. (2005). Mitochondrial DNA variation and cryptic speciation within the free-living marine nematode Pellioditis marina. Mar Ecol Prog Ser, 300, 91–103.

DeSalle, R., Egan, M. G., & Siddall, M. (2005). The unholy trinity: taxonomy, species delimitation and DNA barcoding. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1905-1916.

Druzhinina, I. S., Kopchinskiy, A. G., Komon, M., Bissett, J., Szakacs, G., & Kubicek, C. P. (2005). An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. Fungal Genet Biol, 42(10), 813-828.

Ebach, M. C., & Holdredge, C. (2005). DNA barcoding is no substitute for taxonomy. Nature, 434, 697.

Ebach, M. C., & Holdredge, C. (2005). More Taxonomy, Not DNA Barcoding. BioScience, 55(10), 822-823.

Ekrem, T., & Jordal, B. H. (2005). Organismer med strekkoder – artsbestemming med DNA-sekvenser. Naturen, 4, 154-160.

Fitzhugh, K. (2005). The inferential basis of species hypotheses: the solution to defining the term ‘species’. Marine Ecology, 26(3-4).

Floyd, R., Rogers, A. D., Lambshead, P. J. D., & Smith, C. R. (2005). Nematode-specific PCR primers for the 18S small subunit rRNA gene. Molecular Ecology Notes, 5(3), 611-612.

Greenstone, M. H., Rowley, D. L., Heimbach, U., Lundgren, J. G., Pfannenstiel, R. S., & Rehner, S. A. (2005). Barcoding generalist predators by polymerase chain reaction: carabids and spiders. Mol Ecol, 14(10), 3247-3266.

Gregory, T. R. (2005). DNA barcoding does not compete with taxonomy. Nature, 434(7037), 1067.

Hajibabaei, M., deWaard, J. R., Ivanova, N. V., Ratnasingham, S., Dooh, R. T., Kirk, S. L., et al. (2005). Critical factors for assembling a high volume of DNA barcodes. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1959-1967.

Hasbun, C. R., Gomez, A., Kohler, G., & Lunt, D. H. (2005). Mitochondrial DNA phylogeography of the Mesoamerican spiny-tailed lizards (Ctenosaura quinquecarinata complex): historical biogeography, species status and conservation. Mol Ecol, 14(10), 3095-3107.

Hebert, P. D. N., & Barrett, R. D. H. (2005). Reply to the comment by L Prendini on ‘Identifying spiders through DNA barcodes’. Can Journal of Zoology, 83, 505-506.

Hebert, P. D. N., & Gregory, T. R. (2005). The promise of DNA barcoding for taxonomy. Syst Biol, 54(5), 852-859.

Hille, A., Miller, M. A., & Erlacher, S. (2005). DNA sequence variation at the mitochondrial cytochrome oxidase I subunit among pheromotypes of the sibling taxa Diachrysia chrysitis and D.tutti (Lepidoptera: Noctuidae). Zoologica Scripta, 34(1).

Hurst, G. D. D., & Jiggins, F. M. (2005). Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts. Proceedings of the Royal Society B: Biological Sciences, 272(1572), 1525-1534.

Janzen, D. H. (2005). How to conserve wild plants? Give the world the power to read them. Forward, Plant conservation: a natural history approach, eds. , Krupnick, G. and Kress, J., University of Chicago Press, Chicago, 346 pp.

Janzen, D. H., Hajibabaei, M., Burns, J. M., Hallwachs, W., Remigio, E., & Hebert, P. D. (2005). Wedding biodiversity inventory of a large and complex Lepidoptera fauna with DNA barcoding. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1835-1845.

Jolivet, P. (2005). Nomenclature and Nomenklatura. Taxonomy, Taxinomy or Systematics. Nouvelle Revue d’Entomologie, 22(4), 355-360.

Koljalg, U., Larsson, K. H., Abarenkov, K., Nilsson, R. H., Alexander, I. J., Eberhardt, U., et al. (2005). UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi. New Phytol, 166(3), 1063-1068.

Kosiak, E. B., Holst-Jensen, A., Rundberget, T., Gonzalez Jaen, M. T., & Torp, M. (2005). Morphological, chemical and molecular differentiation of Fusarium equiseti isolated from Norwegian cereals. Int J Food Microbiol, 99(2), 195-206.

Kress, W. J., Wurdack, K. J., Zimmer, E. A., Weigt, L. A., & Janzen, D. H. (2005). Use of DNA barcodes to identify flowering plants. Proc Natl Acad Sci U S A, 102(23), 8369-8374.

Kristensen, R., Torp, M., Kosiak, B., & Holst-Jensen, A. (2005). Phylogeny and toxigenic potential is correlated in Fusarium species as revealed by partial translation elongation factor 1 alpha gene sequences. Mycol Res, 109(Pt 2), 173-186.

Lambert, D. M., Baker, A., Huynen, L., Haddrath, O., Hebert, P. D., & Millar, C. D. (2005). Is a large-scale DNA-based inventory of ancient life possible? J Hered, 96(3), 279-284.

Lobl, I., & Leschen, R. A. B. (2005). Demography of coleopterists and their thoughts on DNA barcoding and the phylocode, with commentary. The Coleopterists Bulletin, 59(3), 284-292.

Lorenz, J. G., Jackson, W. E., Beck, J. C., & Hanner, R. (2005). The problems and promise of DNA barcodes for species diagnosis of primate biomaterials. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1869-1877.

Markmann, M., & Tautz, D. (2005). Reverse taxonomy: an approach towards determining the diversity of meiobenthic organisms based on ribosomal RNA signature sequences. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1917-1924.

Marshall, E. (2005). Taxonomy. Will DNA bar codes breathe life into classification? Science, 307(5712), 1037.

Matz, M. V., & Nielsen, R. (2005). A likelihood ratio test for species membership based on DNA sequence data. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1969-1974.

Meyer, C. P., & Paulay, G. (2005). DNA barcoding: error rates based on comprehensive sampling. PLoS Biol, 3(12), e422.

Milankov, V., Stamenkovic, J., Ludoski, J., Ståhls, G., & Vujic, A. (2005). Diagnostic molecular markers and the genetic relationships among three species of the Cheilosia canicularis group (Diptera: Syrphidae). European Journal of Entomology, 102, 125-131.

Miller, K. B., Alarie, Y., Wolfe, G. W., & Whiting, M. F. (2005). Association of insect life stages using DNA sequences: the larvae of Philodytes umbrinus (Motschulsky) (Coleoptera: Dytiscidae). Systematic Entomology, 30(4).

Monaghan, M. T., Balke, M., Gregory, T. R., & Vogler, A. P. (2005). DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1925-1933.

Nicolaisen, M., Justesen, A. F., Thrane, U., Skouboe, P., & Holmstrom, K. (2005). An oligonucleotide microarray for the identification and differentiation of trichothecene producing and non-producing Fusarium species occurring on cereal grain. J Microbiol Methods, 62(1), 57-69.

Nilsson, R. H., Kristiansson, E., Ryberg, M., & Larsson, K. H. (2005). Approaching the taxonomic affiliation of unidentified sequences in public databases–an example from the mycorrhizal fungi. BMC Bioinformatics, 6, 178.

Pinceel, J., Jordaens, K., & Backeljau, T. (2005). Extreme mtDNA divergences in a terrestrial slug (Gastropoda, Pulmonata, Arionidae): accelerated evolution, allopatric divergence and secondary contact. Journal of Evolutionary Biology, 18(5), 1264-1280.

Pinceel, J., Jordaens, K., Van Houtte, N., Bernon, G., & Backeljau, T. (2005). Population genetics and identity of an introduced terrestrial slug: Arion subfuscus s.l. in the North-East USA (Gastropoda, Pulmonata, Arionidae). Genetica, 125(2-3), 155-171.

Pook, C. E., & McEwing, R. (2005). Mitochondrial DNA sequences from dried snake venom: a DNA barcoding approach to the identification of venom samples. Toxicon, 46(7), 711-715.

Prendini, L. (2005). Comments on ‘Identifying spiders through DNA barcodes’. Canadian Journal of Zoology, 83(3), 498-504.

Saunders, G. W. (2005). Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1879-1888.

Savolainen, V., Cowan, R. S., Vogler, A. P., Roderick, G. K., & Lane, R. (2005). Towards writing the encyclopedia of life: an introduction to DNA barcoding. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1805-1811.

Schander, C., & Willassen, E. (2005). What can biological barcoding do for marine biology? Marine Biology Research, 1, 79-83.

Schindel, D. E., & Miller, S. E. (2005). DNA barcoding a useful tool for taxonomists. Nature, 435(7038), 17.

Siddall, M. E., & Budinoff, R. B. (2005). DNA-barcoding evidence for widespread introductions of a leech from the South AmericanHelobdella triserialis complex Conservation Genetics, 6(3), 467-472.

Smith, M. A., Fisher, B. L., & Hebert, P. D. (2005). DNA barcoding for effective biodiversity assessment of a hyperdiverse arthropod group: the ants of Madagascar. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1825-1834.

Smith, V. S. (2005). DNA barcoding: perspectives from a “Partnerships for Enhancing Expertise in Taxonomy” (PEET) debate. Syst Biol, 54(5), 841-844.

Steinke, D., Vences, M., Salzburger, W., & Meyer, A. (2005). TaxI: a software tool for DNA barcoding using distance methods. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1975-1980.

Summerbell, R. C., Levesque, C. A., Seifert, K. A., Bovers, M., Fell, J. W., Diaz, M. R., et al. (2005). Microcoding: the second step in DNA barcoding. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1897-1903.

Thomas, M., Raharivololoniaina, L., Glaw, F., Vences, M., & Vieites, D. R. (2005). Montane Tadpoles in Madagascar: Molecular Identification and Description of the Larval Stages of Mantidactylus elegans, Mantidactylus madecassus, and Boophis laurenti from the Andringitra Massif. Copeia, 2005(1), 174-183.

Van Riel, P., Jordaens, K., Van Houtte, N., Martins, A. M., Verhagen, R., & Backeljau, T. (2005). Molecular systematics of the endemic Leptaxini (Gastropoda: Pulmonata) on the Azores islands. Mol Phylogenet Evol, 37(1), 132-143.

Vences, M., Thomas, M., Bonett, R. M., & Vieites, D. R. (2005). Deciphering amphibian diversity through DNA barcoding: chances and challenges. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1859-1868.

Vences, M., Thomas, M., van der Meijden, A., Chiari, Y., & Vieites, D. R. (2005). Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians. Front Zool, 2(1), 5.

Verbruggen, H., De Clerck, O., Kooistra, W. H. C. F., & Coppejans, E. (2005). Molecular and Morphometric Data Pinpoint Species Boundaries in Halimeda Section Rhipsalis (Bryopsidales, Chlorophyta)1. Journal of Phycology, 41(3).

Voigt, K., Cozijnsen, A. J., Kroymann, J., Pöggeler, S., & Howlett, B. J. (2005). Phylogenetic relationships between members of the crucifer pathogenic Leptosphaeria maculans species complex as shown by mating type (MAT1-2), actin, and [beta]-tubulin sequences. Molecular Phylogenetics and Evolution, 37(2), 541-557.

Ward, R. D., Zemlak, T. S., Innes, B. H., Last, P. R., & Hebert, P. D. (2005). DNA barcoding Australia’s fish species. Philos Trans R Soc Lond B Biol Sci, 360(1462), 1847-1857.

Wheeler, Q. D. (2005). Losing the plot: DNA “barcodes” and taxonomy. Cladistics, 21(4), 405-407.

Whinnett, A., Brower, A. V. Z., Lee, M.-M., Willmott, K. R., & Mallet, J. (2005). Phylogenetic Utility of Tektin, a Novel Region for Inferring Systematic Relationships Among Lepidoptera. Annals of the Entomological Society of America, 98(6), 873-886.

Whinnett, A., Zimmermann, M., Willmott, K. R., Herrera, N., Mallarino, R., Simpson, F., et al. (2005). Strikingly variable divergence times inferred across an Amazonian butterfly ‘suture zone’. Proc Biol Sci, 272(1580), 2525-2533.

Will, K. W., Mishler, B. D., & Wheeler, Q. D. (2005). The perils of DNA barcoding and the need for integrative taxonomy. Syst Biol, 54(5), 844-851.

Willassen, E. (2005). New species of Diamesa (Diptera: Chironomidae) from Tibet: conspecific males and females associated with mitochondrial DNA. Zootaxa, 1049, 19-32.




Aridgides, L. J., Doblin, M. A., Berke, T., Dobbs, F. C., Matson, D. O., & Drake, L. A. (2004). Multiplex PCR allows simultaneous detection of pathogens in ships’ ballast water. Marine Pollution Bulletin, 48, 1096-1101.

Arne Holst-Jensen, T. V. T. S. (2004). On reliability. New Phytologist, 161(1), 11-13.

Blaxter, M., Elsworth, B., & Daub, J. (2004). DNA taxonomy of a neglected animal phylum: an unexpected diversity of tardigrades. Proc Biol Sci, 271 Suppl 4, S189-192.

Blaxter, M. L. (2004). The promise of a DNA taxonomy. Philos Trans R Soc Lond B Biol Sci, 359(1444), 669-679.

DeSalle, R., & Amato, G. (2004). The expansion of conservation genetics. Nat Rev Genet, 5(9), 702-712.

Fliegerova, K., Hodrova, B., & Voigt, K. (2004). Classical and molecular approaches as a powerful tool for the characterization of rumen polycentric fungi. Folia Microbiol (Praha), 49(2), 157-164.

Hebert, P. D. N., Penton, E. H., Burns, J. M., Janzen, D. H., & Hallwachs, W. (2004). Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proc Natl Acad Sci U S A, 101(41), 14812-14817.

Hebert, P. D. N., Stoeckle, M. Y., Zemlak, T. S., & Francis, C. M. (2004). Identification of Birds through DNA Barcodes. PLoS Biol, 2(10), e312.

Hogg, I. D., & Hebert, P. D. N. (2004). Biological identifications of springtails (Hexapoda:Collembola) from the Canadian arctic, using mitochondrial barcodes. Can Journal of Zoology, 82, 749-754.

Holst-Jensen, A., Vralstad, T., & Schumacher, T. (2004). Kohninia linnaeicola, a new genus and species of the Sclerotiniaceae pathogenic to Linnaea borealis. Mycologia, 96(1), 135-142.

Janzen, D. H. (2004). Now is the time. Philos Trans R Soc Lond B Biol Sci, 359(1444), 731-732.

Lee, M. S. Y. (2004). The Molecularisation of Taxonomy. Invertebrate Systematics, 18, 1-6.

Lee, T., & Foighil, D. (2004). Hidden Floridian biodiversity: mitochondrial and nuclear gene trees reveal four cryptic species within the scorched mussel, Brachidontes exustus, species complex. Molecular Ecology, 13(11).

Meland, K., & Willassen, E. (2004). Molecular phylogeny and biogeography of the genus Pseudomma (Peracarida: Mysida). Journal of Crustacean Biology, 24(4), 541-557.

Moritz, C., & Cicero, C. (2004). DNA barcoding: promise and pitfalls. PLoS Biol, 2(10), e354.

Paquin, P., & Hedin, M. (2004). The power and perils of ‘molecular taxonomy’: a case study of eyeless and endangered Cicurina (Araneae: Dictynidae) from Texas caves. Molecular Ecology, 13(10).

Pfunder, M., Holzgang, O., & Frey, J. E. (2004). Development of microarray-based diagnostics of voles and shrews for use in biodiversity monitoring studies, and evaluation of mitochondrial cytochrome oxidase I vs. cytochrome b as genetic markers. Molecular Ecology, 13(5).

Powers, T. (2004). Nematode molecular diagnostics: from bands to barcodes. Annu Rev Phytopathol, 42, 367-383.

Rodrigues JCV, Childers CC, Gallo-Meagher M, Ochoa R, Adams BJ (2004) Mitochondrial DNA and RAPD polymorphisms in the haploid mite Brevipalpus phoenicis (Acari: Tenuipalpidae) Experimental and Applied Acarology 34: 274-290 | LINK

Rubinoff, D., & Sperling, F. A. H. (2004). Mitochondrial DNA sequence, morphology and ecology yield contrasting conservation implications for two threatened buckmoths (Hemileuca: Saturniidae). Biological Conservation 118(3), 341-351.

Wheeler, Q. D. (2004). Taxonomic triage and the poverty of phylogeny. Philos Trans R Soc Lond B Biol Sci, 359(1444), 571-583.

Whiteman, N. K., Santiago-Alarcon, D., Johnson, K. P., & Parker, P. G. (2004). Differences in straggling rates between two genera of dove lice (Insecta: Phthiraptera) reinforce population genetic and cophylogenetic patterns. Int J Parasitol, 34(10), 1113-1119.

Will, K. W., & Rubinoff, D. (2004). Myth of the molecule: DNA barcodes for species cannot replace morphology for identification and classification. Cladistics, 20(1).




Baker, C. S., Dalebout, M. L., Lavery, S., & Ross, H. A. (2003). www.DNA-surveillance: applied molecular taxonomy for species conservation and discovery. Trends in Ecology and Evolution, 18(6), 271-272.

Besansky, N. J., Severson, D. W., & Ferdig, M. T. (2003). DNA barcoding of parasites and invertebrate disease vectors: what you don’t know can hurt you. Trends Parasitol, 19(12), 545-546.

Blaxter, M. (2003). Molecular systematics: Counting angels with DNA. Nature, 421(6919), 122-124.

Blaxter, M., & Floyd, R. (2003). Molecular taxonomics for biodiversity surveys: already a reality. Trends in Ecology & Evolution, 18(6), 268-269.

Brown, J. W., Miller, S. E., & Horak, M. (2003). Studies on New Guinea moths. 2. Description of a new species of Xenothictis Meyrick (Lepidoptera: Tortricidae: Archipini). Proceedings of the Entomological Society of Washington, 105(4), 1043-1050.

Einax, E., & Voigt, K. (2003). Oligonucleotide primers for the universal amplification of [beta]-tubulin genes facilitate phylogenetic analyses in the regnum Fungi. Organisms Diversity & Evolution, 3(3), 185-194.

Eyualem, A., & Blaxter, M. (2003). Comparison of biological, molecular and morphological methods of species identification in a set of cultured Panagrolaimus isolates. Journal of Nematology, 35(1), 119-128.

Hebert, P. D. N., Cywinska, A., Ball, S. L., & deWaard, J. R. (2003). Biological identifications through DNA barcodes. Proc Biol Sci, 270(1512), 313-321.

Hebert, P. D. N., Ratnasingham, S., & deWaard, J. R. (2003). Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc Biol Sci, 270 Suppl 1, S96-99.

Holland, N. T., Smith, M. T., Eskenazi, B., & Bastaki, M. (2003). Biological sample collection and processing for molecular epidemiological studies. Mutat Res, 543(3), 217-234.

Justesen, A. F., Yohalem, D., Bay, A., & Nicolaisen, M. (2003). Genetic diversity in potato field populations of Thanatephorus cucumeris AG-3, revealed by ITS polymorphism and RAPD markers. Mycol Res, 107(Pt 11), 1323-1331.

Kottke, I., Beiter, A., Weiss, M., Haug, I., Oberwinkler, F., & Nebel, M. (2003). Heterobasidiomycetes form symbiotic associations with hepatics: Jungermanniales have sebacinoid mycobionts while Aneura pinguis (Metzgeriales) is associated with a Tulasnella species. Mycological Research, 107(8), 957-968.

Lipscomb, D., Platnick, N., & Wheeler, Q. (2003). The intellectual content of taxonomy: A comment on DNA taxonomy. Trends in Ecology and Evolution, 18(2), 65-66.

Mallet, J., & Willmott, K. (2003). Taxonomy: Renaissance or Tower of Babel? Trends in Ecology and Evolution, 18(2), 57-59.

Proudlove, G., & Wood, P. J. (2003). The blind leading the blind: cryptic subterranean species and DNA taxonomy. Trends in Ecology and Evolution, 18(6), 272-273.

Remigio, E. A., & Hebert, P. D. N. (2003). Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships. Mol Phylogenet Evol, 29(3), 641-647.

Seberg, O., Humphries, C. J., Knapp, S., Stevenson, D. W., Peterson, G., Scharff, N., et al. (2003). Shortcuts in systematics? A commentary on DNA-based taxonomy. Trends in Ecology and Evolution, 18(2), 63-65.

Yohalem, D. S., Nielsen, K., & Nicolaisen, M. (2003). Taxonomic and nomenclatural clarification of the onion neck rotting Botrytis species. Mycotaxon, 85, 175-182.




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